ZMP
si:dkey-208k4.2
Ensembl ID:
ZFIN ID:
Description:
transcription factor IIIA-like [Source:RefSeq peptide;Acc:NP_001093876]
Human Orthologue:
GTF3A
Human Description:
general transcription factor IIIA [Source:HGNC Symbol;Acc:4662]
Mouse Orthologue:
Gtf3a
Mouse Description:
general transcription factor III A Gene [Source:MGI Symbol;Acc:MGI:1913846]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa23490 | Missense, Nonsense | Available for shipment | Available now |
| sa36811 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa16765 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa23490
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Missense, Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000058548 | Missense | 13 | 379 | 1 | 10 |
| ENSDART00000104457 | Nonsense | 1 | 336 | 1 | 8 |
| ENSDART00000104459 | None | None | 361 | 1 | 9 |
| ENSDART00000138678 | Missense | 6 | 409 | 1 | 9 |
Genomic Location (Zv9):
Chromosome 19 (position 18005211)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 18850446 |
| GRCz11 | 19 | 18313299 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGCAGGTGACTGTAGCTTATAAAGGGAATCCCAATGCGGCCGGAGACTG[G/T]AATTATTGCTTAAAAAGAGAGAGAGAAAGAGAGAGAGAAAAAAAGAATGT
Long Flanking Sequence:
AAAAATGCTTGCTGGGTAGCTAAAAAGAATTCAACTGAATTTTTTATCAGCTCTATTAAAACAGTTAAGACTTGTTTCATTGTGAATTAGGTTAATTAACTTACAGTTAACAAATTTAGCCAAAAAAGATAACTTAGTCATAATGACTTTGTGAAGACCAGAGCTTACCTTAATGTTAACTTTAAAGGTTAATGTTGATTATTATTTTTCATTTTTTTCTCTTACATTTTTTGTTAACTTCTTTTTTTTTCCTAATTCGCTTATAGATTTGTGCCGTGCGCTCATTAATGCTCGGTTAGCTTGAGGAGGTTGATTAAACAAACTTTTGTCAGGTGTTTTTGAACCGAATGGTGTTTTTGGTTAATTTTGGAGGGGAGGGGGCTAGTGCAAGAATAGCACAAAGACGCGCTCATAGTTTACCTAATTATCCAGCATCATTAACACAACCCTTTGCAGGTGACTGTAGCTTATAAAGGGAATCCCAATGCGGCCGGAGACTG[G/T]AATTATTGCTTAAAAAGAGAGAGAGAAAGAGAGAGAGAAAAAAAGAATGTTACAGAAAAAGCTATTGTAAAAGTAATTATAGAAACGAACGTAGACCGTTTTGTTAAAATAATGAACACTGAGGTAATGAAGAGAGAAGACGTTGTACCGCGAGTGCAGCTGTTCAACTGCGTTTATGCTGAATGTGGAGCTACATTTACTCGTCAATGGCGTTTGCAAGAGCACGAGACCGTGCACACTGGTGTGGTAAGTAATACATCGTTGCTTAAATGCTGTCATTTGAAATATTTCTTTAAAGATGTTGTCTTATGTCAGATGTTGTATTTTCTTTTGCTGCATTGAGTACGCGCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGCGTGTGCGTGTGCGTGCGCGCGTTCCCTTCAGCGACCTTACAAGTGTGGTGTTGTGGGATGTGGACGCAGTTTCACTCGTAAATCGCATCTGAATCGCCATACTTCAGCACACAGTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36811
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000058548 | Nonsense | 355 | 379 | 9 | 10 |
| ENSDART00000104457 | Nonsense | 275 | 336 | 8 | 8 |
| ENSDART00000104459 | Nonsense | 300 | 361 | 9 | 9 |
| ENSDART00000138678 | Nonsense | 348 | 409 | 9 | 9 |
Genomic Location (Zv9):
Chromosome 19 (position 18002666)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 18847901 |
| GRCz11 | 19 | 18310754 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCATAAGCGAAGCAGCAAGAGTTGGCAGAAACGTTTGGAAGGACGAAAT[C/T]GACGTCCTCTGGTTGAAGACCTCCATGCTCTTTTTTCTTTGCGCATGAAC
