ZMP
lrrtm1
Ensembl ID:
ZFIN ID:
Description:
Leucine rich repeat transmembrane neuronal 1 [Source:UniProtKB/TrEMBL;Acc:B8JKM0]
Human Orthologue:
LRRTM1
Human Description:
leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:19408]
Mouse Orthologue:
Lrrtm1
Mouse Description:
leucine rich repeat transmembrane neuronal 1 Gene [Source:MGI Symbol;Acc:MGI:2389173]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa16451 | Nonsense | Available for shipment | Available now |
| sa15349 | Nonsense | Available for shipment | Available now |
| sa12867 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa16451
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000074618 | Nonsense | 146 | 522 | 1 | 1 |
| ENSDART00000133917 | Nonsense | 148 | 524 | 1 | 1 |
| ENSDART00000074618 | Nonsense | 146 | 522 | 1 | 1 |
| ENSDART00000133917 | Nonsense | 148 | 524 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 1 (position 43160593)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 42076909 |
| GRCz11 | 1 | 42778073 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AACGGGACCTTYAGRCCTCTGCCCAATCTGCGAATAYTGGATTTATCCTA[T/A]AACAGACTTCAGTCCTTGGAGCCAGACCTTTTCCATGGCCTTAGGAAGCT
Long Flanking Sequence:
ATGACCAAGGTTTGAAAGATTCAATGGACTTTTTCTCTTTAACACTGCAGGATATTCATGCTAATGGATTTCCTTCTAATTGGTCTGTACCTAAAGTGGCCGCTAAGGAAGCCCCCTGGGCTGATACTGTGCTCCCTGGGCATTGTTCTGAAAATAGTTCCTTTGGTGGGGGGGAGCTGTCCGAGGCTGTGCCGATGCGACAACAAGCAGTTGTATTGTGAGGGACTCAACCTGACAGATATCCCCCAAAACCTGAGCAGCGCCATTGGTTTGTCCCTACGTGAGAATAACATCTCTGAGCTGCGGGAAGGGAACTTTGTGGGCCTGTCACAGCTTACCTGGCTCTACTTGGATCATAACAATATTGAGATTGTCGAGGAGAGTGCTTTTGAGAGGCTGCGAAGGATTAAAGAGCTGGATCTGAGCACCAACCGTATAGAAAGTCTGCCCAACGGGACCTTTAGACCTCTGCCCAATCTGCGAATACTGGATTTATCCTA[T/A]AACAGACTTCAGTCCTTGGAGCCAGACCTTTTCCATGGCCTTAGGAAGCTTACCAATTTACATTTGCGCTACAATGCCCTTAAATTCATCCCTGTGCGGATTTTCCAGGATTGCAGGAGCATGCAATTCCTGGATCTGGGTTACAACCAGCTGCAGAGCCTGGCACGTAATTCATTTGCCGGACTCTTTAAGCTTACTGAGCTGCATCTGGAGCACAATGAGTTGGTGAAAGTCAACCTAGCCCATTTCCCCCGCCTCATATCCCTGCGGACTCTCTACATGAGAAACAATAAGGCCACCATAGTGGTCAACACCCTTGAGTGGACCTGGGACTACTTGGAGAAGATTGACTTCTCCAACAATGAGATCGAGTACATCGAGCCACATGTGTTTGAGAGCGTGCCCAAACTGAACACTCTCATGCTGGACTCTAATAAACTGACTTACATAGATCAACGGATTTTGGACTCATGGACATCACTGAGCAGCATCACACTGTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15349
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000074618 | Nonsense | 146 | 522 | 1 | 1 |
| ENSDART00000133917 | Nonsense | 148 | 524 | 1 | 1 |
| ENSDART00000074618 | Nonsense | 146 | 522 | 1 | 1 |
| ENSDART00000133917 | Nonsense | 148 | 524 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 1 (position 43160593)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 42076909 |
