ZMP
trpa1b
Ensembl ID:
ZFIN ID:
Description:
transient receptor potential cation channel, subfamily A, member 1b [Source:RefSeq peptide;Acc:NP_0
Human Orthologue:
TRPA1
Human Description:
transient receptor potential cation channel, subfamily A, member 1 [Source:HGNC Symbol;Acc:497]
Mouse Orthologue:
Trpa1
Mouse Description:
transient receptor potential cation channel, subfamily A, member 1 Gene [Source:MGI Symbol;Acc:MGI:3
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa16565 | Nonsense | Available for shipment | Available now |
| sa11221 | Essential Splice Site | Available for shipment | Available now |
| sa9365 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa30061 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa37842 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa16565
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000105997 | Nonsense | 278 | 1120 | 8 | 28 |
| ENSDART00000126769 | Nonsense | 278 | 1107 | 7 | 27 |
| ENSDART00000148367 | Nonsense | 306 | 1148 | 8 | 28 |
Genomic Location (Zv9):
Chromosome 24 (position 13579488)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 24 | 13530936 |
| GRCz11 | 24 | 13675355 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTTGTTTTCGCAGAGTGGCAAATGCACRGCCCTCCACTTTGCCWGCAGT[C/T]AGGGTTCTCTGGAGGCTGTCAAAATCATGCTTTCCTCTTACAACAGAACA
Long Flanking Sequence:
ACTGATTTAAGTAAAATCTGTTTAATAGAGTACATAAAATCCCATTGCACCCTGAAAAATGTTTTCGGTACAAAATGTATACATATACCCATTCCTAAAAAAAAAAGGTTTAAATGCAGCCTGAATACCTGACCCCCAATCTGGACCACACAAATACACTAGCGACTCCTCCATTTGTCGTCTTCAGTCCATAGCAGTGAGGTTGATGCATTCAGTAATAGCTTCAGATAGTTAAATTGATACAAATTGCTGCCACTTACGTTTATAACTGAGCTTGGTCGTTCTGTCCATTGCCACGGCAATTCAGGGCACTCTTTCTCATTAATGGTTCGTGTTACTGGTGCAGCAACTGAGAGATTGTCCCCCTTTTGCACTACCTGACCCTGCCTCTTCTACTTCTGTCAGGCTAATAGCCGCCTTCCATCTCTGTGCCTGTATGTGTGTGGCCTGATTTGTTTTCGCAGAGTGGCAAATGCACGGCCCTCCACTTTGCCTGCAGT[C/T]AGGGTTCTCTGGAGGCTGTCAAAATCATGCTTTCCTCTTACAACAGAACAGAAGATATCGTCAACATTCGGGATGGAGCCAATCGGACACCTTTGCATAGGTCAGTTGGATGTCGTACTGTGATAAAGTAGACATTATGGGATGAGATTTTTGCTACTGGTAATCCAGGTGCTGATTTATTTCATGTCAGTTCACATGTCAGAACCCAGTCTCATTAAAGATACCAACATAGGATATTTGTGGAGTATGTATGGCCGAATTTTAAAACGAACGCTATGGGGCCATGTGATGCCGTTCCTTCTTAGCACTTACCAGCTGACCGCTTACTTCCATACGGACGGCTTTCCCGCTGTTACCAGTTTGTCCAGTGAGCTCGCCATGTAGGTAGGCGGACTTGAGATGCAGAGAGGAGATGACTACGACGATGGGGTTCAAGTCTGGTAAAGAACGGTTTCAACAAGTGGGAAAGACAAAAACAGAATTAAAAAAATAAAATAAAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11221
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000105997 | Essential Splice Site | 327 | 1120 | 9 | 28 |
| ENSDART00000126769 | Essential Splice Site | 327 | 1107 | 8 | 27 |
| ENSDART00000148367 | Essential Splice Site | 355 | 1148 | 9 | 28 |
Genomic Location (Zv9):
Chromosome 24 (position 13588481)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 24 | 13539929 |
| GRCz11 | 24 | 13684348 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGCHACGCTRTTTGATCACGTTGAGTTGGCTGAATATCTTATTTCAAAG[G/A]KAAATGTCTGAATGACTTGCTTTGTGAATAATCCAAACCCCAACCTTTAT
