ZMP
zgc:158271
Ensembl ID:
ZFIN ID:
Description:
Protein tyrosine phosphatase domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:A1L1R5]
Human Orthologue:
PTPDC1
Human Description:
protein tyrosine phosphatase domain containing 1 [Source:HGNC Symbol;Acc:30184]
Mouse Orthologue:
Ptpdc1
Mouse Description:
protein tyrosine phosphatase domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:2145430]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa14206 | Nonsense | Available for shipment | Available now |
sa16175 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa14206
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000088177 | Nonsense | 541 | 713 | 7 | 10 |
ENSDART00000141320 | None | None | 169 | None | 6 |
The following transcripts of ENSDARG00000061656 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 11 (position 28393684)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 11 | 27269670 |
GRCz11 | 11 | 27516844 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CACRCAACATTTCAAGGATGTTCCCATTTTAACRCTTCAGAGTGAACTCT[C/A]GCCTGAGAYTCGTCATCTGTTTGTGGCCAAAGCTCTCACTGTGGACCTTG
Long Flanking Sequence:
CTGGAGGTGGCCGACAGTAGACAATACCTACAGGTCTCGGCTCATCTTAAGCAAGTGTTTTAGCTATAGTGACTCCGCTTTGCACAAACTAGACCCAAGGGTACACGTGCTACAAAGTCCCCAAAATCTTGGCAGCAAATCTGGGTTAAACTTTTCCGAGCTTTATGCATCTCAGAACAGATTAGCTCTAGAAACTCCTGATCTTCTGCCATCAGATATCAAAAGCAGCCCCAAACATGACCTTTTAACTGGTTCTAGGAGCTCCTTGGTACAGTCCAAAAAAATTGAAGAGCAAGTATCCTGCTCTCCCGCCTCTGTAAAACAGGCACCTCTGAAAGTGGCCAAGCGCAGCATGTCTTATGGATTTCTAGGGAGGACTAATGACAGCAGTACAATGTTTTCAATATGTCAAGTCGGCAGAAGCACTAACAAAAACTCAAACTGTGATGTCACGCAACATTTCAAGGATGTTCCCATTTTAACGCTTCAGAGTGAACTCT[C/A]GCCTGAGACTCGTCATCTGTTTGTGGCCAAAGCTCTCACTGTGGACCTTGATGGAGAGGAACTCAGGAGTAAAGTCTCAGTGTGGCAGGTAGGAGTGTGCAGTAGATATTTGAGTCTTCAATTCTTTATCACGTTCCTCTGTATCATGATCTTTTTCTGTTGTCCCTCAGATGGAGCTGAACTCTCGTGAAGGTGCATGGGAGAGGCTGTGCAACGAGAGAGATCCAGTGGTGCTCTCACTGCTCATGTGGTCCTGGCTGGAGCAGTTGAAGGAGCCCGTCATCACAAAGGACGATGTGGAGACTTTGTCTGGAAACAGACTGAATCCAGAGCATGCGCTGAATTCACTCGACAAGGTACCAAGGAACATGTAACAATGTGATTTGAGGAGTGCTTCACCAAATGAGTACTGCTTTCCATATTTTCATGAAAACAACAAAGAATTTTGTATTTTGCTATTTTTATATTTGGTTGAAAATGGTGACATTTAGGCCCAATCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16175
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000088177 | Nonsense | 569 | 713 | 7 | 10 |
ENSDART00000141320 | None | None | 169 | None | 6 |
The following transcripts of ENSDARG00000061656 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 11 (position 28393599)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 11 | 27269585 |
GRCz11 | 11 | 27516759 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTCACTGTGGACCTTGATGGAGAGGAACTCAGGAGTAAAGTCTCAGTGTG[G/A]CAGGTAGGAGTGTGCAGTAGATATTTGAGTCTTCAATTCTTTATCACGTT
Long Flanking Sequence:
AAACTAGACCCAAGGGTACACGTGCTACAAAGTCCCCAAAATCTTGGCAGCAAATCTGGGTTAAACTTTTCCGAGCTTTATGCATCTCAGAACAGATTAGCTCTAGAAACTCCTGATCTTCTGCCATCAGATATCAAAAGCAGCCCCAAACATGACCTTTTAACTGGTTCTAGGAGCTCCTTGGTACAGTCCAAAAAAATTGAAGAGCAAGTATCCTGCTCTCCCGCCTCTGTAAAACAGGCACCTCTGAAAGTGGCCAAGCGCAGCATGTCTTATGGATTTCTAGGGAGGACTAATGACAGCAGTACAATGTTTTCAATATGTCAAGTCGGCAGAAGCACTAACAAAAACTCAAACTGTGATGTCACGCAACATTTCAAGGATGTTCCCATTTTAACGCTTCAGAGTGAACTCTCGCCTGAGACTCGTCATCTGTTTGTGGCCAAAGCTCTCACTGTGGACCTTGATGGAGAGGAACTCAGGAGTAAAGTCTCAGTGTG[G/A]CAGGTAGGAGTGTGCAGTAGATATTTGAGTCTTCAATTCTTTATCACGTTCCTCTGTATCATGATCTTTTTCTGTTGTCCCTCAGATGGAGCTGAACTCTCGTGAAGGTGCATGGGAGAGGCTGTGCAACGAGAGAGATCCAGTGGTGCTCTCACTGCTCATGTGGTCCTGGCTGGAGCAGTTGAAGGAGCCCGTCATCACAAAGGACGATGTGGAGACTTTGTCTGGAAACAGACTGAATCCAGAGCATGCGCTGAATTCACTCGACAAGGTACCAAGGAACATGTAACAATGTGATTTGAGGAGTGCTTCACCAAATGAGTACTGCTTTCCATATTTTCATGAAAACAACAAAGAATTTTGTATTTTGCTATTTTTATATTTGGTTGAAAATGGTGACATTTAGGCCCAATCCCAATTCTACCCCTTAGCCCTTCCCCTTACCCCTCGTTTTGCACGTTCATGTGAAGGGTTAAGAGTGTCTCAATTTTTTTTTTTTA
Associated Phenotype:
Not determined