| GRCz11 | 1 | 42778073 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AACGGGACCTTYAGRCCTCTGCCCAATCTGCGAATAYTGGATTTATCCTA[T/G]AACAGACTTCAGTCCTTGGAGCCAGACCTTTTCCATGGCCTTAGGAAGCT
Long Flanking Sequence:
ATGACCAAGGTTTGAAAGATTCAATGGACTTTTTCTCTTTAACACTGCAGGATATTCATGCTAATGGATTTCCTTCTAATTGGTCTGTACCTAAAGTGGCCGCTAAGGAAGCCCCCTGGGCTGATACTGTGCTCCCTGGGCATTGTTCTGAAAATAGTTCCTTTGGTGGGGGGGAGCTGTCCGAGGCTGTGCCGATGCGACAACAAGCAGTTGTATTGTGAGGGACTCAACCTGACAGATATCCCCCAAAACCTGAGCAGCGCCATTGGTTTGTCCCTACGTGAGAATAACATCTCTGAGCTGCGGGAAGGGAACTTTGTGGGCCTGTCACAGCTTACCTGGCTCTACTTGGATCATAACAATATTGAGATTGTCGAGGAGAGTGCTTTTGAGAGGCTGCGAAGGATTAAAGAGCTGGATCTGAGCACCAACCGTATAGAAAGTCTGCCCAACGGGACCTTTAGACCTCTGCCCAATCTGCGAATACTGGATTTATCCTA[T/G]AACAGACTTCAGTCCTTGGAGCCAGACCTTTTCCATGGCCTTAGGAAGCTTACCAATTTACATTTGCGCTACAATGCCCTTAAATTCATCCCTGTGCGGATTTTCCAGGATTGCAGGAGCATGCAATTCCTGGATCTGGGTTACAACCAGCTGCAGAGCCTGGCACGTAATTCATTTGCCGGACTCTTTAAGCTTACTGAGCTGCATCTGGAGCACAATGAGTTGGTGAAAGTCAACCTAGCCCATTTCCCCCGCCTCATATCCCTGCGGACTCTCTACATGAGAAACAATAAGGCCACCATAGTGGTCAACACCCTTGAGTGGACCTGGGACTACTTGGAGAAGATTGACTTCTCCAACAATGAGATCGAGTACATCGAGCCACATGTGTTTGAGAGCGTGCCCAAACTGAACACTCTCATGCTGGACTCTAATAAACTGACTTACATAGATCAACGGATTTTGGACTCATGGACATCACTGAGCAGCATCACACTGTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12867
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000074618 | Nonsense | 395 | 522 | 1 | 1 |
| ENSDART00000133917 | Nonsense | 397 | 524 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 1 (position 43159846)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 42076162 |
| GRCz11 | 1 | 42777326 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ARAAACCGACCCAGAGGCTTCATATATGAGGGCCCAMYAAAAAATCCCTA[C/A]GACCYRCAGGATATGGAGGGTGGGGAAGTGGTGACCAACTCCTTAACAGT
Long Flanking Sequence:
TTCCCCCGCCTCATATCCCTGCGGACTCTCTACATGAGAAACAATAAGGCCACCATAGTGGTCAACACCCTTGAGTGGACCTGGGACTACTTGGAGAAGATTGACTTCTCCAACAATGAGATCGAGTACATCGAGCCACATGTGTTTGAGAGCGTGCCCAAACTGAACACTCTCATGCTGGACTCTAATAAACTGACTTACATAGATCAACGGATTTTGGACTCATGGACATCACTGAGCAGCATCACACTGTCAGGGAATGACTGGGAATGCAGCAGGAATGTCTGTGCCTTGGCTTCCTGGCTTAGCAATTTCCAGGGACAACGTGACAGTGGCCTGTTGTGTGCCAACCCGGACATTGCACAGGGTGAGGACATTCTGGATGCTGTCTATGCTTTTCAGTTATGCGAGGACAATGTGGAAGCAACCACACAGACCTTCACTGTCACCAGAAACCGACCCAGAGGCTTCATATATGAGGGCCCAACAAAAAATCCCTA[C/A]GACCTACAGGATATGGAGGGTGGGGAAGTGGTGACCAACTCCTTAACAGTGACCGCTTCTGCTGATGACCTGGAGAGCACCATGAAGATCCACAAAGTGGTGACAGGAACCATGGCCCTCATTTTCTCCTTTCTGATCATGGTCCTCATGCTCTATGTGTCGTGGAAATGTTTCCCAGCGGGTGTCAGGCAGTTGAGGCAGTGCTTCACCAGCCAGCGTCGCAAGCAGAAGCAGAAGCAGACCATGCAGCAGATGGCTACTACGTCTGCATCCGAGTACTACGTTGACTACAAACCCAACCATATTGATGGGGGACTTGTCATCATCAATGAGTATGGTTCTTGCAAGTGCCAGCAACAGGCATCTCGAGAGTGCGAAGTGTGATATTCCACCCATGTCAGTTTTTACAAATCAATGTATGGGTGGATATGGAACATACGTTAACTTGGCACCCAATTTTGCTGCTCTCAAAAGGAGCTACAGTTCTGGAGTGTGAGTGG
Associated Phenotype:
Not determined