Long Flanking Sequence:
CTTATAAGTTGTTTACTATTTAAGACTTTTTATTAAAAAAAAAAATGTTACACACACTGTTTGCTAAGGAATGCAAAAACTTAGAAGCTCAATATCTCAAAATCATTCAGAATGCAGACAGAACCTTATAATTCCAAGGTGACGAAATGCAGATACGTTTTTTATCTTTTTACCGTTTGTACCTTTTTCACTCATCATTTCCAGTAGGTTAGAGACTAGTGGGGTGGAGCACTTTAAATTTTGAGCAGGGCAATTTAGACACCTTCTCCCCCCATGACCATGCCTCAGTAAACAATTAAGGACAGAACCCATTATTTTCCTCTTTGTGCTGAATATAGACCTCTGACATGTTCATTTTTCTTTTGTTTATATTATTAATATATATGCCGTAGTAAATATTTGATAAATTGTCATGCTTCAAAGATTAACAATGACTTTCTTCTCCTAATAGAGCCACGCTGTTTGATCACGTTGAGTTGGCTGAATATCTTATTTCAAAG[G/A]TAAATGTCTGAATGACTTGCTTTGTGAATAATCCAAACCCCAACCTTTATTCTGCTGTGCGTGCACTCTTTGAACCAACAAGCTGCATCGCTCAAATTGATCTCGTGATAAAACAAGTATTAAGAATCCAATATCTCATCATCTTATCACATGTCTTTTGATAAAGCCTAATACACTGTCATTGGATCTCATTTGTCTTGGAAAGGGAGCAGAAATTGACTCTATTGACTGTAAGGGACTGTCTCCGCTTCTGCTCGCCTCCAGCTGCAGCGCTTGGAAAACAGTTGCATATCTGTTGTCCATTGGTAAGACATTTCTATTGATTTTCAACACATTTTCACTAATATCATTTGCATGCACATTATGATGCATTTAATATTTTGTTGTGTTATAAAATAGGTGCAGATTTTAAAATCAAAGAAAAAACAGGTCGCAACTTCCTCCACTTTGTTATTCTTCAACCTAAAGGCCTAAAAAATCTTCCTGAGACGGTTTTGCAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9365
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000105997 | Essential Splice Site | 327 | 1120 | 9 | 28 |
| ENSDART00000126769 | Essential Splice Site | 327 | 1107 | 8 | 27 |
| ENSDART00000148367 | Essential Splice Site | 355 | 1148 | 9 | 28 |
Genomic Location (Zv9):
Chromosome 24 (position 13588482)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 24 | 13539930 |
| GRCz11 | 24 | 13684349 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGCYACGCTRTTTGATCACGTTGAGTTGGCTGAATATCTTATTTCAAAGR[T/G]AAATGTCTGAATGACTTGCTTTGTGAATAATCCAAACCCCAACCTTTATT
Long Flanking Sequence:
TTATAAGTTGTTTACTATTTAAGACTTTTTATTAAAAAAAAAAATGTTACACACACTGTTTGCTAAGGAATGCAAAAACTTAGAAGCTCAATATCTCAAAATCATTCAGAATGCAGACAGAACCTTATAATTCCAAGGTGACGAAATGCAGATACGTTTTTTATCTTTTTACCGTTTGTACCTTTTTCACTCATCATTTCCAGTAGGTTAGAGACTAGTGGGGTGGAGCACTTTAAATTTTGAGCAGGGCAATTTAGACACCTTCTCCCCCCATGACCATGCCTCAGTAAACAATTAAGGACAGAACCCATTATTTTCCTCTTTGTGCTGAATATAGACCTCTGACATGTTCATTTTTCTTTTGTTTATATTATTAATATATATGCCGTAGTAAATATTTGATAAATTGTCATGCTTCAAAGATTAACAATGACTTTCTTCTCCTAATAGAGCCACGCTGTTTGATCACGTTGAGTTGGCTGAATATCTTATTTCAAAGG[T/G]AAATGTCTGAATGACTTGCTTTGTGAATAATCCAAACCCCAACCTTTATTCTGCTGTGCGTGCACTCTTTGAACCAACAAGCTGCATCGCTCAAATTGATCTCGTGATAAAACAAGTATTAAGAATCCAATATCTCATCATCTTATCACATGTCTTTTGATAAAGCCTAATACACTGTCATTGGATCTCATTTGTCTTGGAAAGGGAGCAGAAATTGACTCTATTGACTGTAAGGGACTGTCTCCGCTTCTGCTCGCCTCCAGCTGCAGCGCTTGGAAAACAGTTGCATATCTGTTGTCCATTGGTAAGACATTTCTATTGATTTTCAACACATTTTCACTAATATCATTTGCATGCACATTATGATGCATTTAATATTTTGTTGTGTTATAAAATAGGTGCAGATTTTAAAATCAAAGAAAAAACAGGTCGCAACTTCCTCCACTTTGTTATTCTTCAACCTAAAGGCCTAAAAAATCTTCCTGAGACGGTTTTGCAGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30061
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000105997 | Nonsense | 610 | 1120 | 15 | 28 |
| ENSDART00000126769 | Nonsense | 597 | 1107 | 14 | 27 |
| ENSDART00000148367 | Nonsense | 638 | 1148 | 15 | 28 |
Genomic Location (Zv9):
