ZMP

tfcp2l1

Ensembl ID:

ENSDARG00000029497

ZFIN ID:

ZDB-GENE-040704-58

Description:

transcription factor CP2-like 1 [Source:RefSeq peptide;Acc:NP_001002214]

Human Orthologue:

AC015910.1

Alleles

There are 5 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa18247	Essential Splice Site	Available for shipment	Available now
sa16603	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa18247

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000040480	Essential Splice Site	164	397	5	15
ENSDART00000111960	Essential Splice Site	164	472	5	16
ENSDART00000146663	Essential Splice Site	164	468	5	15

The following transcripts of ENSDARG00000029497 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 9 (position 39351460)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	9	38489356
GRCz11	9	38299151

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CATCGAATTCCTCTGGGATCCTGACAAAAATGCCTCTGTCTTCATKCAGG[T/C]AGAGCTTTTCTTTTATTTCTGAAGTGAGAAACATTAGCGGTAACTTCTCT

Long Flanking Sequence:

TTCCTTTACAGAACAACTCAGAAATCAACCATCAGTCTATTTTAGACATTTATGGGATAAAATACTTTTTTCTTTACTGTATTTATGTTTTTATTTCAGGGACAGATCATGTACGTTTCTTGTAGAATGTCCCATATATATTACTTTTTTTGTTTTGTTAATCAGCGGGACTCTTTTGTGACATGTTGCTGTCTTATCTTGTTTCCAGAGCATTGTGCGTGTTGTTTTTCATGACCGGCGGCTGCAGTACACAGAGCATCAGCAGCTGGAGGGATGGAGGTGGAACCGGCCAGGAGACAGGATTCTGGATATAGGTGGGATCTGACTTCATAATAAAGCAGATTTCTAAAGGGCTGTATCAAACACATTGTCGTATATTTTACAACGTCCAGATATCCCACTGTCAGTGGGCATAATAGAGCCTCACGCTCACCCACTGCAGCTCAACACCATCGAATTCCTCTGGGATCCTGACAAAAATGCCTCTGTCTTCATTCAGG[T/C]AGAGCTTTTCTTTTATTTCTGAAGTGAGAAACATTAGCGGTAACTTCTCTGTTTCTGTAAATACAGGTTAATTGCATTAGCACAGAGTTCACTCCTAGAAAACACGGTGGAGAGAAAGGTGTCCCTTTTCGGATTCAGATTGACACATTCACAGCCAGTGCACATGGAGAATACACTGAACACATGTGCTCCGCCAGCTGCCAGGTCAAAGTCTTTAAGGTAAAGCATCTTAAAGACTCATTCAGTAGATACTTGTGTCCAAAGCGACTTTCTAATGAGGAGGCATTAGGCAATTAAACATAAAGAGGCAATACACACAAGACGTGCAGTTTGTGTGGGATTAGGTAGATCATTCCACCTGCTGGAAACAGTGAATGAAAAGTGATTTACAGCCTCTCTATGATTGCATCACGAGACAGTGCTCACTCCATTGTGTAAACAATCAAAACATTCTATAAAAGAAATCGAATAGAGGTTGTGCGATACCGAAAAACTATTTC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa16603

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

A > G

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000040480	Essential Splice Site	253	397	8	15
ENSDART00000111960	Essential Splice Site	253	472	8	16
ENSDART00000146663	Essential Splice Site	253	468	8	15
ENSDART00000040480	Essential Splice Site	253	397	8	15
ENSDART00000111960	Essential Splice Site	253	472	8	16
ENSDART00000146663	Essential Splice Site	253	468	8	15

The following transcripts of ENSDARG00000029497 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 9 (position 39355231)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	9	38493127
GRCz11	9	38302922

KASP Assay ID:

2260-2195.1 (used for ordering genotyping assays)

KASP Sequence:

TTGAGAATAAGGTCAATATTCTTTGTAATAAGKACATTTCTTTTTCTTTY[A/G]GTGCTCCCCTTGGCCCGAAGCCCCATCCATCAGCAGCACGAGCAACACTC

Long Flanking Sequence:

TTAGAAATTTGCGTTATCGAGCAGTTGGACAGGTATACCTAATAAAGTGGCCGGTGAGTGTATAATTTAAAGACCAGTTTTTTGTTTTCTTCTGTTATGTATGCATCTGTAAATACTGTGATCAAGATATAATCATCATTAATTTAATACTATAAATATAATCATCAGAAGTATTGCTTCTAATGACTTAAATTGTTCTTTTAATAAAATGCTAATGACAGAAAAAGTCACATAACAAATAGCATATGTTTCATCAAATGCTCACTTCTGTACACAAGTTAGTTATTGAGATCTTTCAAGCTGGCATTCCTCTGTTGAATTTTCCATGTCTCCTTACTTTTCGTTTCCTTACTTTGACTGGACATAGTGAAATATTAAACCCTTTTCACACACACAAGCATACAGCAACTGGAAGTCACATGCTTGCTTGTTGGACCCAAGCAATCTATATTGAGAATAAGGTCAATATTCTTTGTAATAAGTACATTTCTTTTTCTTTC[A/G]GTGCTCCCCTTGGCCCGAAGCCCCATCCATCAGCAGCACGAGCAACACTCCATCACCTGCTTATCACAGCGCTCACACTTCCTACAGCTTTCCAGAGGAGTGAGTCCTTATTGAGGTTGAAATCACCTCATGAATACATAAACACAATCCCAATTCTGTTTCGTTGCATTTATAGAAACTGCTCTCCAGACCAGCATGGAGAGCCACTTCTGCCCAGCTGCTCTGATGTAAGTACGGCAGGCTAGTTAAAACATTAATGCCGTGCTCTCTTATCTTTATAGGTGTGTGTTTGAGGACATGGATGATGCTATTCTTCTTCTTTTTGCCATTAGCACCTGTTGCCTTCGTCCTCCACACAGGACACACAGCAGTGGCTCCATCGTAACAGGTTCTCCTCTTTCTGCAGGCTCTTCTCTGGCTTCTCAGGTGGGGTGAAGAATTCTTTCAGAAAAACAAACTTTAGTCGTGTTGTTAGACATCATACAGGTTTAACCATGGAT

Associated Phenotype:

Not determined