ZMP
zgc:113125
Ensembl ID:
ZFIN ID:
Description:
Zgc:113125 [Source:UniProtKB/TrEMBL;Acc:Q5CZT6]
Human Orthologue:
SNX13
Human Description:
sorting nexin 13 [Source:HGNC Symbol;Acc:21335]
Mouse Orthologue:
Snx13
Mouse Description:
sorting nexin 13 Gene [Source:MGI Symbol;Acc:MGI:2661416]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa23409 | Nonsense | Available for shipment | Available now |
| sa16799 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa23409
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000020497 | Nonsense | 417 | 961 | 12 | 25 |
| ENSDART00000063615 | None | None | 228 | None | 8 |
Genomic Location (Zv9):
Chromosome 19 (position 2210219)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 2116225 |
| GRCz11 | 19 | 2083295 |
KASP Assay ID:
2261-2769.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGATTCTGTTCTTCTGGCTGACGGTGGAGGGCTATCGGGTGACAGCACAG[C/T]AGCAGCTGGAGGTCCTACAGAGCTGTCAGAGAGATGGCAAGAGGCAGAGC
Long Flanking Sequence:
GGACATAACACAAAATTTAAATCAAGTAATCAAGCATGTCAACGTCAAATTTATGCATATAAAATATATTGTCCCTACAACAAAATTGTGGCTAGTGAAAATACAGAATGGCTAGTAACATTGGAAAACTACTAGCCACAGTGGCCGGTGATTAAAAAAGTTAACGTAAAGCCCTGATTATAAGATGTTAAAAACAGCTCCTTCTGCTGCTTTGCAAACTGATATTTTCTTCTGATATGATTCTTCTATTTATTTATAGTCGTGAACACACGTTTTTATAGAGCAGGTAGTTTGATCGTCTATCATTCATTGTCATTTCTCTCATGGGCAACTGAACGGAAGTTCTAAAACTATTACAAACATGAGCACTCCTAATTATCAGCATAATAATCTCAACCCTCCACCATTTGTATGTTTGTCTAGACTACATGCAGTGCATGGGTGGGCAGGCGATTCTGTTCTTCTGGCTGACGGTGGAGGGCTATCGGGTGACAGCACAG[C/T]AGCAGCTGGAGGTCCTACAGAGCTGTCAGAGAGATGGCAAGAGGCAGAGCAGTCAGACCACTAAAGGACTGCTCAGAGCTGCAGCACTGGGGGTCTTCGACCAGTACCTGTCTGAGAAGGTGAGAGCAGTCACATTTACAATAGGTTACAATAAATGAAAGAGTTCATATCATGTGCTATTCTGGGAATGAGCTACAAGCACAGCAAGTGTTTTTCAGCAAACAGTTATCTTCCTGAAAGGTTAATGTGACTATTTTCAGGTTTCTTTTACAGCATCCGTCAAATAGATCTAAGCGTTAATTTAGCTGTTCAAGTGTAAAACAAGATGCACGAGCACCGTCAGGAACATCAGGCCAGTGTCTAAACTCCATTGAAAATGCTGTGGTAAAATAAATGTCCATATTTTAAAGGCATGGAGGGGAAAATTGAATCTGAAGCAGTGCATCTTGTCCGTTCTGAGACCCACTTTATATCGTATATCAATCAGGCAGTGAAGATCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16799
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000020497 | Nonsense | 851 | 961 | 24 | 25 |
| ENSDART00000063615 | Nonsense | 118 | 228 | 7 | 8 |
Genomic Location (Zv9):
Chromosome 19 (position 2193453)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 2099459 |
| GRCz11 | 19 | 2066529 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTTTTGTCTTCTGATTGGTGTTTTTTTGACTMTGCAGAGACTCTTATTG[G/A]CCGAACGGGATCCTGGCCGAGACGCCACCCCGCAGAGACAAAAACCTSCG
Long Flanking Sequence:
CAAGAACAATATTGGTACTCATTTCAAATCTAATCTCAGTTATTTTAGGTCATAAAAGACAAACAAATAGATATTTAAAAAGATAAATGTACAGAACAATCATCATGCCTTGTCATATTTTAATGAACAACACTTTTTATTTTGAATAAGCTATGTGTTTCATTTAGATGTGTTTTTAACTGATTTATTAACACCTGTATGTATTTTAGTGTTTATTTGAAATAGCTTTGTCATTCATAAACCCTTAGTAATTTATTCAGAGAACCTTATAAACAAGGAATCTGAAAAGTAAATAATTGAATAATGAGCATGTATTTCGTCTCATGGCAGGAAAATCGTAGATCACGTGGACAACATGACGTCTCCTGAGCAGGTGTCTGATTACGTGAAGAGATTCAGGTGAGGGTTTCACACATGCGTTTGTTGTATGGTCTGAAATGTTTGTGGCTCTGTTTTGTCTTCTGATTGGTGTTTTTTTGACTCTGCAGAGACTCTTATTG[G/A]CCGAACGGGATCCTGGCCGAGACGCCACCCCGCAGAGACAAAAACCTGCGCATGAGGACACGGGTCGCTGCCAAAACCACACTCCTGGGAATCATGCCAGGTACACATACACACTTCAGCACGAGTCTGTAGCACAGAATATGCTGTTTTTGTGCACTTTCAGCATCGGTGATAGTAAAAAATATGTATTAAAATATAAAAAAAAAAATACTACAGAAGTCAATGGTTACCGGTTTCCAACATCATTCTGTTAAACACAAAGGATATTTTGAAAAATGTTGGAAACCTGTAACCATTGACTGTTTATAGTAAGAAAAAAAACTAAAGAAGTCAATGGTTACCGGTTTCCAATTTTATTCTGTTAAACACAAAAGAAGATATTTTGAAAAATGTTGGAAACCTGTAACCATTGACTGTTTATAGTAAGAAAAAATACTAAAGAAGTCAATAGTTACCGGTTTCCAATTTTATTCTGTTAAACACAAAAGAAGATACTTTTT
Associated Phenotype:
Not determined