Chromosome 24 (position 13595299)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 24 | 13546747 |
| GRCz11 | 24 | 13691166 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCATGAAGCTGTGCGGAATGAGAGAAGAGAAGTAGTGAACGCCACCATT[G/T]AACATGAGCGGTAAGGAAATTCAAGGTCCATGAGGGTAGCCTTTCTTCAA
Long Flanking Sequence:
CTACTAGATGAAAAAAATGAAGATGGGGTAAGCAGAATAACAATCCCTAAGAACCCTGAATACAATCAGTTTGAGGAATACAATACTGCAAGCCATTGGAAAACAGCTGAAAGAGAGAGAGAGAAAAAAAAACAATATCTTTCCTAATGTATTATGCCAAAGAAACAAGTTAAAAATATTAATACTTTCACTTAAAGTTCTCTGTATTATAGCTTTACAGCATTTCTGATTAGGAAAATGCAGCCACACTAAGCCTTTTTCCCTCAAAATGTACTTTATATATTTTATTTGAAGTATTTGTAATTGATTTGTGATTATTCTATAAATCTTGTATACTTTAACAGAACACAGCCCTTCATATAGCAGCACAAGCTGGACATGTAAGTGCTGTTTTGCTGTTATTGGACAGAGGAGCTGAAATCGCTCTCAACGATGCTGACAACTCTTTTTTGCATGAAGCTGTGCGGAATGAGAGAAGAGAAGTAGTGAACGCCACCATT[G/T]AACATGAGCGGTAAGGAAATTCAAGGTCCATGAGGGTAGCCTTTCTTCAACACACCTCACTCTTAAAAGAAAAGAAAGCCAAGGAGAAAAGAATTTATAATCAGAACATATATCCAGACATACAATTTTTTTTTTTTTCCGTGAGCTTCTACAGTGCAACAGAATTACAGAGACAGACAGAAATCAGATAAAAAATATATTTGAAAAAAAGAAATAAGTAGTGAATGCAAATGTACTAGTGTGTGTACATGTATATTACTATATACAGCATTATGTGCAGCTGTTATGTACAAATTGGCATGTAAAGTGTGCTGTAATATAAGTGTATATGTGTATAAAAAGTGTATAGCAAGTAGATGAGATGGATTGCCTGAGGGAAGAAACTCTTTCTGTGTCGGGCTGTTCTGGTGCGCACTGCTCTGTAGCGTTGACCATAGGGTAACAGTTCAAAGAGGCAGTGTGCTGGGTGTGAGAGGTCCAGAGTGATTTTACCAGCCCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37842
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000105997 | Essential Splice Site | 900 | 1120 | 23 | 28 |
| ENSDART00000126769 | Essential Splice Site | 887 | 1107 | 22 | 27 |
| ENSDART00000148367 | Essential Splice Site | 928 | 1148 | 23 | 28 |
Genomic Location (Zv9):
Chromosome 24 (position 13609935)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 24 | 13561383 |
| GRCz11 | 24 | 13705802 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTTTTGCTGGCTTTCGGCTTGGCTTTCTACGCTCTGATGCTCCACAGGG[T/A]AAGTCCAAAAAGAGAGATCATATCATCCCAGCATGACAGACACGTCTTGG
Long Flanking Sequence:
GGCCTGTTCAATTACTCTTTCAGATGATTGGTTTCTGACGAAAACCCCATAGTGGAGGTTTCCACATGGCATTGAAGCTCCCCTCCCGCTGGGGAACTTTTGATTTTCCAATAGACTGTGACAGTTTGTAAAATGTACATGTAATTTTGGACAAGCCATTTATTTATTTTTTTTTCAAATGTAAATAAAAACTGAGAACTTTTTTTCCACAATGGTGCCTCTTGTACATTGTCTCATTATGTTTTGGGAGAAGCCTGTGTCATTTATGCTCTAAAACAAACTTGCTGGTGGAATAAATGTAACTAAGTCAGATTTTTTTTTTCAAAACACTTAAGAAATGAACTCACAAATGCTATTTCCACATGACAGATTTGAGCGGATTGGGATTTACGTGGTGATGTTTAATGGAATCGTACGGACCCTGGTGTGCATCATGGTTCTTTTTGTCTTCCTTTTGCTGGCTTTCGGCTTGGCTTTCTACGCTCTGATGCTCCACAGGG[T/A]AAGTCCAAAAAGAGAGATCATATCATCCCAGCATGACAGACACGTCTTGGTAAGTCATTGTGGTTTGATAATAATGTTTGCTGTTTGCTTCTTTTTAACAGCCGGAGTTCAGTTCCATCAGCCTAGCGTTAGCGCAAACGTTTGTGATGACAGTAGGAGAGCTAAACTACCAAAGCACATTTCTTAACTCCTATGAAGAAGGCCACATGGCTTTCCCAGCCATCACTTATTTAGTTTTTGTGTTTTTTGTTCTTCTCATGCCCATTCTTCTCATGAACCTAATGGTACAGCAATTAACACTTATTGTTATTAATAGCTGCAGATTGTTAGGACAAATTAGCTTATTTGTCTAAATAATGTTGCAGATTGGTTTGGCTGTAGGAGACATTGCAGAGGTACAGAGAAACGCAGAGCTGAAAAGGATTGCTATGCAGGTGAGCAGACTGGATTGTGAATTTTTTTTTTGCTTGTTTTTTTAGAATGATTTAAATACTTAACAT
Associated Phenotype:
Not determined