Busch Lab

ZMP

gltscr1

Ensembl ID:
ENSDARG00000061159
ZFIN ID:
ZDB-GENE-031116-2
Description:
Novel protein similar to human glioma tumor suppressor candidate region gene 1 (GLTSCR1) [Source:Uni
Human Orthologue:
KIAA0240
Human Description:
KIAA0240 [Source:HGNC Symbol;Acc:21111]
Mouse Orthologue:
BC032203
Mouse Description:
cDNA sequence BC032203 Gene [Source:MGI Symbol;Acc:MGI:2673855]

Alleles

There are 8 alleles of this gene:

Allele Name Consequence Status Availability
sa43165 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa36722 Nonsense Available for shipment Available now
sa29089 Nonsense Mutation detected in F1 DNA Not yet available
sa16525 Nonsense Available for shipment Available now
sa23374 Nonsense Available for shipment Available now
sa13301 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa43165
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000098540 Essential Splice Site 30 1800 3 13
ENSDART00000144271 None 1 1771 1 11
Genomic Location (Zv9):
Chromosome 18 (position 43048443)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 44638334
GRCz11 18 44631788
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGAAAATGTGACTGGGTCTAGTTTTTAAAAAGTCTGTCTGTGTTTTCCA[G/T]GGCCATGTTCCTGAGGTTCCGGCACAGGTTCAGCTGTCGACAAGTGAGCC
Long Flanking Sequence:
CCTGTTTGCTTGGCTTTTTAACTTGGTTGTGCCTGCATTTTGTTCTGGTTGATTGGTGCACTGTCCTCACTTTTCTCTTCCCTTGCCTTTTCCTCTTTGTCTGCCTATTTGCCCCTTGTGCGTCTTCTCCCTGTCGCTTTCACACGCCTGTCTGTGTGCTGTGGTGATTTCTGCCTGTCCTATCCTGGGTATATCTGTCTGTAGCTGGACACTGATGACCTATTGGATGGCTCAGGTGACCCGTCCAGCTCGTTCTTCTCCAGCACTGGGGTGAGTAAAATCCCCCATTTGCGCCAACCTCCTGGCTCCATCCTTTTTTTCGTAGCATGTGCTCCTCAACCCCACCATCCAAATCAGATGCATTGTGCACCAGATCTGCAACTACAGCAGTCAGTCCCAAAGGAGTGCCACCATCCCAAATCCATCCTTAGCATGTTATTTCATATGATTCTGAAAATGTGACTGGGTCTAGTTTTTAAAAAGTCTGTCTGTGTTTTCCA[G/T]GGCCATGTTCCTGAGGTTCCGGCACAGGTTCAGCTGTCGACAAGTGAGCCGGGCCTTCCAAGAGTCAGCGTTGATTTGGACTTCTTGGAGGACGATGACATATTGGGGGGATCGCCAGGAGGAGACAATGGAAGTAATGGTGTTGGGACAAATCATGAGCCCTGTGACATTTTGCAGCAGAGCTTGGCGGAGGCTAACATCACAGAGCAGAGCCTTCAAGAGGCAGATGCTGAGCTTGACCTCAGTTCCTTTGGGCTAACTGGCCTTACGCAGGTGGTTCAACCCCTGCCTGATGCCGGCCTGTCTGGGGTGGGCATTGGAGGTGCAACTCAGATTTTTCCAAACCAAGGCACCCCTACCGCACCCTCAAATCCCACTCCAGACATGCTTGGTTCTGTCCTGGCACATCCAGGTCTGCAGCTTCAACAACAGGTCATGAACAAGGCTATCAGCGTCCAGCCTTTTGTACAACAAGTCGGACTTGGAAATGTAACACTTCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36722
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000098540 Nonsense 217 1800 3 13
ENSDART00000144271 Nonsense 188 1771 1 11
