ZMP
si:ch211-11i5.2
Ensembl ID:
ZFIN ID:
Human Orthologue:
CCDC21
Human Description:
coiled-coil domain containing 21 [Source:HGNC Symbol;Acc:25309]
Mouse Orthologue:
Ccdc21
Mouse Description:
coiled-coil domain containing 21 Gene [Source:MGI Symbol;Acc:MGI:1917262]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa16783 | Nonsense | Available for shipment | Available now |
sa12327 | Nonsense | Available for shipment | Available now |
sa36226 | Essential Splice Site | Available for shipment | Available now |
sa32107 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa16783
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000084610 | Nonsense | 361 | 746 | 5 | 12 |
ENSDART00000138798 | Nonsense | 378 | 763 | 7 | 14 |
The following transcripts of ENSDARG00000060215 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 44470268)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 41750776 |
GRCz11 | 16 | 41700808 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TNNNNNTAATCTGTTTCTTTTCATYACTCTGTTTGTGACAGGAAGCACAR[C/T]GAGARAACGCATTCTTGCGAGCCCAGTTTGCCGAGCGCAACAACTGCTTT
Long Flanking Sequence:
TTTGACTATAGCCCTACATTTGTGTTCTCGTTACACACACATAGTCATTTACACTCATCAAACCATTTATTTTTCAATCGCAGTTAATGACTGGAGGAAGTGGACAGTACTTGCCACTATATCCATCAGCTGCTCACACAGAGAACAGCAAGTGGGATGCAGTCATTAAAGCCAACGAGAACTTACTGAAAGATAAAGAACTCACTATTGAAAGGTACGTTTTTAGTAGCTTCTTTTGTTTCAAAGATTGAAAACTTGTGCTAAATGTATGAACTGTTGCATTGCAGACAGAAGCAGCAGATGTCTCAGCTGGAGCAGCGTCTCAGAGAGAGTGAGCTGCAGGTGCACAGCGCCCTCATGGGACGGGGAGCTCCTTACACTGATGTGTGCCTGTTGAGACTACAGGTTAGCACACATGCATTCATAGACCTTTCCTTTATGTACATTAACTCCTCTTAATCTGTTTCTTTTCATCACTCTGTTTGTGACAGGAAGCACAA[C/T]GAGAAAACGCATTCTTGCGAGCCCAGTTTGCCGAGCGCAACAACTGCTTTACCAAGGATAAGCTAGAAGCAGACCGGAGACTGGGAGCGGTGGAAACAGAAATGCAACGTCTGAATGAAGTCTTGAAAGAAAGTAGTGAAAAACATGCAGAGGAGCTTAAGAAGCAAGAGGAGAGGGTGAGGATAACCACTTTTCATCACGCAATTTACATCCAGGGTTCCCACACTTCTTGAAAGTTCTTGAATTTCGCACAAATACAGTTAAAGTCAGAATTATTAGCCCCCCTTTGAGCTTTTTTTTTTTTTTTTTTCCTTTTTTAAATATTTCCCAAATTGTTTAACAGAGCAAACAAATTTTCACAGTATGTCTGATAATATTTTTTCTTCTGGAGAAAGTCTTATTTGTTTTATTTCGACTAAAAAAAAAGCAGTTTTTAATTTTTTATAAACCATTTTAAAGTCAAAATTATTAGCCCCTTTAACCTATATTTTCTTTCGATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12327
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000084610 | Nonsense | 443 | 746 | 6 | 12 |
ENSDART00000138798 | Nonsense | 460 | 763 | 8 | 14 |
