ZMP
si:ch211-232k3.6
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC559721 [Source:RefSeq peptide;Acc:NP_001139043]
Human Orthologue:
CHST3
Human Description:
carbohydrate (chondroitin 6) sulfotransferase 3 [Source:HGNC Symbol;Acc:1971]
Mouse Orthologue:
Chst3
Mouse Description:
carbohydrate (chondroitin 6/keratan) sulfotransferase 3 Gene [Source:MGI Symbol;Acc:MGI:1858224]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa1677 | Nonsense | Available for shipment | Available now |
| sa12150 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa1677
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000086711 | Nonsense | 355 | 416 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 13 (position 29744268)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 29390216 |
| GRCz11 | 13 | 29520666 |
KASP Assay ID:
554-1623.1 (used for ordering genotyping assays)
KASP Sequence:
AGGGACTGGATCCTCAAGAACACACACGCATCAGAAGCAAACGGAGTSTA[T/A]TCAACCCAAAAAAACTCTTCAGAACAAGTGGAGAAATGGCGRCTCAGTAT
Long Flanking Sequence:
TGCAAGACAAGACGTTGTGGGCCTCTTAATTTGACCATGGCGTCCGAGGCTTGTCTAGCAAAACATCACAGGGTGATCAAAACAGTTAGAGTACGTCAACTAGACACACTCCGTTCTCTAGTAGAGGACCCTCGGCTGGATGTCAAACTCATACAGCTTGTGCGAGACCCTCGAGCTATCCTGGCTTCGAGGATGGTGGCGTTTGCTGGCAAGTACCAGAACTGGAAAAGTTGGGCTGTCAATGGGGAAGTGCCAATAGAGGATGAAGAGGTTAAGCGTCTTGAAGGAAATTGTAACAATATCCGAATCTCCGCCGAGCTGGGCTTAAGTCAACCCAAATGGTTGAAAAAACGCTATATGTTGGTACGTTATGAGGATATCGCCCGGTACCCCATGCAGAAAGCAGCAGAAATGTACAATTTCACAGGCATCCCGATGACGACACAAGCAAGGGACTGGATCCTCAAGAACACACACGCATCAGAAGCAAACGGAGTCTA[T/A]TCAACCCAAAAAAACTCTTCAGAACAAGTGGAGAAATGGCGGCTCAGTATACCATTCAAACTTGCACAAGTTGTACAAAAAGTCTGTGGACCGACCATGAAACTTTTTGGGTACAGGTTTATAGACAGTGAACAAACACTTTTAAACAAATCTTTCAGTGTGCTGGAAGAAAAGCAATTCATTTAGTCCTGAATTGTTTTTGAATTGGTTAAGGAAAACCAAGCATGAATTGCTATATGCATAGCAGACACACACTGGCACAATGTAGCACACTGGGACATTGCTTAAGTCCAAAGTATACTTCATTTTTATATATGCTTGCGGGGCAGGGCTCCAGACTAACTTTTGAGAGCAGTGGCACTGGTGCTGCTAAGCTCTACAGATAATGACACAAACACCAGATTTGTTAGTGCTGCATGTAATTGTAATTACAAGTTTTGTCTCTTAGAAATACACATTTAACAGTAGACTGAGTTAAGAGCTAAAATCCAGATATACAC
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa12150
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000086711 | Nonsense | 414 | 416 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 13 (position 29744443)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 29390391 |
| GRCz11 | 13 | 29520841 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACAGTGAACAAACACTTTTAAACAAATCTTTCAGTGTGCTGGAAGAAAAG[C/T]AATTCATTTAGTCCTGAATTGTTTTTGAATTGGTTAAGGAAAACCAAGCA
Long Flanking Sequence:
CTATCCTGGCTTCGAGGATGGTGGCGTTTGCTGGCAAGTACCAGAACTGGAAAAGTTGGGCTGTCAATGGGGAAGTGCCAATAGAGGATGAAGAGGTTAAGCGTCTTGAAGGAAATTGTAACAATATCCGAATCTCCGCCGAGCTGGGCTTAAGTCAACCCAAATGGTTGAAAAAACGCTATATGTTGGTACGTTATGAGGATATCGCCCGGTACCCCATGCAGAAAGCAGCAGAAATGTACAATTTCACAGGCATCCCGATGACGACACAAGCAAGGGACTGGATCCTCAAGAACACACACGCATCAGAAGCAAACGGAGTCTATTCAACCCAAAAAAACTCTTCAGAACAAGTGGAGAAATGGCGGCTCAGTATACCATTCAAACTTGCACAAGTTGTACAAAAAGTCTGTGGACCGACCATGAAACTTTTTGGGTACAGGTTTATAGACAGTGAACAAACACTTTTAAACAAATCTTTCAGTGTGCTGGAAGAAAAG[C/T]AATTCATTTAGTCCTGAATTGTTTTTGAATTGGTTAAGGAAAACCAAGCATGAATTGCTATATGCATAGCAGACACACACTGGCACAATGTAGCACACTGGGACATTGCTTAAGTCCAAAGTATACTTCATTTTTATATATGCTTGCGGGGCAGGGCTCCAGACTAACTTTTGAGAGCAGTGGCACTGGTGCTGCTAAGCTCTACAGATAATGACACAAACACCAGATTTGTTAGTGCTGCATGTAATTGTAATTACAAGTTTTGTCTCTTAGAAATACACATTTAACAGTAGACTGAGTTAAGAGCTAAAATCCAGATATACACAGTATATATTTTCATAAATGAAGTACATTCTATAAAAATGCAATAGATTCAACTTATTTATTTGTTGATTACAATGACCACAAGTACCATTTAACAACCTCACTTCCTTACCAAGTGGTCTAAATTTTGGATATGTGCATAATAAAAAGGTTGATGAAAACACCAAGATGCGCAT
Associated Phenotype:
Not determined