Genomic Location (Zv9):
Chromosome 18 (position 43049005)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 44638896
GRCz11 18 44632350
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCTTCAGGCCCTACCGAACGGCAGCCAGTCTGGACCGTTGGGCATTGGA[C/T]AAATTCAAGTGGTGGGTCAGCCCACTGTAATGACTATAAATCCATCTGGG
Long Flanking Sequence:
GAGTCAGCGTTGATTTGGACTTCTTGGAGGACGATGACATATTGGGGGGATCGCCAGGAGGAGACAATGGAAGTAATGGTGTTGGGACAAATCATGAGCCCTGTGACATTTTGCAGCAGAGCTTGGCGGAGGCTAACATCACAGAGCAGAGCCTTCAAGAGGCAGATGCTGAGCTTGACCTCAGTTCCTTTGGGCTAACTGGCCTTACGCAGGTGGTTCAACCCCTGCCTGATGCCGGCCTGTCTGGGGTGGGCATTGGAGGTGCAACTCAGATTTTTCCAAACCAAGGCACCCCTACCGCACCCTCAAATCCCACTCCAGACATGCTTGGTTCTGTCCTGGCACATCCAGGTCTGCAGCTTCAACAACAGGTCATGAACAAGGCTATCAGCGTCCAGCCTTTTGTACAACAAGTCGGACTTGGAAATGTAACACTTCAGCCAATTTCGAGCCTTCAGGCCCTACCGAACGGCAGCCAGTCTGGACCGTTGGGCATTGGA[C/T]AAATTCAAGTGGTGGGTCAGCCCACTGTAATGACTATAAATCCATCTGGGCAGCAAATCTTGACGAAAACCATGGGTGGCTACCAACTGCATCAACCTGGGCCGGAGGCAGCAAGCGCTGGAACGCAGGCTGGGCTTGGAAGCTCTGTTTTGAGTTCAGGAGGTGGACTTGTAATTCAAGGGGGCAAGGCCACTCTCGGGTCCCCTGCCTTAAATGGGCCAGCTGTCTGCTTAGGCAGCACAAATACCAACAACAGTGCAACTACAATGGCCACTGCTGGTGGTATAGTGGGTTTTAGTAATGCCTCTTTGGGTGCAGGAATTGGATCTCAGACCCAGCCTCAAGGCCAAATCATGCAGAATGTCATCATCCAGCGAACGCCAACGCCAATACAGCCCAAACCTCCTCAAGGGGGTACAATCCAACCCAAAATCTTCAAGCAACAACAACAACAGCTTCCTGCCCCACATGCCTTGCCAAATGATGCTAATAAAGCTCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa29089
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000098540 Nonsense 427 1800 3 13
ENSDART00000144271 Nonsense 398 1771 1 11
Genomic Location (Zv9):
Chromosome 18 (position 43049635)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 44639526
GRCz11 18 44632980
KASP Assay ID:
2261-2568.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCACACAGGCAGCGTCGCAGGGAACACAGTTTTCTCAAGCGCTCTTTAAA[C/T]AGCAGGGCCCTCAAACTTCAGGCAAACCCCTCAGTGTTCACTTGTTAAAC
Long Flanking Sequence:
CTGGGCTTGGAAGCTCTGTTTTGAGTTCAGGAGGTGGACTTGTAATTCAAGGGGGCAAGGCCACTCTCGGGTCCCCTGCCTTAAATGGGCCAGCTGTCTGCTTAGGCAGCACAAATACCAACAACAGTGCAACTACAATGGCCACTGCTGGTGGTATAGTGGGTTTTAGTAATGCCTCTTTGGGTGCAGGAATTGGATCTCAGACCCAGCCTCAAGGCCAAATCATGCAGAATGTCATCATCCAGCGAACGCCAACGCCAATACAGCCCAAACCTCCTCAAGGGGGTACAATCCAACCCAAAATCTTCAAGCAACAACAACAACAGCTTCCTGCCCCACATGCCTTGCCAAATGATGCTAATAAAGCTCTGGGGGTACAGCAAATCCCAGTGTCAGCTGGTCAGAATGTAACGTTCCTCACCGGGAAGCCTGGCTCTAACGTAGTTTTGAGCACACAGGCAGCGTCGCAGGGAACACAGTTTTCTCAAGCGCTCTTTAAA[C/T]AGCAGGGCCCTCAAACTTCAGGCAAACCCCTCAGTGTTCACTTGTTAAACCAACAGGGCAGCATTGTCATTCCCTCGCAAACTGTCCTGCAGGGCCAAAACCACCAGTTCCTCTTACCAGGGCTTCAAGCAGGAGGCCAGATCCTGGCTCAGCATCCTGGTGGACACATCATAACCAGTCAGGGGCCTGGAGGGCAGATAATCGCTAATCAGATCTTGACAGCCAATCAGAACATCAACTTGGGACAGGTGTTGGCTTCACAGGGCCACCCTGGTGCAGCCCACATTCTCTCTGGACACATCCAGCTCCAGCCTGGTCAGATGGGTCAGCCTGCACTGTTCCAAATGCCGGTGTCTTTGGCGCATACTCAGACACAATCTCATCCGGTAACCGGGCATGTACAAACGGTCATTCAGGGCATGCCTATACAGAATTCCCTGTCTGTGGAGAGCCTTAGCCCAGCAGTCAGTTTACAGACGTTGCAGCAGTCTGGCGGCGTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16525
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000098540 Nonsense 698 1800 3 13
ENSDART00000144271 Nonsense 669 1771 1 11
Genomic Location (Zv9):
Chromosome 18 (position 43050448)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 44640339
GRCz11 18 44633793
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTTGTTCACGTCACCTGGTTCCGGCATGATCCTGAGCCAGGAGCCTCTT[C/T]AAATGTTCCTGCACCAGGTCAGTGTGCTCTCTTTAAACTTTATCTGCTGT
Long Flanking Sequence:
CTGGTCAGATGGGTCAGCCTGCACTGTTCCAAATGCCGGTGTCTTTGGCGCATACTCAGACACAATCTCATCCGGTAACCGGGCATGTACAAACGGTCATTCAGGGCATGCCTATACAGAATTCCCTGTCTGTGGAGAGCCTTAGCCCAGCAGTCAGTTTACAGACGTTGCAGCAGTCTGGCGGCGTCCCTAATAATGGTAGCAGTGGATCGACGGCAATGGCGCCATGCCAGCCAGGAGAGGGTATCACTGTATTGGGCGGCTCTTCTGACTCTGCTGCTCAACCAGCACAGACGCAACCTCAGCCCTCAATTCTCACGGTTCAGACGACGCCTCCAGTTTCAGTAGCAGCTTCGGTTCCTTCCTCTTCATCTCCATCCCCAACGATGGCCACGTCTGCATCCACAATGGTGGGTCTGTGTTCACAGGCCCAGCACAGCCCTGGAAAAGTGTTGTTCACGTCACCTGGTTCCGGCATGATCCTGAGCCAGGAGCCTCTT[C/T]AAATGTTCCTGCACCAGGTCAGTGTGCTCTCTTTAAACTTTATCTGCTGTTTGCAAACTGTGTGCTAACATAACAACATTTAGAGCCCCAAGCTGACCTCTGGACCAGTTTGAATGATTGTTTTACCTCTCCCATTCCTGAACTGATAAATGTACCTATGTTAGGAGCAACAGCATCACGCAGGAAAAGACCCACCTGCCGCTGTGGGTGTACCTGCATCTGTTATCGTCAGCGGCAGCAGTTCTGGTCCCGTCCCTTCAGGCCATGACAACTTGTTAGCTGAGACTCGGCAGAGGCAGAGTCCCAGTCCCTCCCTTGGTCCTGCCCACATGGCAACAGTGGTTAACAAGGTAGATGAGCTCATGCTCTGTGCTAAGCCCCACCCACTTGTTGCTGCCACTGCTGCGTATTGGACCACTGTCTCCCAGCAGAATTCCCTCTTTTTCTGTCCTCTTGTCCTTCTACTGTCATTGCTCAGGCTACTGCTCTTTCACTTGTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23374
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000098540 Nonsense 917 1800 5 13
ENSDART00000144271 Nonsense 888 1771 3 11
Genomic Location (Zv9):
Chromosome 18 (position 43054654)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 44644545
GRCz11 18 44637999
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCGCAGCCACTTCCCACACAGTTCCAGTTCCAGCCCCCAGTCTCCAGCT[C/A]GTCTCCAGCTGCAGCAGTGAAACAGCAGGTGACGGTGGTGCCTGGGCTGA
Long Flanking Sequence:
