Busch Lab

ZMP

whsc1l1

Ensembl ID:
ENSDARG00000062765
ZFIN ID:
ZDB-GENE-050324-2
Description:
Wolf-Hirschhorn syndrome candidate 1-like 1 [Source:UniProtKB/TrEMBL;Acc:A5XBQ2]
Human Orthologue:
WHSC1L1
Human Description:
Wolf-Hirschhorn syndrome candidate 1-like 1 [Source:HGNC Symbol;Acc:12767]
Mouse Orthologue:
Whsc1l1
Mouse Description:
Wolf-Hirschhorn syndrome candidate 1-like 1 (human) Gene [Source:MGI Symbol;Acc:MGI:2142581]

Alleles

There are 9 alleles of this gene:

Allele Name Consequence Status Availability
sa14276 Nonsense Available for shipment Available now
sa16134 Nonsense Available for shipment Available now
sa21713 Essential Splice Site Available for shipment Available now
sa11365 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa14276
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000091115 Nonsense 46 1521 1 22
ENSDART00000138045 Nonsense 46 1361 2 21
Genomic Location (Zv9):
Chromosome 10 (position 20668384)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 20629798
GRCz11 10 20587179
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GACAGGAGGAYGTCKATGAAGCCATCAGTGACCCAGGAGATGATGGAGGA[C/T]AGCAAAACTTTGATTCTCCTCTGGAGTCCGGCTTTTCATACCCMGCTGAA
Long Flanking Sequence:
CATGCAAAATATGATTTAATTTAATTAATATTAATGCATTTCTGTGCGATGAAATTAACGGTGAATCAAAGGAATTTAATGTGACGAAAATGGCACTGCACAGCTTTGATTGGATTCCAATTACAAAATCTCATTTATGCATGAGTTTTCCTCTTTAAAAAATCTTAAAAAGTTGGCATAACTTCGAGCAGATTAGAGGAAACTTTATTAATCCCTTGGGAGGGAAATTGCAGCTTTGCAGAACAGCTTCATTGGCATTAGCCAAAAACAAGATGCATGTTTTAAATGTGTAATATATGCACTCTGTCTTTATCTCAGCAGGCCCTGTAAGAAAAAGGGAAACTTAAGGATGCTGGAGCAGAACAATGGATTTCTCCTTCTCTTTCATGCAAGGGATCATGGGAAACACAATTCAGCAACCCCCTCAGCTTATTGACTCCGCTAACATCAGACAGGAGGATGTCTATGAAGCCATCAGTGACCCAGGAGATGATGGAGGA[C/T]AGCAAAACTTTGATTCTCCTCTGGAGTCCGGCTTTTCATACCCAGCTGAAGACGTCCCAGTCATTACAAATGGTTACCCTACGGGTGTAGGTACCTATGAGCAACAGGCCAAGTTTGCCTTGTACTCTCAGTTCCCCAATGGTTCAGCTAATGGCTATGGTGCCATACGAAACTATGGAGATCACAGTTTGCTGCTTGGTGAGGGCACAGTATTGAGACCACCAGTGGTCCAGGAAAAACCTCAAACTCACATCTCACCTCCATCTCATTCCCATCATCACCAGCAGCCTCATCATCCACATCACCACCACCATCAGCAGCAGCAGCAACACCACCCACACAACCCACCTCTGTTACCTCACCACCACCACCACCACCCACCTCCTGCCTCGCACCTAATGCCTCAAGTCCTGCCACCTCCTCCTCCCTTGCTCTTACCTTCATCTCCACCCCTTCTCTCACCTCAAGAAAGCACCATCTCCAACCCCATTGGGCAACCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16134
