ZMP

tnfa

Ensembl ID:

ENSDARG00000009511

ZFIN ID:

ZDB-GENE-050317-1

Description:

tumor necrosis factor, alpha [Source:RefSeq peptide;Acc:NP_998024]

Human Orthologues:

LTA, TNF

Human Descriptions:

lymphotoxin alpha (TNF superfamily, member 1) [Source:HGNC Symbol;Acc:6709]
tumor necrosis factor [Source:HGNC Symbol;Acc:11892]

Mouse Orthologues:

Lta, Tnf

Mouse Descriptions:

lymphotoxin A Gene [Source:MGI Symbol;Acc:MGI:104797]
tumor necrosis factor Gene [Source:MGI Symbol;Acc:MGI:104798]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa16250	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa16250

Status:

Available for shipment
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Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

G > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000025847	Essential Splice Site	68	234	2	4

Genomic Location (Zv9):

Chromosome 19 (position 27505511)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	27435623
GRCz11	19	27019846

KASP Assay ID:

2261-3380.1 (used for ordering genotyping assays)

KASP Sequence:

AWGKCTCTGTTTCTCTCTCTAGACCCAGGGCAATCAACAAGATGGAAGTG[G/T]WGAGTTTCAAATCTTCTTTGTCAGAGTTAAATCAGGTTATTTTGTTTTTT

Long Flanking Sequence:

GTGGGTGTGTGTGTTATATGACATCACTGGAGTTTCCCCTTCCTCTTCAGATCTTTAAAAAGAAAGAAGAAGCAGTTATTCTGAACATTACACTGATAGAACAACCCAGCAAACTCGATTTGACTTAACAAGACCTTATCAAAAGCATTTACACTTGTAGAATCTTTAAGACATACAGCAATTATGAAGCTTGAGAGTCGGGCGTTTTTGGATGTTGAAGAAGGAGAGTTGCCTTTACCGCTGGTGATAGTGTCCAGGAGGAAAGCTGGATCTTCAAAGTCGGGTGTATGGAGGGTGTTTGGGATCATTTTGGCTGTGGGCCTTTGTGCCGCTGCTGCCGTCTGCTTCACGCTCCATAAGGTGAAAATCCTGCCCCGTACATATTACAAAAATCTGTTATTGGTGTTTTAAACATGCAATTGCAGCTACATATTATCAGTTGCATAATCAATGTCTCTGTTTCTCTCTCTAGACCCAGGGCAATCAACAAGATGGAAGTG[G/T]TGAGTTTCAAATCTTCTTTGTCAGAGTTAAATCAGGTTATTTTGTTTTTTGTGAAACTCAGTCATCACACATGAATCATTTTTTCATGTCTTTGTCTTATCAGTGCTGAGACTCACATTGAGAGATCGCATTTCACAAGGCAATTTCACTTCCAAGGCTGCCATCCATTTAACAGGTGAGTGAGATTTTGAACCGCCACAGTAAACCAGCAGAAAATGACTGAAAAGCAACTTAATTATTTAATGTTCAATCCACTAAAATTTGTAAAACAGATTAAGTTAACTTAATTGATTTGTGTTGGGACAACATTGTGTGGAACCCAACATTTTTTTACAATGTGGGCAAAATATGGACAAACCGGACCATTAAAAAAAGTGGGTTTGGGTTTGTCGATATCTGAGCCAAATTTGGGTTGAATCAATTCTGCATTTTTTTGTGTGTAAAAGGATTGCAATTCTTCACTCCTAATGTCACAAATGTTTTAGTTAATGTTTTACTCC

Associated Phenotype:

Not determined