ZMP
phgdh
Ensembl ID:
ZFIN ID:
Description:
D-3-phosphoglycerate dehydrogenase [Source:RefSeq peptide;Acc:NP_955871]
Human Orthologue:
PHGDH
Human Description:
phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:8923]
Mouse Orthologues:
Gm6756, Phgdh
Mouse Descriptions:
3-phosphoglycerate dehydrogenase Gene [Source:MGI Symbol;Acc:MGI:1355330]
predicted gene 6756 Pseudogene [Source:MGI Symbol;Acc:MGI:3647509]
predicted gene 6756 Pseudogene [Source:MGI Symbol;Acc:MGI:3647509]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa16263 | Nonsense | Available for shipment | Available now |
| sa1248 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa16263
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000012938 | Nonsense | 197 | 528 | 6 | 12 |
Genomic Location (Zv9):
Chromosome 9 (position 49191443)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 48506513 |
| GRCz11 | 9 | 48203908 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGGTGTCTGCSAGCTGGGGTGTGGAGCAGATGACTCTGGATCAGTTGTG[G/A]CCGCAGTGTGAYTATATCACAGTCCACACTCCYCTCATGSCCTCCACCAC
Long Flanking Sequence:
CCCACTGGCCTCTGTCCATCATAACCTCCTAACCATCCCCATATCATACTTGGCTTCATCACTCTGTCTCCTCTCCACCAATCAGCTGGTGTGTGGTGTGCAGTCTGGCGCTAAAAGGCTGCCATTGCATCATCCAGGTGGATGCTGCACACTGGTGGTAAATGAGGAGATTCCCCCTATTGTGTAAAGCGCTTTGAGTGCCCAGAAAAGTGCTATATAAATGTAAGGAATTATTATTATTATTATTATTATTATTATTATTATTATTATTATACACGCAAATTTTGTTTTGTAGCACTCTAGCTTAAGACCGACAAACTTATACTAACATTCAAACTTTATTTTATTGTCATGGGACCTTTTTAAAAACTGATTTGACTTGAAAAGCATTATAAATATAATCTTTTGCATCCCTGATAGACCATAGGTTATGACCCGATCACTCCTCCAGAGGTGTCTGCGAGCTGGGGTGTGGAGCAGATGACTCTGGATCAGTTGTG[G/A]CCGCAGTGTGATTATATCACAGTCCACACTCCCCTCATGGCCTCCACCACAGGTACATACAGTCATAACAGCGCATGAGAATGCGTTTGACAAATTAATATGCATTTTAAATTCTGGTTCTTAGATGGCTTGACTAAAGATTTAGGTTCTAAGATACTTGCATGTAAATTAATTATATATAAGAATGCTTAATATACAGGTTGGGCCATTTGTATGGATACACCTTAATAAAATGGAAATGGTCGGTGATATTAATGTCCTGTTTGTGGCACATTAGTATATGTGAGGGGGCAAACTTTCCAAGATGGGTGGTGACCATGGTGGCCATTTTAGTCTTTCATGAGTTATTTACAAGTTTTTGACCACTTTTAAAATGTGTTCAATGTGCTGCCCATTGTGTTGAATTGTCAATGCAATTGGATTGTGGATCTCAGAAGTGTGCAACTGAATACCATTGGAGAAGATCACATATTCTTTGAGAGGAAAGGATGAAATATTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1248
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000012938 | Nonsense | 467 | 528 | 11 | 12 |
Genomic Location (Zv9):
Chromosome 9 (position 49176773)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 48491843 |
| GRCz11 | 9 | 48189238 |
KASP Assay ID:
554-1163.1 (used for ordering genotyping assays)
KASP Sequence:
CGACAGCCTGTTCCTCTGACTGGACACCTGCTGTTCTTCAGGGCCAATTG[T/A]TCCACGGAGTTCCTGTCCTCCATAACCGGTAAACACTCATTCACATTCTG
Long Flanking Sequence:
AGCTAAAAGTGCCCCTTACAAACCCATAGATCAGCTGAATAGATTTTAAAATGGTAAAACTCAGGGAATTATAAAAATTGTTTTATAAAATATTTTGTATAAAATATTTACAAAAAAGTGGATGCTAAGCTAAGCTAAAAGTCTTCCCGCCAGACCCGTAGATTGGCTAAATGGATTCCGAAACGGTAAATCTTTGGGAAAGTTATAAAATGAGCCTATTTCCAAATAAGTGGAGTGTTCTTTTAAAGCACAAGCTCAATGGTGCTCTCCCCCCCAGAAGCTCTGGTAATCTGTTGGATTCTCAAACTGCAGGTGCACACAGATCATAAGGCCTCGGATGAGCGGGAGGCATGTGTGATGGAGGTCTCTGTGAACGGCAGCCGTTATAAGGCTGTTGGTTCAGTGCAGGCTGGTGTTCCTGTGCTGTTGGAGCTCAATGGAAGTGTGTTTCGACAGCCTGTTCCTCTGACTGGACACCTGCTGTTCTTCAGGGCCAATTG[T/A]TCCACGGAGTTCCTGTCCTCCATAACCGGTAAACACTCATTCACATTCTGCACAAATGCTCTCTAAAAAGAAAGTTCAACCTAAAATGAAAATTTATTTAGCATTTATTCACATTTAAGTGGTTATTCTGAAGAATGTGGGGGGAGAAAGGAGCCATTGACATTCATAGTAGGAACAAAAAAAAAAATACTATGGAAGTCAATGGCTGTTTTTTCCCAACATTCTTCAGTATATCTTAAGAAACTCAGTCAGGTTTGCAGTAAAATAATGACAGAATTAAACATTTTGTGGGAACTATTCCTTTTACTGCAAGAATATCTTGGATGACTATGTGCAGGGCTTTCATATATATATTTCAATATGAGTAATTTTGGTATTTTTTCGTTCTGTTCTTAAGTATTGGACAGATACAGATTTTTAGTAATGTAATTTCTAGAAGATAATGTTTGAAAGTTGATATAAATAATTGCAAACCATTGGAAGTCATTAGTCGAAAGTCA
Associated Phenotype:
Not determined