Busch Lab

ZMP

si:ch211-11i5.2

Ensembl ID:
ENSDARG00000060215
ZFIN ID:
ZDB-GENE-030131-1998
Human Orthologue:
CCDC21
Human Description:
coiled-coil domain containing 21 [Source:HGNC Symbol;Acc:25309]
Mouse Orthologue:
Ccdc21
Mouse Description:
coiled-coil domain containing 21 Gene [Source:MGI Symbol;Acc:MGI:1917262]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa16783 Nonsense Available for shipment Available now
sa12327 Nonsense Available for shipment Available now
sa36226 Essential Splice Site Available for shipment Available now
sa32107 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa16783
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084610 Nonsense 361 746 5 12
ENSDART00000138798 Nonsense 378 763 7 14

The following transcripts of ENSDARG00000060215 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 16 (position 44470268)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 41750776
GRCz11 16 41700808
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TNNNNNTAATCTGTTTCTTTTCATYACTCTGTTTGTGACAGGAAGCACAR[C/T]GAGARAACGCATTCTTGCGAGCCCAGTTTGCCGAGCGCAACAACTGCTTT
Long Flanking Sequence:
TTTGACTATAGCCCTACATTTGTGTTCTCGTTACACACACATAGTCATTTACACTCATCAAACCATTTATTTTTCAATCGCAGTTAATGACTGGAGGAAGTGGACAGTACTTGCCACTATATCCATCAGCTGCTCACACAGAGAACAGCAAGTGGGATGCAGTCATTAAAGCCAACGAGAACTTACTGAAAGATAAAGAACTCACTATTGAAAGGTACGTTTTTAGTAGCTTCTTTTGTTTCAAAGATTGAAAACTTGTGCTAAATGTATGAACTGTTGCATTGCAGACAGAAGCAGCAGATGTCTCAGCTGGAGCAGCGTCTCAGAGAGAGTGAGCTGCAGGTGCACAGCGCCCTCATGGGACGGGGAGCTCCTTACACTGATGTGTGCCTGTTGAGACTACAGGTTAGCACACATGCATTCATAGACCTTTCCTTTATGTACATTAACTCCTCTTAATCTGTTTCTTTTCATCACTCTGTTTGTGACAGGAAGCACAA[C/T]GAGAAAACGCATTCTTGCGAGCCCAGTTTGCCGAGCGCAACAACTGCTTTACCAAGGATAAGCTAGAAGCAGACCGGAGACTGGGAGCGGTGGAAACAGAAATGCAACGTCTGAATGAAGTCTTGAAAGAAAGTAGTGAAAAACATGCAGAGGAGCTTAAGAAGCAAGAGGAGAGGGTGAGGATAACCACTTTTCATCACGCAATTTACATCCAGGGTTCCCACACTTCTTGAAAGTTCTTGAATTTCGCACAAATACAGTTAAAGTCAGAATTATTAGCCCCCCTTTGAGCTTTTTTTTTTTTTTTTTTCCTTTTTTAAATATTTCCCAAATTGTTTAACAGAGCAAACAAATTTTCACAGTATGTCTGATAATATTTTTTCTTCTGGAGAAAGTCTTATTTGTTTTATTTCGACTAAAAAAAAAGCAGTTTTTAATTTTTTATAAACCATTTTAAAGTCAAAATTATTAGCCCCTTTAACCTATATTTTCTTTCGATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12327
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084610 Nonsense 443 746 6 12
ENSDART00000138798 Nonsense 460 763 8 14

The following transcripts of ENSDARG00000060215 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 16 (position 44468715)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 41749223
GRCz11 16 41699255
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACATTAACGGCTTKAAGAAGAAATGCCAGAAAGAGGCGGAACAGAACCGA[G/T]AAAAACAGCAGCGGATTGAGACGCTTGAACGATATCTGGCTGACCTCCCT
Long Flanking Sequence:
AATTTGAGATCTTAAAGAGCAGGTTGGATTGTAGTGAGACAGAAGGTTGGTTAGATAAACAGGAGCTAGATTATTTAAAGCTTTAGAGGCAAGAAGCAATCTTATATAATCAGTCTGGAACTTAGAGAGCCAGTGCAAGGAGGATAAAACTGGGGTGATGTGGTCATATCTTCTTGACCTGGTAGGACTAAAGTTCTTTGAACATAACTTTATTATTACTTTATTTTTAATGTAAATGTTAAGTGTAAGTAAAATGTTACAGCAAGGACTCCCATGGCACTTCATATGCTGGGGTATGAAGTGCTTAATTTAAAATTAATGGTGCTTTTAAAAAGTCCTTGAATCTGCTGTTCATGAAAGCATGGCAACCCTGTACAACATATGACCAGAATCTAAATTTTTCTTTTTTTTTGTTGCTTTTTACTACAAAGATCCGCAGTCGGGACAAGCACATTAACGGCTTGAAGAAGAAATGCCAGAAAGAGGCGGAACAGAACCGA[G/T]AAAAACAGCAGCGGATTGAGACGCTTGAACGATATCTGGCTGACCTCCCTACCATGGAGGACTATCAGGCCCAGCACAAGAAGGTACTGCAGTCTCTGATGGCCAGCCAACACAACTAAAGCCTGTGGTTTCAGAACAATTGCTCATAATGCTCAGCTTGATGCTTCTCTTGTGTTGTGTTGCCAGAGTGTGTTATAGCAACCCCTGCATCCATATATCACACATCTACTCCTATTGTTTTCTTTATCTTAATGAAACACTCTCCCTTCACTGCTGGCTCACAGTTTTTCAGGGGCCCTGATTTCACCTGGTTTTACCACGCGTTTTTAGAGTTTTAAATGCTCCTGTCAGGTGTAAACAGGGCTCAATTTGCAGAGCGTTTATGGTAACACTTTAGCAATCGAAGCACTTTTATCTGCAGCTTTTACTTTTTAATAAACTCCTAATTTACTACTTGATAACAGGCAATGTTACTAATGTAGGGTCCAGCCAGTTGGTCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36226
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084610 Essential Splice Site 561 746 8 12
ENSDART00000138798 Essential Splice Site 578 763 10 14

