Busch Lab

ZMP

rbfox1

Ensembl ID:
ENSDARG00000014746
ZFIN ID:
ZDB-GENE-040927-11
Description:
Fox-1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q642J5]
Human Orthologue:
RBFOX1
Human Description:
RNA binding protein, fox-1 homolog (C. elegans) 1 [Source:HGNC Symbol;Acc:18222]
Mouse Orthologue:
Rbfox1
Mouse Description:
RNA binding protein, fox-1 homolog (C. elegans) 1 Gene [Source:MGI Symbol;Acc:MGI:1926224]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa15940 Essential Splice Site Available for shipment Available now
sa15281 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa15940
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122037 Essential Splice Site 12 373 2 12

The following transcripts of ENSDARG00000014746 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 3 (position 28219448)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 27937487
GRCz11 3 28068329
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TAAAACTAYCCAGGCAGTCATTTGACCATTTTTGAAATGTTGTTTTTTTNC[A/T]GGGTAAWCAAGACGCCCCAGCACCCCCAGAAACCATGGCCCAGCCTTTCC
Long Flanking Sequence:
AGCACAAATATTCAGCACTATTATCCCCAAAGTAGTTTGACTTCTTGATGTTAGACTAGGGACTGAAGTAAGTAGCATGTATATTGTGACAATTTTGGTAAAATATAGGAGAAGAAGAAAACCATGCATCAAGCAAAGTACTCCAAAAAAGAGAATAATTTATTGTATAAAAAATCAAAAATAAACAGAAAATAGCAAATAACGAGGAATAAAATAGATATATATAGATATCTGCTTTTTTTTAAAAACTATGTACGTGATGTCATTGAGAAGGCAGAGCTAGTAAATAACGTCTGGAAATAAACAATGAACATTGAATCTAAGGGACTGATCCAGGCGCAAAAAAAAAAGAAATATGCTAGGTATTCTAAACAAAATATCTGCTGTATAATAGCACAAATGTTTAACGCTATTGTCTTTAACGTATTATCAATTGAAACATATAACATTTAAAACTACCCAGGCAGTCATTTGACCATTTTTGAAATGTTGTTTTTTTC[A/T]GGGTAATCAAGACGCCCCAGCACCCCCAGAAACCATGGCCCAGCCTTTCCCATCGGCCCAGTTCGCTCCCCCTCAGAACGGCATTCCTGCTGAGTACACGCCGTCCCACCCTCACCCGACCCCAGACTACTCGGGCCAGACCCCGGTGGCAGAGCACACGCTGAACTTGTACACCCCTGCCCAAACGCACAGTGAGCCCAGCGGACCAGACAACAGCATACAGGCGGTCTCCGGCACAGCCACAGTAAGCAGCGCTCGCTCACTTCATCTATATCTGACTCTCTTCTTGATGGCATTTGCTCGTCATGGTTCAGCCTTTTTTTTTTTCGGATTGTGTTGTGGATTGAGCTGCCCTCCGTGATCTGCCCTCCAAGGACATCAGTGCTGTAGCTCGCCCTTAATATTTCATATGTTTCAGGGCATTTCCATGAATAATTGACCAGCTTTGTGTTATTTCACCAGCTCGGGGTACAAAGTGCTCTCGCTGAGTTTAGTTTGGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15281
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122037 Essential Splice Site 210 373 6 12

The following transcripts of ENSDARG00000014746 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 3 (position 28193032)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 27911071
GRCz11 3 28041913
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACAGCACGGGTAATGACGAATAAAAAGACAGTCAACCCATATGCAAATGG[T/A]AAGAACAAGCTCCCTTGATGTTGTCGAATGCATAMGAGTATAGATTGAGG
Long Flanking Sequence:
ACCTCAAATCTGAAAGTTTAGTGTATGTTGCGCTATGCCAAGCGTTGTTTTCTTTCGTTCTTTCCATTCTTCCATTCTCTTGTCGTTCTTTTAACCCAGTCGATCCCTCTCCACTGCATGCTGTCTCATATTCGATGCCTTTCGTTTGTTGAGTGCATTTTGTGTGTTTCTGTAATTTCTTATTTCTTCATGTACTTCTTCAACTTGATTCATTTTGATGACGCATGCAGATGAGTCTTTTTATGATGAGACTTTTGCGTATGTTTTCTTTGCTTTATGTGTCTTACCACTTTTCTTTAAGTAACTGTTTGTTATGATGTGTAATCATTTTGAAATTCTTCACCGTAATGCATGTCAGATTTGTTACCACAATATTTTCAATATTTACAGCTTTAGCTTCAGTATGTGTCTTGCTCACATGGCTCTGTTTGTGCTCAGGTTAACAATGCAACAGCACGGGTAATGACGAATAAAAAGACAGTCAACCCATATGCAAATGG[T/A]AAGAACAAGCTCCCTTGATGTTGTCGAATGCATAAGAGTATAGATTGAGGGACTGGGTGCAGACCTGGTGCAGTGCAATCTGAGCTGCATCCAATGCTTTTTAATGTGCTCACATAACCCCACCCCTCACAGTGACATCTCTACCTTCATTGAGTTCATTGTGTCTGACACTGCATCAGATATGTAGTCTCAGCTTGCATCATCAAGGCTGCTTCCAGATGCTATTGTTTAGATTTGGATAGAATATTAATATTGAAGTCATTGTTTACCCAATATTTTATATGTTTACTCACTAATTGCTCACTTTTTATGAGTTAAACACAAAAGTGGAAATTCTGAAAAATTATTAGACATTGACTTCCATTGTATGGAAGAAGTACGATGGAAATCAATTGCCTCTGATTTCCAGTACTTTTTAAAATAGCTTATTTTGTGTTCAGCAGAAGAAAGAAATTCAAATATATTTGGAAGAAGAAAAAGTGAGTAAAATATGACAGAAT
Associated Phenotype:
Not determined