ZMP
vangl1
Ensembl ID:
ZFIN ID:
Description:
vang-like protein 1 [Source:RefSeq peptide;Acc:NP_991313]
Human Orthologue:
VANGL1
Human Description:
vang-like 1 (van gogh, Drosophila) [Source:HGNC Symbol;Acc:15512]
Mouse Orthologue:
Vangl1
Mouse Description:
vang-like 1 (van gogh, Drosophila) Gene [Source:MGI Symbol;Acc:MGI:2159344]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa15707 | Nonsense | Available for shipment | Available now |
sa13010 | Nonsense | Available for shipment | Available now |
sa16745 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa15707
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000036926 | Nonsense | 73 | 527 | 3 | 8 |
Genomic Location (Zv9):
Chromosome 9 (position 34075491)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 33231437 |
GRCz11 | 9 | 33042183 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTTTTATGCGTGTGATCTWAGCGACTGATCTCTCGACAGGATGAYAACT[G/A]GGGTGAAACCACCACGGCGGTCACTGGAACATCAGACCACAGCTTGTCTC
Long Flanking Sequence:
TCTCAGTTCTGATTAAATTGGCTAAACTACATTACCATACAAAACACAGTCTCTCCCCATAGAAATAAATCCATAAATAACCAGACGAATCCATAAATAAATATAGTTGCAGATGAATTATTGTTCTTACTGCGTATAATATTCCATAATGGAATTCTAATTTGCGCGGCATTTCACATTCCGACGGCGTTCGCTCAGACGTCTTACTGTTAAAACGTTTTCATTTGTTGTCAGTCAGCCTCTCAGTTCTCCGGCTCATTCATATGCAGATGTATGTGAGTTTTGAGTATTTGTCATTAATATATGCTGATGAGGGAGACCTGGGTACTTCCATACTGTCTGTCTGGATTAACAGATTTGTCATTTCATCAGCACCGAGGGAAACGTGGGCTGATCAATAGCTGAGTGCTGCGCTTGGGTTATGAATGGGGCTTTTAGGAGCATGTTGAATTTTTTATGCGTGTGATCTAAGCGACTGATCTCTCGACAGGATGACAACT[G/A]GGGTGAAACCACCACGGCGGTCACTGGAACATCAGACCACAGCTTGTCTCAAGAGGACCTGGCAGGCTTTGGGAAGGACACGGAGGGTCCAGTTGAGAAATTAAACTGTATACGCTTCCTTCCGTTGGCCCTGACCCTCCTCTTGGGTCTGCTGGTCCTGGTCACCCCTCTGTCCTTCCTGATTTTGCCACAGTTAATGTGGCCGGAGCGCCTGCAGACTTGCGGTACTGCATGTGAAGGCCTGTTTCTCTCACTGGCCTTCAAGCTCCTCATCCTGCTGCTGGCCGGCTGGGCTCTGTTTATGCGGCCGACAAGAGCTTCTCTGCCCAGGATAGCAGTGTTTCGTGCCCTGCTGGGTTTACTGACACTCCTCCTGCTGCTGTCCTATTGGCTGTTTTTTGGAGTGCGCATATTGGACTCACAGGTAAGGGCACATGTCTGAAAATAAAAAAAGTGGCAAGAGAAACATGTTCTTGATGAGATCTGCTAAATTGTAGATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13010
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000036926 | Nonsense | 140 | 527 | 3 | 8 |
Genomic Location (Zv9):
Chromosome 9 (position 34075692)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 33231638 |
GRCz11 | 9 | 33042384 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCTGGTCCTGGTCACCCCTYTGTCCTTCCTGRTTTTGCCACAGTTAATGT[G/A]GCCGGAGCGCCTGCAGACTTGCGGTACTGCATGTGAAGGCCTGTTYCTCT
Long Flanking Sequence:
