ZMP

zgc:92567

Ensembl ID:

ENSDARG00000001621

ZFIN ID:

ZDB-GENE-040718-491

Description:

nuclear transcription factor Y, alpha like [Source:RefSeq peptide;Acc:NP_001002731]

Human Orthologue:

NFYA

Human Description:

nuclear transcription factor Y, alpha [Source:HGNC Symbol;Acc:7804]

Mouse Orthologue:

Nfya

Mouse Description:

nuclear transcription factor-Y alpha Gene [Source:MGI Symbol;Acc:MGI:97316]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa16050	Essential Splice Site	Available for shipment	Available now
sa44686	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa16050

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000003493	None	None	399	None	8
ENSDART00000135973	Essential Splice Site	None	336	1	8

Genomic Location (Zv9):

Chromosome 8 (position 25887269)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	8	25015187
GRCz11	8	25034326

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

AGATCTGTAGTGGAGCCAATCAGAAGGGAACCGGACAGCCGGAGAAACGG[T/C]AAAGGGTTGCGCTTGCTCTAAGGGAAATGGTAGCTGACAACACGGATTGG

Long Flanking Sequence:

TATGACGAAGAATGTTAATTAAAATGTGTATCATATTCACATGATACAAATCAATATATGAAGCTGCACAATAACAGAAAATAACATTTATTTAACATTCTGCGTTATTTCTACGTAAGCGAATTGTTCAAACTCAACATTTTATTTCAGTTGTATACAACAATTCATCTCACAGCCCAAATTGTGGCAATATACAAGCTCATAACGTCGGATGCGATACGTAAACAATACAAGCAAAGCACTCACATGTTCCCCTCGCTCTTCCTTCACGGTGACATTATTCCGGAAACCGTGAGTTTAACCAGGTACGCATGCGCTGCAGTGGTTCGATTGTACTCGGGCAAACTCGGCTCCGTTCGCCGATCACATGCGCCAAGCCTGCCCCCTTTCTTCTCTGTGTGGCTCATTTTACGCCATTTTGTCCGCACCACTGTGTTGATTGGGTTTTTGAGATCTGTAGTGGAGCCAATCAGAAGGGAACCGGACAGCCGGAGAAACGG[T/C]AAAGGGTTGCGCTTGCTCTAAGGGAAATGGTAGCTGACAACACGGATTGGTTTGTCAGTGACCAACCAAATGACTAATTCCGAAAAATGCAGAAATCAAATCAGTTAATGCGAGAGGGGAGAAAGCGCGAGACAGATGATATGCGCGCTCAGGAGCGGACGCTAAACATGAATGAGACTTTTAATAAAGCGCTTCAAAACAAAGACAGACCTGCTAATGTTTGTCAAATAAGAGCTTTTTATATTAATTACACAGCATGCTGAATTGTAGTACATTTGTTGCAGCTTAGTTTATAACAATGATCAACTGATGTTTACCAAACAAACCTTATGAGGTGGATGAAATGGCACAAATTTGTGAATCATTAAGACTTTCATGATAATCTTTTACAATCTTAAACGTGTATGTGCATCTAAAACCATCAAAGTCAGTGGGTAATATAACATTAAGTTCATAATGTTAAGCACTTTCTTCAAGGAAACATTTAGGCTCAAATACAC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa44686

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000003493	Essential Splice Site	331	399	7	8
ENSDART00000135973	Essential Splice Site	268	336	7	8

Genomic Location (Zv9):

Chromosome 8 (position 25875611)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	8	25003529
GRCz11	8	25022668

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGCTCGGGCAAAACTGGAGGCAGAGGGAAAAATCCCTAAAGAGCGAAAGG[T/C]GAGTCTTACATCTTACATCTTCCGAATGCTGTCATATGCGCATCTTGAAA

Long Flanking Sequence:

TTTAGTTGTACCACTTTTTCGTGTGAACCCAGCCGTGTTGGCCAATCAGAAAGGAGAAAACAGCGAGCACACTGACGTCATGAGGCAAAAGTTCCTGTTGTAGTGTCCACGCCAACACAAAGTTTTGGAAAATCTTCACCCAGGTCGGAGTTTTCAGAAAGTTTCGGTTTCAGTCACGCGTTGCACAATTTTCGTGTGGTCAAGCAGCAAAACTGCATAGAAAAAAATGTTGTGTGATTTTTGAATACATGTGGACAGGGCCACATTTTGTGTTGCATTTCGACTGTATTAACACCATGTTCCCCTTCTTTCCCTTTCAACTTAGATGGTACCAGGCAGTGGTGCAGTGCCAGCCATCCAGCGAATCCCTCTGCCAGGTGCTGAAATGCTTGAAGAGGAGCCGCTGTATGTTAATGCCAAGCAATATCATCGCATCCTAAAGAGGCGCCAAGCTCGGGCAAAACTGGAGGCAGAGGGAAAAATCCCTAAAGAGCGAAAGG[T/C]GAGTCTTACATCTTACATCTTCCGAATGCTGTCATATGCGCATCTTGAAATAAATGATCCAGACTGACCCCACACTCCATCCTACAGAAATACCTTCATGAGTCACGACACAAACATGCCATGCAGAGGAAGCGCGGCGATGGGGGCCGGTTCTTCTCCCCGAAAGAGAAGGAAGAAATGGCCTTGGCGATGCAGGTGAGAGCGCAGGCCCGTATCAAGCAGGAAGACTTCCACAATGCCACCGAATTGGCAAATGCACATTGGCTGCCCGAACACACACCGTCCCTTGCATAAGACACTCATTGAACTCCTTAGCAGATCATTCTCATTCCTCCTCTGGTGTGACATGCTGTTCTTGGCTGCTCTTGCACGAATCACTTCCCGATTCTCTCCCTGTGCTCGTTGGCTGCTTGAGTCTGTCCCATCATGTCTCATTGCTACAACAGACTGCATGATCTGCATAATCTGCTTTTTCATGGCCTGTCTGTCTGAGTGTGGAT

Associated Phenotype:

Not determined