ZMP

trim3b

Ensembl ID:

ENSDARG00000005397

ZFIN ID:

ZDB-GENE-070112-1132

Description:

tripartite motif-containing 3b [Source:RefSeq peptide;Acc:NP_001073637]

Human Orthologue:

TRIM3

Human Description:

tripartite motif-containing 3 [Source:HGNC Symbol;Acc:10064]

Mouse Orthologue:

Trim3

Mouse Description:

tripartite motif-containing 3 Gene [Source:MGI Symbol;Acc:MGI:1860040]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa6173	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa15924	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa6173

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000008134	Essential Splice Site	45	748	2	12
ENSDART00000109183	Essential Splice Site	49	772	1	12
ENSDART00000136472	Essential Splice Site	49	752	2	12

The following transcripts of ENSDARG00000005397 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 10 (position 26790145)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	10	26194002
GRCz11	10	26155715

KASP Assay ID:

554-4398.1 (used for ordering genotyping assays)

KASP Sequence:

CACTACCACAATCCCAAAGTCCTGCCCTGCCTGCACACCTTCTGCGAAAG[G/T]TCTGTATCTGTTGCCACTTTGATTGATAATTAAARAGGGAAKGAGGAATT

Long Flanking Sequence:

ATGAAAACACTGATGCATAGTTTGATCTCTGTAGAACTTGGAGCAATCCTCCGGTCCAGCTTTGTCTTATTAATAGTTTTTTTTGTGTATAGATGTCTGTGACATTAGTTTTCACTGTGCTGATGGTTTATTTGCATCCTATTTGTTGTTCTGTTAGCGTAAGTAAATTTTTTTTTTGCAGTAATCTCACAGTTTGAATTTTGTCTGGTTCAATTCACCACTGTCATTTTACTCTTCCAACCCAAATCTTACTTGCCGCTGGTGTGTTTTTTTTATCAAATAAATGTTTTTGTTAACTCATCATTTTGTTCTTTTTAGGTTAAGGTTTGTCCTGGCCCTCGGCCACGTCTTTGGATGTCTGTCACAATGGCAAAGTTTGAGACCGGCCGCACAAGCCCAGTGGTCCGTCAGATAGACAAGCAGTTCCTGGTGTGCAGTATCTGTCTGGACCACTACCACAATCCCAAAGTCCTGCCCTGCCTGCACACCTTCTGCGAAAG[G/T]TCTGTATCTGTTGCCACTTTGATTGATAATTAAAGAGGGAATGAGGAATTATAGGAAGAAGATTCAGTAATGAGTCTCAATTGAACTCGTATACTTAGTGGCATTAAGCCTATTAAAATGAGTAATAAGGATCTTGTAATAGCGCCCTCAGTAATTGAAGCATGAATCGGCAGTTATCCTTTTTATAAGATGGCATATGAACTTTGAATACTTGCTTCTGACAGAATTTGGCACGGATGGGGACTCTGCACCTAGAACAGTTTTGACATGAGATGTGCGCAGTTTGACAATGAGACTCTCTCTGTTTGTTTTGGGCTTTGTATGTCAGTGGATGCTTTCCACTGTGATTGTCCGTGTTGTGACTGAAATTTCAGCAGCATTTGCCCTTCTTTTACTTTTGCTGTGTCTAACAGGAGGATCTAATTTATGAAATGAGACCTACTACTATAAGGATGTTTGGATTTGGTCTAAAAACAAAAAAGAAATTAAAACATTTTAAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa15924

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000008134	Nonsense	263	748	6	12
ENSDART00000109183	Nonsense	267	772	5	12
ENSDART00000136472	Nonsense	267	752	6	12

The following transcripts of ENSDARG00000005397 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 10 (position 26778734)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	10	26182591
GRCz11	10	26144304

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GCAGGGAAARGAGCACATCCAGAGCAGCTGCAGTTTCACCGAACAGGCAT[T/A]GAGCCACGGCAGCGCTACTGAAGTCCTGCTGGTYCAGAAGCAGATGAGYG

Long Flanking Sequence:

AATATCTGTGGGTATAAGTTATAAGTGCAATTATAGAAGACTATAATATTTACAGATGGATGTACTATGAGCATAACATACAAGTCATATTAACAAGAATCATTGGTTTACAAATAGATGAACATACTGTACAGGTTGCCATTAATGATCAGGGATATGCAATTCAGTATGAACATAATATACATGTTGTTATTTGCTATAAACAGGAATTACAAATAGACATGTAGATATGTATATCATACATTTACGAATGTATAAGTGCTGTGGATATGTGCACTTACAAACTCTTTGAACTATACATGAAGATGATTTTGTTGAAAATTAGTCTTAAAAAAACGGTCTGAAAATGTGATTAATTTTTCAAGATAACTAATATGAAAGAAAAAGAAAAGGAAATTATCTTCTACCCTGTCTTCCGCAGGTTCTTCAGGCGCAGTTATCGTCACTCCTGCAGGGAAAGGAGCACATCCAGAGCAGCTGCAGTTTCACCGAACAGGCAT[T/A]GAGCCACGGCAGCGCTACTGAAGTCCTGCTGGTCCAGAAGCAGATGAGCGAGCGGGTGAGTGCTCTCGCCTGCCATGACTTCCCAGAACGCCCACATGAAAATGCCCACCTGGACTGCCAGATTGAGACTGAGGGCCTGCGACGCTCCATACAGAACCTGGGCGTCCTGCTGACAACGGGGGCTGTGGGACATACGAGCGTGGCCACCGGAGAGGGACTCAGACACGCTCTGGTCGGCCAGCATGTGACTGTGACCGTCACCACTAAAGATAAAGACAGCGAGCTCGTCAGGACGGGTAATGCGGCTCTCCGAGCAGAGATCATGGGGCAGGATGGAGCGCAAGTGACTGAGGCGGAGGTGGTGGATAATAAGAACGGGACGTACGAGGTTGGTTATACACTGAAGGGTGAAGGCGAGTACTTGTTCTCTCTGATACTGTATGGACAGCCGGTGAGGGGCAGCCCGTTCAAATTAAGGGCCATAAAGCCATCGGATGTGC

Associated Phenotype:

Not determined