ACTGACAATTTCTCTCATCCCCCACCTCCTCTTTTTTACCATATAGGTTCCATCGTCAGCACATTCACAGTCTATAAAGATCCAAAACGCCTCCCAATCTCAGCCTGTGGTCACCCCTTCGCCAGCACCCACACTGTCCGACAGCCCTCAACCTGCTCAAGTTTCCCCTCTCACTCTCGGGCAGCAGATCCAGTCTCCCCATCAACAGTCTCGGCCTCCCTCGCAGCCCCAGCCTCCTTCACAGGCACAGACTCCTTCACGCTCATGCACCCCTTCCTCTCTACCGCCTCTCTTCATCATTCACAATCAGATGGGAGGTTCTCCACAGCCGGCTCCACCACCTCAGCAACAGCAGCCTCAGCAGTTACAAGTGCAGCTCCAGCCTCAAGTTCTTCCTCAGCCTGCTGCTCTGCAGCCAGACGTACCTCCTTCCTCGTGCTCCCCAAAGCCTCCGCAGCCACTTCCCACACAGTTCCAGTTCCAGCCCCCAGTCTCCAGCT[C/A]GTCTCCAGCTGCAGCAGTGAAACAGCAGGTGACGGTGGTGCCTGGGCTGACCGCAGAACAGCAGCATCACCTACAGCTGGTCAGTGCGCAGCTGCAGACCATGTCATCAATCACACAGCCCTCCCCTCAACAAAAGCAGCTCTTGGAAAAACTTCACCAGGTATTGTATCATCAGTTTATCCCAAATACCTCGCTCTAAGTGCTTGTGAAGTGTATAGACATGAGTGGATGAAAATTCTGGAGAGAAACAGAAGATTCTGACTGGATCTTTTAACAGATGTTCCCTCCATGAACATTTTTGTTTGGTCTTTATTCATGGACACAAATGTACTGGATTGATCAACTCATTCTAAATACCCTGCTCTAAGTGTTTGTGATGCGGGTTTGCGTGGAAACAATGTTAGTTTTCGCCAACTATATTTATTTTACTGACGAAAAGGAAATAAAAATAAGTTTTAATGACAAAATCTATGACAAAATGTACTGATGTTTTTGTCCAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13301
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000098540 Nonsense 1694 1800 13 13
ENSDART00000144271 Nonsense 1665 1771 11 11
Genomic Location (Zv9):
Chromosome 18 (position 43062262)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 44652153
GRCz11 18 44645607
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGAGTCTTCCTGCACAAGAGACTCGTCACTTCCTGCCAAACGCTGCAAGT[C/A]GGACTCTCCRGACATGGACAATGCAAGCTTCTCCAGCGGCAGCCCGCYGC
Long Flanking Sequence:
AACGTGCAGGCTCCCGCTCCGAAAGACATACCGTGAGAACATCAGTCCCCGTCACAGGCCTGGAGTACCAGGAGGTGGTGGAGATACACTACCCATTCTGCCTGCAGGACCTCCTGTTACCTCTTCGCCCCAACCGCAAAGCTCGTCCCCTCAACCCGAACGAACTGTGATAGCCAGTGTGAAACTGGAGCGGCAAGGTGGACACGGGCGATCTCACCCCCATGCGGAGTCACAAAGCCTGGCAGCCGTTGAAGACGTCCTTTATCGGGGAATAAAAAACGCGTACCAACATCATCGGGAGTTTGATAAAGACGATGAGGATGATATGGAGGAAGGTGGTGGTGGTGGTGGTGCTTTGGGGCGGTTAAAGGGCATAGGAAGCAAACACCGGGAAGGGGGACGGGGCGCCTTCAGGATGGATCAGCATGCCCCAGGGCCGCCCTCTCCCGGAGAGTCTTCCTGCACAAGAGACTCGTCACTTCCTGCCAAACGCTGCAAGT[C/A]GGACTCTCCGGACATGGACAATGCAAGCTTCTCCAGCGGCAGCCCGCCGCCTGACGACTCGCTAAATGAGCACCTGCAGTGTGCCATAGACAGTATACTAAACCTCCAACAGGGCCCTCCTGGACACGGAGGCTCAGGGAGAGGGGATTTAGGGAGGGTTCATGGGGCAAACCTGCCTAACCAGCACCAAACCCATCCCTCCTACAGACAGTCCATGCCTCCCCTCTCAACACAGCCCTCGTCCGCCCCCATGTCCCAGCATTCACAGGTAGGAGGGCGAGGGCAGAATGGAAATCTGGTTTCACAGACGCACAGTAGATAACAGCCCCTTCAGCCCACGTCGACTGAAAGACTGAAAAAGCAGGATGTCAGTGCATAGGGGGAAGAAAATGGAGACATTTTCCCATGTTCAGCTGTGTTTGCTTTGTTTGTCTGTGGTTCGTGCTGATCAAACGTGTTCTTTTGGTTTACATATGGCCCTTTAAGTGTACTTTCTAAGT
Associated Phenotype:
Not determined