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000091115 Nonsense 369 1521 2 22
ENSDART00000138045 Nonsense 369 1361 3 21
Genomic Location (Zv9):
Chromosome 10 (position 20667322)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 20628736
GRCz11 10 20586117
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATGARATTGGTGACTTGGTGTGGGCAAAAGTTGGGACGTATCCTTGGTG[G/A]CCATGCATGGTGTCATCAGACCCACAGTCGAACGTTCATACACGTATTAA
Long Flanking Sequence:
TCATTAAGACCTATCAGAATGGCAGGGAGCTCTTTGAGTCCTCGTTGTGTGGAGACCTCCTGCAGGAGTTTCAGGCCGGCGAGGATTCCAGGAGACAACATGAGCAGAAGAAGGAGAAGAGGAAAAAGAGAGGCAGCAGACATGGCGCTGGTCATGAAGAAAGCCAACAGCCAAGCAAAGTTGAGGAGGAGCGGTCAGTTGTGGTGCACAACCCTGTACAGACCACTGAAAGTCAGGTCGCTTTCAGAGAAGAGCAGCAGCCACAGTCAAGCCTCAAAAGCCCCAAAGCAGAACTCAAGGAGCAGAAGGTGAGTGTCCTGTTTCAGACACAATAACATGCGAAAAACCTGTAGTTTATAAGATTCTGTTCATCCAAGCATGTGTTGTCTTCTTGTTTAGGTGGAAAAGCACTGTCCTTCGGTCATCACTAGCACTGGCACTTCTCAAGAGTATGAGATTGGTGACTTGGTGTGGGCAAAAGTTGGGACGTATCCTTGGTG[G/A]CCATGCATGGTGTCATCAGACCCACAGTCGAACGTTCATACACGTATTAATACAAGAGGTAATTAATCTAAAACAGTATAATGCAAGTAGAGGTTCTTAAGGGGCCATTCACATTGCATCTAACAGCGTGTGGAAAGTGTGAGACACGTCGCTTCCTTCACCAGTTTTAATGTGCTTTGCGCTCGCGCTTCCATGTCATTTGTCATTACTAGGTGACTATCGAACATTTTCTCAGAGTATGAAAATCTGACAACATTGCTGCAGCTCTGATACAAGTTTTATTAATGGAAAAAGCCATAAGCTGTGGACCTCCATTGGAAAGAACGAACTTGTGCATAGAAAAGACGTCAAATGTGAACGGGTACTAAGTCTGGTAAACACTACACAAGCAATTTTAAAACACTAGTGCCTGTTTTCACTGAGGGGTACAGAACAGTACAGATTAGAAGTCAAACTTGCCTTTCCACTGCCATAACTTGTGTGCCTCAGAAAGTTGCCAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21713
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000091115 Essential Splice Site 857 1521 10 22
ENSDART00000138045 Essential Splice Site 857 1361 11 21
Genomic Location (Zv9):
Chromosome 10 (position 20658399)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 20619813
GRCz11 10 20577194
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCCAACAGTGGAAAAGAGAGTGAAACTGTGTGTCAGGAGTGCAAGACAG[G/T]TGAACAATACGTCTGATTTGGGATCAGATTTTTAAAGGCTATTTTGAAAC
Long Flanking Sequence:
AGTATTTTAAAAAACAGTTTATTTCTGTAATGTCAAAGTTTAGAAATATTTAAGTTTTGGTGTTTTTGTATATCCCCTTCTGGATTCTATGATGAGGGGAAAGTAAAACAAAGAATTGTGAACAATGTGATGGTCTTTACTTGTACATTTAATGAGTTATGTCTGATTCCACCTTCTGTGGTAAATGGTTAATTTTACTGGTTATATTGAATCTGAAATGTCTTTGATAAAGTTTAATTTGAAAGATGAGTTCATACTGTTATTTAGTGGTATTAATGAAAGTTGCAGGATCCACAGAAATGTAACGCAATCATCAGACTTTTTTGGATGTAATTAAAATGTCATGTTTTGGTTTCACTGTTCAATGTCTCAGGTGTGTGAGACGTTTGGGGATTCTTTGGTAAGCTGTGAGGGAGACTGTAACAGGCTGTTTCATCCAGAGTGTATGGGATCCAACAGTGGAAAAGAGAGTGAAACTGTGTGTCAGGAGTGCAAGACAG[G/T]TGAACAATACGTCTGATTTGGGATCAGATTTTTAAAGGCTATTTTGAAACTTGTTTACATGAAAATTAAGCTTGTACAATGAACGGCTCATTGCTGTAATTTTCTTAATGTGAGTGCTGAGAATTGAATGTAATCTTAATCTGTTTGTTACTGTGTCTTTCTGCAGGTTCCCACCCTTGTTTCTCCTGTAAGGTCACGGAGGGTGATATGAAGCGGTGCTCAGTAAACGGTTGTGGACGTTATTACCATGAAACCTGTGTCCGGAAGTACACTGGCTCCGCCTCTGACACCAAAGGCCTGCGCTGCCCTCAGCACAGCTGTGCCACTTGCTGTCTCGACAGAGACCTTCAAAAAGCTGGCAAAGGTACACAACAGATATAAGAAATATTTGAAAAATTAGACTGATGAAATGAAAAAATTGTGTTGGGCAGATTAAAAGATTAATTGCATTCAAAATAAAAGTTTGTTTTAAGATCAATACAGTGTTCAGCATAACTGAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11365
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000091115 Essential Splice Site 1044 1521 14 22
ENSDART00000138045 Essential Splice Site 1044 1361 15 21
Genomic Location (Zv9):
Chromosome 10 (position 20646386)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 20607800
GRCz11 10 20565181
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGAAGCCCCACTATAAGCAGATAGTCTGGGTCAAGTTGGGCAACTACAGG[T/C]ACGTCTTTTATACTGTTGGAAGTCTCCTCCGATGCATTTAACTAAACTAA
Long Flanking Sequence:
TGCATCACTGCATGTTTCCCATAATGCCCCCCTTTGATCATTCACTATTGGCTGCTTATTAAATCACACTGCGCGAAACAAGCACATTAACATGATGCATAAAAGGCGTCAGTCAACAAACCATGTCTTTGAGCATGTCGAATTGAGCTTTACATTGGCATTCATAATCTAGACATTTTTCAGAGGCACATGTTGATCTAAAACTAACGACACAGAAATGTCTGATTCTGACATGCTCACAAATGAGGTTTTTTGAATTTCGCCTAATTTTGGCATGTGGTGATTCTGTGGGTCTGTGTATTCGATTGTGTGTTTATGTGCGTGTGTGTGCTTGTCAAAAAGGAGGAAGACTGTTGTGTTGCGAGGCCTGTCCTGCCTCGTTCCACCCTGAGTGCTTGAAAATAGAGATGCCGGAGGGGACGTGGCTGTGTGGCGAATGCAAATCGGGCAAGAAGCCCCACTATAAGCAGATAGTCTGGGTCAAGTTGGGCAACTACAGG[T/C]ACGTCTTTTATACTGTTGGAAGTCTCCTCCGATGCATTTAACTAAACTAAAAGCATGTTCATGCCAAGGCTAATGTGTCTGAAGGGCTTTTTCACACTTGAAGTTAACCGTGTCATTTAAACTACATTTTAAAAAACATTCTGTTTTTTTTTTCACACACTGAACTTTAGTATGTTAATGTACTTTCAACTAAAATAGAATAATGAGTAGGGGGAGGGGCTTTTCTTTGCACGTCATGCCCTTAAAGCAAATTAACAGTAGGAGGGAGAGGGTTATTAATATGCAGTTGCTATGGAAGCCCTCGCGTTGTCAACTAAAGGACTCCCACTTCAAACACTGAAGCAAATGATCAGAATTTCATTGGAGTTACCAAAACAAACTATTTCTTTCTGTGGATTAACTTGCAAGGGCTACAAATGAATAATATTATATATATAATATAATAATAATAAAATAAAAACAAAAGCTATTTTTGTTAATATTGCTAATATTGTTAATTT
Associated Phenotype:
Not determined