The following transcripts of ENSDARG00000060215 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 44468715)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 41749223 |
GRCz11 | 16 | 41699255 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACATTAACGGCTTKAAGAAGAAATGCCAGAAAGAGGCGGAACAGAACCGA[G/T]AAAAACAGCAGCGGATTGAGACGCTTGAACGATATCTGGCTGACCTCCCT
Long Flanking Sequence:
AATTTGAGATCTTAAAGAGCAGGTTGGATTGTAGTGAGACAGAAGGTTGGTTAGATAAACAGGAGCTAGATTATTTAAAGCTTTAGAGGCAAGAAGCAATCTTATATAATCAGTCTGGAACTTAGAGAGCCAGTGCAAGGAGGATAAAACTGGGGTGATGTGGTCATATCTTCTTGACCTGGTAGGACTAAAGTTCTTTGAACATAACTTTATTATTACTTTATTTTTAATGTAAATGTTAAGTGTAAGTAAAATGTTACAGCAAGGACTCCCATGGCACTTCATATGCTGGGGTATGAAGTGCTTAATTTAAAATTAATGGTGCTTTTAAAAAGTCCTTGAATCTGCTGTTCATGAAAGCATGGCAACCCTGTACAACATATGACCAGAATCTAAATTTTTCTTTTTTTTTGTTGCTTTTTACTACAAAGATCCGCAGTCGGGACAAGCACATTAACGGCTTGAAGAAGAAATGCCAGAAAGAGGCGGAACAGAACCGA[G/T]AAAAACAGCAGCGGATTGAGACGCTTGAACGATATCTGGCTGACCTCCCTACCATGGAGGACTATCAGGCCCAGCACAAGAAGGTACTGCAGTCTCTGATGGCCAGCCAACACAACTAAAGCCTGTGGTTTCAGAACAATTGCTCATAATGCTCAGCTTGATGCTTCTCTTGTGTTGTGTTGCCAGAGTGTGTTATAGCAACCCCTGCATCCATATATCACACATCTACTCCTATTGTTTTCTTTATCTTAATGAAACACTCTCCCTTCACTGCTGGCTCACAGTTTTTCAGGGGCCCTGATTTCACCTGGTTTTACCACGCGTTTTTAGAGTTTTAAATGCTCCTGTCAGGTGTAAACAGGGCTCAATTTGCAGAGCGTTTATGGTAACACTTTAGCAATCGAAGCACTTTTATCTGCAGCTTTTACTTTTTAATAAACTCCTAATTTACTACTTGATAACAGGCAATGTTACTAATGTAGGGTCCAGCCAGTTGGTCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36226
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000084610 | Essential Splice Site | 561 | 746 | 8 | 12 |
ENSDART00000138798 | Essential Splice Site | 578 | 763 | 10 | 14 |
The following transcripts of ENSDARG00000060215 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 44460679)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 41741187 |
GRCz11 | 16 | 41691219 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCGAGAAGAAAACACTGCACTGAAAGATGAGCAGCAGCGACTCAAAAAG[G/A]TTCTTAGTCAAACTCATTTTTCTTTATTTACACTAGTAATTTAACAGGAA
Long Flanking Sequence:
AAGTTTTTATCCAAGGTTATCATACTGTCATATACTGGCTCATCCCTAATTGTAAATTCTGTAAAAATATTTTACAGTATTATTTTTTATTACACTCTTCAATTCTTGTTCTGATATGCAGTTGTGGTTGTTGTTTTGCAGCTGGAGGAGGTGGAGGAGAGGGCGGCTGAGTTGCAGTCCACGGTCAAAGATCTGGAAGTCCAGCTGGAGGCGGCTCACACTGCTGTACGCAACAAAGAGACACAGCTGGAAGAACAGAGACGCAAGGAGAGAGAACTGCTCACGACAGTCACCAGGTAGGGCAAATGCAGATGACGCCATCGCTGCGAGTCTGCATATAGAAGATTTTTAGGCTTTACTATATGATTGGCTTGTGTTTTAGTCTTCAGAACAGAGTGCAGGAGAGTCTTGAGGATGGAGTGAGGTTGCCCTCCCTTGACATCGAGAAGCTTCGAGAAGAAAACACTGCACTGAAAGATGAGCAGCAGCGACTCAAAAAG[G/A]TTCTTAGTCAAACTCATTTTTCTTTATTTACACTAGTAATTTAACAGGAATTTGTTAATAGTGCAGATGCATGGCTCTACTCATGAATTAATTTGAATAAATTTTCTGTTGAAATATGTTAAGGTACTGGCTTAATTTGTTTTAAGGTTATCGAAAAGCAGCTCAGGATGATGGAGCAGCTTGGCTCACAGATCAGGGTAAAGACTTCATTCAGATAAATTACAATTTATTTTTTCATTTTTGCTATTGACAGACATTAAGTTATACTGTCTAACATTTACACAAGTTTTACATTTGCACTGTACACCATTTTTAAACAAATATCCACTGTCTTCATTTGTTGCTGCTAGTTTTCTGGCATCAGCTTGGTGTCAAAAGGATTCATTCATTTCTTTTCGGCTTAGTCCCTTTATTAATCAGGGTCGCCACAGCAGAATGAATGGTCCAGTTATTATCCAGCATATGTTTTATGCAGCAGATGCCCCCACATGCTTATGCAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32107
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000084610 | Nonsense | 650 | 746 | 11 | 12 |
ENSDART00000138798 | Nonsense | 667 | 763 | 13 | 14 |
The following transcripts of ENSDARG00000060215 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 44458575)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 41739083 |
GRCz11 | 16 | 41689115 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCAGGGCGAGGAGCCATCCAGTGGCTGTGGTTTGCTGCCTGCCGGAGCT[C/T]GACTCACCCAGAGGCTGCATGGAGAGATGGCGGCCTGTCTGTGTGACTTG
Long Flanking Sequence:
ACACCAAGGGTTGCAATCCAATCAAAATAAAAATGGAAAGGCTGTAACTATAAACTACTATTTTTGTCTTTTGTAGGTTGTGGATAAAATATGGTAATTCTAATAGTTTCATAAAATTAATTAGATTTTTGGAAATCACCAAGTGACCCCTCGTTTAGATTATATAATCAAAATACGTTACAACTCTAAACTTGTGTGTTGCTGTAGACTCTGGAGGAGCAGATCTCTCAGGAGGAGTGTATCAGTCAGGCTCTGCGACAGGAGACTGCAGACAAAGAGCAGAATCTCCTGCAGTTACGCAGCGCTATGAAGGAGGTCAGTAGCTGCACATTCAGCACTTTGTCTTTGTGTTTTTATGGTGTACTGGAGAACTGAGGTGCTTGTGTGTCTTTCAGCTCTCAGTGCAGAACCAGGAGCTGATGGAGCATAATCTAACCCTGCAGGAGCGTCTTCAGGGCGAGGAGCCATCCAGTGGCTGTGGTTTGCTGCCTGCCGGAGCT[C/T]GACTCACCCAGAGGCTGCATGGAGAGATGGCGGCCTGTCTGTGTGACTTGCGCTCCCTCTGCAACGTCCTCACGCAGAGGGCTCAGGGCCACGACCCAAACCTCTCCATGCTGCTCGGCATTGCATGTGAGTGCGCCCTCTGCTGTCTGCATACTAGAGAGAACACTAGTTAAAATGGACCTATGATAGGGTAACAGTATAATACATTTTTGACAAGGTAGCATCATATTTAGTTTTTGACAGGAATTGAATATTAGGATGTTATTTAGGAATGGTAGAAGCTCAGCTAAAGAAATGTAAAAAAAAATAAAAAATAAACTAGTAAATATTTTTTAATATAAAATTGCTATATTTATGTAGTGAGTATTAGCTTTGTTTTTATCAGCATATTTCAAATGATCGTCTGTTAGATTAAAACATTTATTTAAAGAGTAAAATTCAAAGTACTAGTTCAATAATGAAAGTAAGTGTGCATGGGGTCAAAATGTAATGTCATTTGA
Associated Phenotype:
Not determined