Long Flanking Sequence:
ATCATATTCGCAAGGTTCACCTGCAGCTGCTCTCACACTGCTGCTCCTTCCCTGGCTGCAGTAAGACTTTTGCTATGCGTGTAAGTACATTTTAAGGGACAAAATGTGTCCTAAAATGGTAGGGTTAACATCTTGTGCAAGGTAAAATTATACAGTGTACCTGCAGTTAATTTATGTACTTCTACCTTTTGCTGGTTCCTCAGGAAAGCCTTGTACGCCACATGTTACATCATGAACCTGATGTGGCCAAACTCAAGGTAGTTCAGTCCCTTTTTAAAAGGAGTATTTTGGGTTAAAATCTGAAGCAGTAGTTGTGGTAATTTGTCAGCAGCATCTTCAAAATAATGTAAAACAATGTTCCTATTGTAAAATTTGTGCTGCAATGGTCCTTTTGTTTATGCTTCTAGTTTAATACTTTTTTTTTTTTTTTTTTTCTTCCTCTTAAGCACCCCCATAAGCGAAGCAGCAAGAGTTGGCAGAAACGTTTGGAAGGACGAAAT[C/T]GACGTCCTCTGGTTGAAGACCTCCATGCTCTTTTTTCTTTGCGCATGAACCTCAATCAGAGAGCCAAACTGGAAGCTGATCTGACTGGTTTGTTTAATGAGCGCAAAATCCCCCATCACATTGATCCTGAAGTAAACCTCAGAGATCTATTTGGTAGCCGATTGGCTCAGGCAAATGTGGCTGATTAAAATAAATTTACATAACTAAATTTATATAGTGTGCATGTATGCACTGAGGGGAAAAAGTTATGTTTAATATGTTGGTATTTAAGGTACTGATTTTTTTTTTTTTCTTTTTTTTAAACACATAGTCTGAGATGTTACTTGAGTTATGAAAAAAAACAATAAAGATGGTTCAGTTGTCATTCAGGCTCATATACTTTCCTTTTAGCTAGGGTTGTGTTTTTCCGGGATTTAATAAAAGGGAAGTGGACTTGTTTGGATGAAAGTTTCTATGGCAGAAACAAAGTGCTCGTCTGGTGGTTCCTGATGCACGGATAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16765
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000058548 | None | None | 379 | None | 10 |
| ENSDART00000104457 | Nonsense | 322 | 336 | 8 | 8 |
| ENSDART00000104459 | Nonsense | 347 | 361 | 9 | 9 |
| ENSDART00000138678 | Nonsense | 395 | 409 | 9 | 9 |
Genomic Location (Zv9):
Chromosome 19 (position 18002525)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 18847760 |
| GRCz11 | 19 | 18310613 |
KASP Assay ID:
2261-3141.1 (used for ordering genotyping assays)
KASP Sequence:
TGTTTAATGAGCGCAAAATCCCCCATCACATTGATCCTGAAGTAAACCTC[A/T]GAGATCTATTTGGTAGCCGATTGGCTCAGGCAAATGTGGCTGATTAAAAT
Long Flanking Sequence:
GTAAAATTATACAGTGTACCTGCAGTTAATTTATGTACTTCTACCTTTTGCTGGTTCCTCAGGAAAGCCTTGTACGCCACATGTTACATCATGAACCTGATGTGGCCAAACTCAAGGTAGTTCAGTCCCTTTTTAAAAGGAGTATTTTGGGTTAAAATCTGAAGCAGTAGTTGTGGTAATTTGTCAGCAGCATCTTCAAAATAATGTAAAACAATGTTCCTATTGTAAAATTTGTGCTGCAATGGTCCTTTTGTTTATGCTTCTAGTTTAATACTTTTTTTTTTTTTTTTTTTCTTCCTCTTAAGCACCCCCATAAGCGAAGCAGCAAGAGTTGGCAGAAACGTTTGGAAGGACGAAATCGACGTCCTCTGGTTGAAGACCTCCATGCTCTTTTTTCTTTGCGCATGAACCTCAATCAGAGAGCCAAACTGGAAGCTGATCTGACTGGTTTGTTTAATGAGCGCAAAATCCCCCATCACATTGATCCTGAAGTAAACCTC[A/T]GAGATCTATTTGGTAGCCGATTGGCTCAGGCAAATGTGGCTGATTAAAATAAATTTACATAACTAAATTTATATAGTGTGCATGTATGCACTGAGGGGAAAAAGTTATGTTTAATATGTTGGTATTTAAGGTACTGATTTTTTTTTTTTTCTTTTTTTTAAACACATAGTCTGAGATGTTACTTGAGTTATGAAAAAAAACAATAAAGATGGTTCAGTTGTCATTCAGGCTCATATACTTTCCTTTTAGCTAGGGTTGTGTTTTTCCGGGATTTAATAAAAGGGAAGTGGACTTGTTTGGATGAAAGTTTCTATGGCAGAAACAAAGTGCTCGTCTGGTGGTTCCTGATGCACGGATATAGGGTGATACTCATCTAAGAACTCTTCAAAACTCCAGCATGACTAAGAAAAATGTTTGAAGAAGAGAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATAATTTTTTTTTTTTGTGTGTATGTAT
Associated Phenotype:
Not determined