ZMP
ptpn13
Ensembl ID:
ZFIN ID:
Description:
LOC569591 protein [Source:UniProtKB/TrEMBL;Acc:A4QN87]
Human Orthologue:
PTPN13
Human Description:
protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) [Source
Mouse Orthologue:
Ptpn13
Mouse Description:
protein tyrosine phosphatase, non-receptor type 13 Gene [Source:MGI Symbol;Acc:MGI:103293]
Alleles
There are 12 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa16302 | Essential Splice Site | Available for shipment | Available now |
| sa37241 | Nonsense | Available for shipment | Available now |
| sa23860 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa16302
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000098081 | None | None | 299 | None | 6 |
| ENSDART00000109442 | None | None | 2525 | None | 70 |
| ENSDART00000111101 | None | None | 1302 | None | 24 |
| ENSDART00000141947 | Essential Splice Site | 111 | 140 | 2 | 3 |
| ENSDART00000144506 | None | None | 2475 | None | 49 |
Genomic Location (Zv9):
Chromosome 21 (position 8854650)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 9349509 |
| GRCz11 | 21 | 9442242 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTAAAATAGACAGCAGTCTGGGCATTAGTGYCACGGTACTGTTTGGAAAG[G/A]TTTCCGCTCTTTGTTTTTCTTCTTTATTCCTCTTTTACTTACNNTTTGTG
Long Flanking Sequence:
AGTGTACTTTAAACACTCATGCTGCCACGTCAATTTTAATAAATGTTCATACCAGGTGAAAACAGACAAAGTCAAATTTGAAATACCTCCTTATTTTATGTATTTAATTTGACAAACATTGATTACATATTTCTTAAGAGCTCTCTTATCACTATTTAGGGTTAGCATTGACTGGCTTCCAATGCCAAATGTTTTAGATATCAGTAAACACACACTTACTGCTCTTGCTTTTTTTTTTTTCTGACCGATTGCATTTCTGAATGTAAATGCAATGCAGTTTTGCATGTCGACAGCATTAACCTTTGTCCCTTGCATGTGCACGGCCTCATATTTACATCGGTCTTCTCTGTTTACAGGGGGTTTCTCCCATCACCATCACGGAGACTTTAAGTGCTAGTAGCCCAGACGTCAATAGCCTCCACCCTGGAGATCTATTTGACATTGAGCTGTCTAAAATAGACAGCAGTCTGGGCATTAGTGTCACGGTACTGTTTGGAAAG[G/A]TTTCCGCTCTTTGTTTTTCTTCTTTATTCCTCTTTTACTTACTTTTTGTGTGTGTGTGTGTGTGTTGTTTTTGTGCCCTTAGCCGTCGCTCCTTTTTGAAGCTCCTCGCTTGGCTTCAGTTTTGGGAAAGTAGATTTGACTCTTTGCATGCAGATTTTTTCAGGCATTTGAGTTGGCTCCTTCACTAACGGTAAAAGCCAAACACAGTAGGTAAAGACGAGTGCAGATGCACGCACAGATGCAGATGAATTGTGTTTTTAAAAGGGATAGTTCACCCAAAATCAAAAAGTCCTTGTTAATTTGCTTACCCACACCTCATACAAGATGTAGTTTTTTGTTCTTCCGTAGAACATTGAAGAAGATTTTTAGCTGAACTTGCTGTTTTTTGGATTAATATAATGGCACTGAATGGTGACAAGTTTTTGAGATTAAAAATAAATATACAAACTAAAATGAGTCCAAATCAATAGCCGTGCACGGAAAAAATGCTTTTTTGTCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37241
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000098081 | Nonsense | 49 | 299 | 2 | 6 |
| ENSDART00000109442 | Nonsense | 2275 | 2525 | 65 | 70 |
| ENSDART00000111101 | None | None | 1302 | None | 24 |
| ENSDART00000141947 | None | None | 140 | None | 3 |
| ENSDART00000144506 | Nonsense | 2225 | 2475 | 45 | 49 |
Genomic Location (Zv9):
Chromosome 21 (position 8904791)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 9299367 |
