ZMP

LOC567602

Ensembl ID:

Human Orthologues:

CDH1, CDH3

Human Descriptions:

cadherin 1, type 1, E-cadherin (epithelial) [Source:HGNC Symbol;Acc:1748]
cadherin 3, type 1, P-cadherin (placental) [Source:HGNC Symbol;Acc:1762]

Mouse Orthologues:

Cdh1, Cdh3

Mouse Descriptions:

cadherin 1 Gene [Source:MGI Symbol;Acc:MGI:88354]
cadherin 3 Gene [Source:MGI Symbol;Acc:MGI:88356]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa16568	Nonsense	Available for shipment	Available now
sa41033	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa16568

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000002834	Nonsense	179	746	4	13

Genomic Location (Zv9):

Chromosome 7 (position 56394303)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	54880386
GRCz11	7	55181797

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

AGATACTTTTWAYGCTGATGTCAGATACAAAATTGTYAGCCAAGAWCCAK[T/A]ATTACCAAATCCAAACATGTTTGAAATYAACTTGGTTACTGGAGGAATTT

Long Flanking Sequence:

AAAATGGCACATTCAGAAAAACCATAATATTAATATTAAATCTTAAACAAGGGGGAAAATAGGGGCCCTTTAAGTTTGTATTTAAATGTTTACACTTAATTGTTTAATAGAGTATTTTACTATATGTTTTACTGGAATTGTGGAATGCTTCACTTTATATCCATGTTGCATCTTGTGTTTTCAGCTCATGGCTCATGCTAATTCAGTTAAAGGAATAAAAGAGAAACCGACCAACCTTACTATCATTGTAGCTGACCAGAACGATAATAGGCCTGTGTTTGTTGAAAATCCTTTTAATGGACACGTTTCTGAATCTGCTACAATAGGTAAGTAAACAGACCAATAGAACAATATTATACATTTCAATGATCCCTCATGATGTTGTTTTTATTCTTCTCTCACTAAAGGTCATGAGTTTATGGCAGTCACAGCCACTGATGCTGATGACCCAGATACTTTTAACGCTGATGTCAGATACAAAATTGTTAGCCAAGATCCAT[T/A]ATTACCAAATCCAAACATGTTTGAAATCAACTTGGTTACTGGAGGAATTTATGTAAAATTCTTAGGTCTAGACAGAGAGGTGAGGACTCGGATTAAATTACTTTACAGTTGTATAGAATGATTTCATGTAATCACTCTCACCTAACAATGCCTTACCTTTCAGCAATTGTCCAGATATACTTTGGTAATTCAAGCTGCAGATCTTCAAGGAGATGGTATGATGACCACTGGCACAGCAGTTATTACTGTTACTGACAGCAATGATAACGCACCTCAGTTTGACGAAACCACGGTATTGCATACATTATAAACGTTTAAAATCTGACTAATTTTATTGAAGATATCATATTTTTATTGAGTAATTTTTTCTGTATAAATACTTAATTTTATGTTTTAGCACATCGTATCTGTCTCAGAGAATCAAGTAGCGGCTATAGTGGCCAAACTTCCAGTTATTGATGCAGATGAACTTGGATCACCAGCCTGGTCCACCAAGTATC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa41033

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000002834	Nonsense	394	746	8	13

Genomic Location (Zv9):

Chromosome 7 (position 56388627)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	54886062
GRCz11	7	55187473

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AAATAATTGCTTCACAAAAATTATATTTTTTACTGTTTGGTTCCAGGTAT[A/T]AAATTAGCAATGATCCTGCTGGCTGGCTAACTGTGAATCGGGAGACTGGA

Long Flanking Sequence:

ATGATGCATCACTCATTTTAATAAAATCATCTGCTAAATGACTAATTGTAAATTTAAATTGCCTATTCTGATGCACGGTTTGAACTTCAGCAGGTTGGCTTAAATATGTCTACATGCCAGAATGCATAGGGTTGGTGCTATGTTATTGCATGATTATATATTTTCATTAAGCTGTTGAACAGTTGTACCTGGTGGGTGTATTTTTATTAGAATTCATTTTTAAGTATTTTAATTGAGTTCTGTGATCGCAAATATCAATTTCCAGTAACAATTTGTTGATAATGGAGCTCTAATTGTAATTAAGATAAATTTAGACAACAAATTAGCATATGAGAATGATCACTTGTGACTCTGAAGACTAGAGTAGTAATTGCTGAAAACAACTGGATTCCCATCACTGAAGTAAATTTCATTTTATAACATGTTCAAATAGAATACAGGTCTATAATTAAATAATTGCTTCACAAAAATTATATTTTTTACTGTTTGGTTCCAGGTAT[A/T]AAATTAGCAATGATCCTGCTGGCTGGCTAACTGTGAATCGGGAGACTGGACTGATTAAAATTAGAAACTCTATGGATAGAGAGTCTTCCTATGTCAGAGATGGCAAATACAGAACTACTATTTTGGCCCTGGATAATGATGGTAATATCTGTTTATTTTAAGAAAAATTATTCTTGTTAGCATAACCCTAAATAATGTTGATTGAAGTTTGTACATTTATGCAGATGACAATCCAGCAACTGGTACAGGAACCCTGGTAATTAAAGTGGAGGATGTAAATGACAATGCTCCTGTTATTAATGAAGAACATATACAAATTTGCAATCGGGAGGCCACAGTCCTTCTCTCTATAACGGACACAGATGGACCTCCTTATGCTGCTCCTTTTAGCATTAGCCTCCTAGGAGACACCAAGAAAAACTGGACTGCGGAAATGAACGAAAACAGTAAGCAGTTATTAACAGGGTTTGAAATAAATACTTATTATATATATATATATA

Associated Phenotype:

Not determined