Busch Lab

ZMP

ENSDARG00000077245

Ensembl ID:
ENSDARG00000077245
Human Orthologue:
COL21A1
Human Description:
collagen, type XXI, alpha 1 [Source:HGNC Symbol;Acc:17025]

Alleles

There are 8 alleles of this gene:

Allele Name Consequence Status Availability
sa24424 Essential Splice Site Available for shipment Available now
sa15530 Nonsense Available for shipment Available now
sa16013 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa24424
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000066866 Essential Splice Site 27 957 1 29
Genomic Location (Zv9):
Chromosome 24 (position 547758)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 487730
GRCz11 24 217389
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATTATCCTGGTGTTTTCACACGCTGCCAAGGACGATGATGTTCGAGCAG[G/A]TATGATCAGATTCTGATAATGGCTCAGTGGTTAGCACTGTGTTTCTGTGT
Long Flanking Sequence:
GCTTACACTTTATACAGGAATGAAAACATTTGGGTCAAATCACAACACTGTGTGATGTAAATATGAGCTGGCTTCATGAAAATGACCTTTCATTTAAGTCTACTATTATTATGATTCTTTTAAACTGAAATATATAAAGTATATAGCTTTTAAATACACTTAATATTGCACTTAATTATGTTTTAGTATATTTGGCTTATGCTGCTTTCACATATACAGTACTTATCTTCCACATAATATTATATTCTCCCCTGGTTTCAGAGGTGAAGAGTATAAATATGCTCTAAATAATTTGGCTTATTTCATTATCGTTTCTGCAAAATGCACTAACTAATGAGACTAACTCATGTTAATGTTCTGCTTCAGCAGGGCTCTGAGGATTGGTGTTGAATGTGAACGGCTGGATCTTCAGTTGGGAATGTCGTGGGTTTGGAAATGTGTCCCAGCACTGATTATCCTGGTGTTTTCACACGCTGCCAAGGACGATGATGTTCGAGCAG[G/A]TATGATCAGATTCTGATAATGGCTCAGTGGTTAGCACTGTGTTTCTGTGTGGAGTTTGCATGTTCTCCCCGTGTTGGTGTGGGTTTCCTCCGGGTGCTCCGGTTTCCCCCACAGTCCAAACACATGCACTATAGGGGAATTGGCTGTAGTGTATGAGTGTGTGTGTGTATGGGTGTTTCCCAGTGTTAGAAGGACACCCGCTGCCTTAAACATATGGTGGAATAGTTGGCGGTTCATCATGTCTTGTGTTGACTCTACAGGCTGCAGCACTGCGGTTAATGATCTGGTCTACATCATGGACGGCTCCTGGAGCGTCGGCGACGTGGACTTCGAAACTGCCAAACGCTGGCTAATCAATGTCACCAGCGGTTTCGATGTCAGCTCGCACTATTCTCAAGTGGGCGTCGTTCAATACAGCGACACCCCCAGACTGGAGATCCCCTTGGGTCAACACAAAACAACCCAACAGCTGATTGAAGCCATCGAGAAGATCAGCTATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15530
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000066866 Nonsense 256 957 3 29
Genomic Location (Zv9):
Chromosome 24 (position 550584)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 490556
GRCz11 24 220215
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CATCAGAAAGCCAARAAGATCCAGGGCTCACTGGTGTCAGAGGGGGCGTA[T/A]CTRCTGGAYAAGACCACYGACATCACTGAAAACACAAGGTCAGGGNNNNT
Long Flanking Sequence:
ATTTTGAACATTTAAAGAATAAAAAACAATAAAATAAACTAGATTAAATAAGAAAGAAAAGATTTCATTACATCATTTTACACAGTTGAGTTTGTATGCTTTTACTCGCTGCTGGATTGTGCACGATCGTCATATTTAGTGCTGTCAGATCTCTTATTGATTGAAATAAAATGTGGAGCAGGATTAAAAAGCTGGTTGGGAAGTGCATGATGCAACCCTGCAGAATCTGTGTGTGGGAAAGCATCTGAAATGATGAACCTGTGAAACGTGTTATGCAGAGTGTGTGTGTGGTGTGAAATGAGTGTGTTAAATATGTACTGCAGAGTGTGTGTGTTACTGCGTCTTTAATGAGTGTGTTAAATGTGTCCTGCAGAATCGGTGTGTCCGACACGCATCCCTGTGGCGTCCCGGGACGAGAAAGGTTTCGAACTGATTCTGGGCATGAAGATCCATCAGAAAGCCAAGAAGATCCAGGGCTCACTGGTGTCAGAGGGGGCGTA[T/A]CTGCTGGACAAGACCACCGACATCACTGAAAACACAAGGTCAGGGTTTATTTATTATGTACACTGTAAATAACTGCTGTAAAATGTACATATGACTGCACTGTACAGGAATGAGTACAGTAGTTTCCTCAGGGTGTGTGTTCTGATCAATGTGTGTGTTCTGGCTGATGTGTTTATTGTTTTTCAGGGACATTTTTCCGGAAGGTCTTCCTCCGTCGTATGTGTTTGTGTCGACACTTCGTCTGAAAGGCTCTTCGAGTACGGAGAGTTTTGACCTGTGGAGGGTGAAGTCTAAAGATGGGCAGATCCAGGCGGCGGTCACGCTCAGCGGACTGCAGAAATACATCAGCTTCACCACCACTAACACCTTTAATCAGGAGCAGACCGTCGTTTTTGATGCGCCAGGCATTGAGGTGAGCGAATCTACCTGAGTGTTATTCTGTAGAGCTGCGTCTGAGGCAGCAGTGTGAACTCTTTACTTCACTACAGAACTGAAGGACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16013
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000066866 Essential Splice Site 657 957 19 29
Genomic Location (Zv9):
Chromosome 24 (position 573994)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 513966
GRCz11 24 243625
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CGCAGGGGCCTTCAGGGACCCCTGGAGCAGACGGAGCYCGCGGCCCCAAG[G/T]TGAGAATCCTCCARAGACGCGCTAATTTTTAATKATTAATTATTCTTATT
Long Flanking Sequence:
TGACCGACAAAGCTTCAGTATTTTGGGCTGTAATGTGAGTGTTTAACAGTTTTTGGTGTGTTGGAGAATTGAGACCAAATAATTAAATTATTGAGGAAACATTTCTAGAGTTCATAAAAAAGTCAATACAGTAATTAAACTAGCGCATTAGACATATTTCTGTACACCTTTCCATTAGGTGTTGTTGCATTACATTATTACAATGAATATTCATCTTTTTCATTTGTTATCTAGCTAAAATAAACACCTTACACATAATAAAATAGATGGTTATGGTTTGAATGTTAATGTTGTAGGTGTTATTATTCATTTGAATCATTATATATATATATTACACACACCACACCACCACTGCCAAGTAGACATCAAATTGTGAAGTAATATAGGAAGATTTGTTGTGTGTGTGTGTTTACTCTTATCAGCTGTTGTGTGTTTGTGTCCTGCAGGGGGCGCAGGGGCCTTCAGGGACCCCTGGAGCAGACGGAGCTCGCGGCCCCAAG[G/T]TGAGAATCCTCCAGAGACGCGCTAATTTTTAATTATTAATTATTCTTATTATTAATTAGACAGATCACATGTGCTGTTCCTGGAGCAGTGCTCATCAGAGGAGTGTGTTCACTTAACTGTGCTCACTATTGCACTCTTCATTTAGACAGAGATTGATTGTGTCTGTAGTCAATAATAGAGATGTTATGTGTGGCTTGAGGATTTATGTGCACTAAAATATCAAGAAAAAAGGTTAAATAACATGAAGGGAATTAATTCATCAGTTAATCTGGATTTATTATCAGGTATGGGGTTTAGTTAACTGTTCATATGTGAGTCTGCACCACGAAACTCTGACTTCAGTGTTTAGCAATGAAATCAAATCAAATGTAGACAGTTGAAGTCAAAATGATAAGCCCTACTGTCAACTCTGGGATTAAGAATGGAGTTTTAAATGTGTGTGTGTGTGTTCTGCATATGTGTGTTTGTGTATAAATTTATATATACGTGTGTGTGTGTGT
Associated Phenotype:
Not determined