| GRCz11 | 21 | 9392100 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATTATTTCCTCTCTAAGAACCTACAAAACCTGCGGCCCCTGGACGAATG[C/A]CTGATCGGCCAAACCAAAGAAAACAAGAAGAAAAACCGCTACAAGAACAT
Long Flanking Sequence:
CTAACATTAAAAGTCAACATATTATTTTCCATGTTGCTTTAGATCATAGAATCCACTCTACTCTTCCAACCAAATTCTACATTTTAAGCCGAACCAATCATCGCATGTATTTGCGTGTTTAAAATAATTATTTATAAATATTTATTTATTTATTTTAAATGCAAATATAGAAATGAAAAAATAACTTGAAAAAGTGTTGAAAATTGAGGGGGAAAAAGTTTTTTAAAATGTCATTTATTATTTCACGAATCTTTAAATACATTTAATTTAAATATTAATATCACTTTATTATTATTTTTTTAAAGTTATATGTATGTAAAGTGGAAATGTAAAATATATACATTTGAATGGCTGTATAATTTTATTTTTATTATAATTTTTTTAACTTAAATGAAAATTTGGAAATGAAAAGAAATTATGTTGTAATTACAACGAAAAACTCATGTTGCATATTATTTCCTCTCTAAGAACCTACAAAACCTGCGGCCCCTGGACGAATG[C/A]CTGATCGGCCAAACCAAAGAAAACAAGAAGAAAAACCGCTACAAGAACATCGTCCCCTGTGCGTAAACACAGCAGCGATAAATATAACATCACAAACATCTCCATCATTTATTCGCACTAAACTCGCTCCTCTTCTCCAACAGTCGACACCACCAGAGTCCTCCTAGGAAACGACGGCGGCTACATCAACGCAAACTTCATTAAGATGGCGGTGAAGGACGAGAGCTTCATGTACATCGCTTGTCAGGGCCCTCTGCCCACCACGCTGGGGGACTTCTGGCAGATGGTGTGGGAGCAGAAGTCTAACGTGATCGCCATGATGACACAGGAGGTGGAGGGAGGAAAGGTCAAGTGTCAACGCTATTGGCCTGATACTCCGCGCTCGCCGCAGATGGTGGACGACAGGCTGCAGGTCACACTGGTCAAAGATCAGCATTTGGACAACTTCGTCATCAGACTTATTGAGCTGAAAGACGTCCAGGTGAGAGAGAGAGAGAGAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23860
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000098081 | Nonsense | 272 | 299 | 5 | 6 |
| ENSDART00000109442 | None | None | 2525 | None | 70 |
| ENSDART00000111101 | None | None | 1302 | None | 24 |
| ENSDART00000141947 | None | None | 140 | None | 3 |
| ENSDART00000144506 | Nonsense | 2448 | 2475 | 48 | 49 |
Genomic Location (Zv9):
Chromosome 21 (position 8908896)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 9295262 |
| GRCz11 | 21 | 9387995 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACATATCAGATATTGTGCGCACCATGAGACTCCAGAGGCAGGGCATGGTA[C/T]AAACAGAGGTAATCAATCAATCATAATGCATGCATCGACATTAAACAGTC
Long Flanking Sequence:
ATTACTAGTATTGTTATTATTATTATTATTATTTTTAATAATAATAATATTAGTAGTAGTAGTATTATTATATTATATATTATTTTATTTTATGTATATATATATATATATATATATATATATATATATATATATATTGTTTTGCATTTCATATTATTATTTTGCAAATATATCATTCATATTTCATAAGTTATGTTTTAATTTCAATGTAAAATTATATTAATGATATAATCATATGATTAACATTAATTGATACATTAAATTATAAATATTTATTATGTAGGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTGATGAGGCATCTGCACCTTTTTTATAATAATATTGTATTCTTGATATTTCTTTCTATTAGTTTGACATATCAGATATTGTGCGCACCATGAGACTCCAGAGGCAGGGCATGGTA[C/T]AAACAGAGGTAATCAATCAATCATAATGCATGCATCGACATTAAACAGTCTACGCTGCTGTCTTTTTGCATGTAACATTTTTCACTGTTTTTCCTCTTCAGGAACAGTACATATTCTGCTATCAGGTGATTCTGTATGTGCTGCGCTGCCTCCAGGCGGAAGAGGAGCTGTCAGGATAACAGCTCAAAACACCGTCAATACTTTTATTATCTCATCAGAACAAAACTAAACAAACAAAAAAAAGTCTTAAGATGTTCCAGACGTCAGTGACGTGTACAATTCTTGCAGATTTATTTTTTTTGTGTTTTCTTATCGCTTACATTCTTGACCATTGGCTGCTACTACTTCTATGAGACCATTTGTTTTATAATTTATCTTTTTTGTTGTTTTTGGTATAAAAACAAACAGTTTTTATATATTCCTTAATGATTATGGATCAAATAAGAAAAGGAAATGAATTCTTTTTATTTTTTGTGGTACAGAATGATTCTTGTAGATGT
Associated Phenotype:
Not determined