TCTTACTGTTAAAACGTTTTCATTTGTTGTCAGTCAGCCTCTCAGTTCTCCGGCTCATTCATATGCAGATGTATGTGAGTTTTGAGTATTTGTCATTAATATATGCTGATGAGGGAGACCTGGGTACTTCCATACTGTCTGTCTGGATTAACAGATTTGTCATTTCATCAGCACCGAGGGAAACGTGGGCTGATCAATAGCTGAGTGCTGCGCTTGGGTTATGAATGGGGCTTTTAGGAGCATGTTGAATTTTTTATGCGTGTGATCTAAGCGACTGATCTCTCGACAGGATGACAACTGGGGTGAAACCACCACGGCGGTCACTGGAACATCAGACCACAGCTTGTCTCAAGAGGACCTGGCAGGCTTTGGGAAGGACACGGAGGGTCCAGTTGAGAAATTAAACTGTATACGCTTCCTTCCGTTGGCCCTGACCCTCCTCTTGGGTCTGCTGGTCCTGGTCACCCCTCTGTCCTTCCTGATTTTGCCACAGTTAATGT[G/A]GCCGGAGCGCCTGCAGACTTGCGGTACTGCATGTGAAGGCCTGTTTCTCTCACTGGCCTTCAAGCTCCTCATCCTGCTGCTGGCCGGCTGGGCTCTGTTTATGCGGCCGACAAGAGCTTCTCTGCCCAGGATAGCAGTGTTTCGTGCCCTGCTGGGTTTACTGACACTCCTCCTGCTGCTGTCCTATTGGCTGTTTTTTGGAGTGCGCATATTGGACTCACAGGTAAGGGCACATGTCTGAAAATAAAAAAAGTGGCAAGAGAAACATGTTCTTGATGAGATCTGCTAAATTGTAGATGTGCAAATTGTCTTTTATTAGAGTAGATACTCTAACATACACATGTGATTATTATTCTTTGTGATGCTGCACTTAAATTACACATCTAACAGTATAATTTACAAGAAGTTAAGAATATATATGTAATATGATGCTTACATCAGCATTCAAGGTTTAGGAGTTTTTGAAGTTCTTCTTATTAGTAGTAGAAACTTTTTTTATC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16745
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000036926 | Essential Splice Site | 214 | 527 | 3 | 8 |
Genomic Location (Zv9):
Chromosome 9 (position 34075917)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 33231863 |
GRCz11 | 9 | 33042609 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCTGYTGTCCTATTGGCTRTTTTTTGGAGYGCGCATATTGGACTCACAGG[T/C]AAGGGCACATGTCTGAAAATNAAAAAAGTGGCAAGAGAAACATGTTYTTG
Long Flanking Sequence:
TGGGGCTTTTAGGAGCATGTTGAATTTTTTATGCGTGTGATCTAAGCGACTGATCTCTCGACAGGATGACAACTGGGGTGAAACCACCACGGCGGTCACTGGAACATCAGACCACAGCTTGTCTCAAGAGGACCTGGCAGGCTTTGGGAAGGACACGGAGGGTCCAGTTGAGAAATTAAACTGTATACGCTTCCTTCCGTTGGCCCTGACCCTCCTCTTGGGTCTGCTGGTCCTGGTCACCCCTCTGTCCTTCCTGATTTTGCCACAGTTAATGTGGCCGGAGCGCCTGCAGACTTGCGGTACTGCATGTGAAGGCCTGTTTCTCTCACTGGCCTTCAAGCTCCTCATCCTGCTGCTGGCCGGCTGGGCTCTGTTTATGCGGCCGACAAGAGCTTCTCTGCCCAGGATAGCAGTGTTTCGTGCCCTGCTGGGTTTACTGACACTCCTCCTGCTGCTGTCCTATTGGCTGTTTTTTGGAGTGCGCATATTGGACTCACAGG[T/C]AAGGGCACATGTCTGAAAATAAAAAAAGTGGCAAGAGAAACATGTTCTTGATGAGATCTGCTAAATTGTAGATGTGCAAATTGTCTTTTATTAGAGTAGATACTCTAACATACACATGTGATTATTATTCTTTGTGATGCTGCACTTAAATTACACATCTAACAGTATAATTTACAAGAAGTTAAGAATATATATGTAATATGATGCTTACATCAGCATTCAAGGTTTAGGAGTTTTTGAAGTTCTTCTTATTAGTAGTAGAAACTTTTTTTATCTTCCATGAATTTTTCTTAAATTTGACATTTGAACGTGTAGGATTCAGATTTTTGATTATAAAAGTGCATGAGAGTTTAACTGCATTGAAGAATTTGAAATATTTCTGTAGAAACAAATGTAATAATACTATGTCCCGATCAGATTTTTTTGCCCTCAAGTCTGAGTCATTTGATTTTGAGTATCTACTAATACCAAAACCCGATCCGATACTTCTATAATCCATA
Associated Phenotype:
Not determined