The following transcripts of ENSDARG00000060215 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 16 (position 44460679)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 41741187
GRCz11 16 41691219
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCGAGAAGAAAACACTGCACTGAAAGATGAGCAGCAGCGACTCAAAAAG[G/A]TTCTTAGTCAAACTCATTTTTCTTTATTTACACTAGTAATTTAACAGGAA
Long Flanking Sequence:
AAGTTTTTATCCAAGGTTATCATACTGTCATATACTGGCTCATCCCTAATTGTAAATTCTGTAAAAATATTTTACAGTATTATTTTTTATTACACTCTTCAATTCTTGTTCTGATATGCAGTTGTGGTTGTTGTTTTGCAGCTGGAGGAGGTGGAGGAGAGGGCGGCTGAGTTGCAGTCCACGGTCAAAGATCTGGAAGTCCAGCTGGAGGCGGCTCACACTGCTGTACGCAACAAAGAGACACAGCTGGAAGAACAGAGACGCAAGGAGAGAGAACTGCTCACGACAGTCACCAGGTAGGGCAAATGCAGATGACGCCATCGCTGCGAGTCTGCATATAGAAGATTTTTAGGCTTTACTATATGATTGGCTTGTGTTTTAGTCTTCAGAACAGAGTGCAGGAGAGTCTTGAGGATGGAGTGAGGTTGCCCTCCCTTGACATCGAGAAGCTTCGAGAAGAAAACACTGCACTGAAAGATGAGCAGCAGCGACTCAAAAAG[G/A]TTCTTAGTCAAACTCATTTTTCTTTATTTACACTAGTAATTTAACAGGAATTTGTTAATAGTGCAGATGCATGGCTCTACTCATGAATTAATTTGAATAAATTTTCTGTTGAAATATGTTAAGGTACTGGCTTAATTTGTTTTAAGGTTATCGAAAAGCAGCTCAGGATGATGGAGCAGCTTGGCTCACAGATCAGGGTAAAGACTTCATTCAGATAAATTACAATTTATTTTTTCATTTTTGCTATTGACAGACATTAAGTTATACTGTCTAACATTTACACAAGTTTTACATTTGCACTGTACACCATTTTTAAACAAATATCCACTGTCTTCATTTGTTGCTGCTAGTTTTCTGGCATCAGCTTGGTGTCAAAAGGATTCATTCATTTCTTTTCGGCTTAGTCCCTTTATTAATCAGGGTCGCCACAGCAGAATGAATGGTCCAGTTATTATCCAGCATATGTTTTATGCAGCAGATGCCCCCACATGCTTATGCAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32107
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084610 Nonsense 650 746 11 12
ENSDART00000138798 Nonsense 667 763 13 14

The following transcripts of ENSDARG00000060215 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 16 (position 44458575)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 41739083
GRCz11 16 41689115
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCAGGGCGAGGAGCCATCCAGTGGCTGTGGTTTGCTGCCTGCCGGAGCT[C/T]GACTCACCCAGAGGCTGCATGGAGAGATGGCGGCCTGTCTGTGTGACTTG
Long Flanking Sequence:
ACACCAAGGGTTGCAATCCAATCAAAATAAAAATGGAAAGGCTGTAACTATAAACTACTATTTTTGTCTTTTGTAGGTTGTGGATAAAATATGGTAATTCTAATAGTTTCATAAAATTAATTAGATTTTTGGAAATCACCAAGTGACCCCTCGTTTAGATTATATAATCAAAATACGTTACAACTCTAAACTTGTGTGTTGCTGTAGACTCTGGAGGAGCAGATCTCTCAGGAGGAGTGTATCAGTCAGGCTCTGCGACAGGAGACTGCAGACAAAGAGCAGAATCTCCTGCAGTTACGCAGCGCTATGAAGGAGGTCAGTAGCTGCACATTCAGCACTTTGTCTTTGTGTTTTTATGGTGTACTGGAGAACTGAGGTGCTTGTGTGTCTTTCAGCTCTCAGTGCAGAACCAGGAGCTGATGGAGCATAATCTAACCCTGCAGGAGCGTCTTCAGGGCGAGGAGCCATCCAGTGGCTGTGGTTTGCTGCCTGCCGGAGCT[C/T]GACTCACCCAGAGGCTGCATGGAGAGATGGCGGCCTGTCTGTGTGACTTGCGCTCCCTCTGCAACGTCCTCACGCAGAGGGCTCAGGGCCACGACCCAAACCTCTCCATGCTGCTCGGCATTGCATGTGAGTGCGCCCTCTGCTGTCTGCATACTAGAGAGAACACTAGTTAAAATGGACCTATGATAGGGTAACAGTATAATACATTTTTGACAAGGTAGCATCATATTTAGTTTTTGACAGGAATTGAATATTAGGATGTTATTTAGGAATGGTAGAAGCTCAGCTAAAGAAATGTAAAAAAAAATAAAAAATAAACTAGTAAATATTTTTTAATATAAAATTGCTATATTTATGTAGTGAGTATTAGCTTTGTTTTTATCAGCATATTTCAAATGATCGTCTGTTAGATTAAAACATTTATTTAAAGAGTAAAATTCAAAGTACTAGTTCAATAATGAAAGTAAGTGTGCATGGGGTCAAAATGTAATGTCATTTGA
Associated Phenotype:
Not determined