ZMP
pax5
Ensembl ID:
ZFIN ID:
Description:
paired box protein Pax-2a [Source:RefSeq peptide;Acc:NP_571713]
Human Orthologue:
PAX5
Human Description:
paired box 5 [Source:HGNC Symbol;Acc:8619]
Mouse Orthologue:
Pax5
Mouse Description:
paired box gene 5 Gene [Source:MGI Symbol;Acc:MGI:97489]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa19482 | Essential Splice Site | Available for shipment | Available now |
| sa16357 | Splice Site, Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa19482
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000054395 | Essential Splice Site | 277 | 395 | 8 | 11 |
| ENSDART00000076986 | Essential Splice Site | 306 | 424 | 8 | 11 |
| ENSDART00000132602 | Essential Splice Site | 278 | 396 | 8 | 11 |
Genomic Location (Zv9):
Chromosome 1 (position 20633639)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 21105735 |
| GRCz11 | 1 | 21798672 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCAATGGAGTTGATGCTAATCATGCAAGCAATGCTCTTTTATTTTGACA[G/A]GTCGTGACCTGGCCAGCACAACACTCCCAGGATACCCTCCTCATGTCCCT
Long Flanking Sequence:
ATTTTTTAAAATTAGTCTTTTAATTATTAATTTATTTGACTTAGCATAATGTCTTCTTACCTTCTGTAAATCCATATAAGAATATTATTTCAACATTTATATATTATTTGCCATTTTACACGTCACTTGTTACAATTTGAACAATAATCCAAATGAAAAAACTGTAAGTAAACTGTAGAAATTTAGTGAAGTACATCATGAAATGAAGCACTGTTGTTTACGAATCAGTTTACGTCCATTTAAAAAAAAGCTTAACTTCAAGGTATGGTTTAAATGAACTGAGATCATAAACGTCTGTTGATAGTATTCTCACTTGAAGAGGCTGGAACATGCAAACAGTATCCCCTCACAACTAACAAGCGAATAAAAAGGTTAAAGCCAAGTTTACTGAACAATTATAGATGAAATTGCTGCCACAGAGTCACGGAGAAGTCAGATCAATAAACCCTTCCCAATGGAGTTGATGCTAATCATGCAAGCAATGCTCTTTTATTTTGACA[G/A]GTCGTGACCTGGCCAGCACAACACTCCCAGGATACCCTCCTCATGTCCCTCCGACGGGACAAGGCAGTTACTCCACACCCTCCCTCACTGGAATGGTACCTGGTGAGTCTCATACTGAACACACAACCTGATTCAACCAAGTGCAACATCCTGGATCATACTAAAATATAACAAGAATAATCAGATCTGAAGTATATGTTTAGGTAATTTCAAGCGTACAATCAGAGTTTGGTGATTCTATATCATTGGTATTTACACATTAGGTTAGGTTTAGGGGTACACTGTAAAATGTACTGTAAAATTTACAGCACACTTGTAATTATTTATTTACATCACACAACCAAATTTGCTTTTAAGTTACTATAAATTTTAGAGTAGAGATGATGTCTGGGGGGTGGCACGGTGGCACTGTCGCCTCACAGCAAGAAGTTGACATGTCTGTTTGGGGTTTGCATGTTCTCCGTGTTTGTGTGGGTTTCCTCCAGGTGCTCCAGTTTCCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16357
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Splice Site, Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000054395 | Splice Site, Nonsense | 312 | 395 | 9 | 11 |
| ENSDART00000076986 | Splice Site, Nonsense | 341 | 424 | 9 | 11 |
| ENSDART00000132602 | Splice Site, Nonsense | 313 | 396 | 9 | 11 |
Genomic Location (Zv9):
Chromosome 1 (position 20642113)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 21114209 |
| GRCz11 | 1 | 21807146 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCACATGTACACATCTAACATTTCTGTTGTGTTTTCTAACATTTCAGGW[G/T]GAGATTTCYCTGGCAGTCCTTATTCCCATCCACAGTATTCAACATACAAT
Long Flanking Sequence:
TCGCTATATTTCTAAGATCCTCCACCTCCACTTATCACTGTTTTTTCCTCTCCTTCTCTTTGGTTGTGTTGCTTTCTCTCTTTCAGCAGGGGGTCTGACACACACACTCACGTATACACACACACACACACACACACACAGGGGAGGGTGCACAAAACCAGCCAGGCAGAACCGACAGAGCTAGAGATGGAGAGAGAGAGAGAGAAAGGGAGAGAAAGAGAGAGCCGGGCCTCTGATTTTGTGACAGCCAGCAAAGGGAAAGTGTTCCCCTGGGAAAGGGAGAATGAAGAAGACTGGAAAAGAGGGAGAGAAAGAGAGAGGGAGATAAGAGGAAAACTACACTGAAGCAATGGAGGAGAAAAACTGTCACAAATCGACACTTCCACCTAGCCAATTGGATCGGTTAGACGCCTACAAACTGCACGCACGTTACGGGATGTAAAATCCACTGGCACATGTACACATCTAACATTTCTGTTGTGTTTTCTAACATTTCAGGT[G/T]GAGATTTCTCTGGCAGTCCTTATTCCCATCCACAGTATTCAACATACAATGAGTCTTGGAGATTTGCAAACCCAAGTCTATTAGGTAAGGACTAGATGAGTGAAAAGATGAAAAAAACTTGCTCTGGTGATGCGTTTATAGTGATGGATTTAAAACAGGGGTCACCAATCTTGGTCCTGGAGGGCCGGTGTCCCTCATGGGTTTTGCTCCAACTTGCCTCAACACACCTGCCTGGGTGTTTCAAGTATACCTAGTAAGGCCTTGATTAACTTGTTCAGCTGTGTTTAATTAGGGTTGGAGCTAAAATCTGCAGGACACCGGCCCTCAAGGATCAAGTTTGGTGACCCCTGATTTAAAAGTATAATTCAGCCGAAAGAAAACTTTAGCCATTGTTTACTTATAATTATGTGGAAGTCAGCTTGTAACGCAGACTAAACATCTACATTTCACATCTTTTAAAGCAATTACAATGATTTGTTGGGGCAGCACGGTGGCTCAGT
Associated Phenotype:
Not determined