ZMP

tnfrsf1a

Ensembl ID:

ENSDARG00000018569

ZFIN ID:

ZDB-GENE-040426-2252

Description:

tumor necrosis factor receptor superfamily member 1A [Source:RefSeq peptide;Acc:NP_998355]

Human Orthologue:

TNFRSF1A

Human Description:

tumor necrosis factor receptor superfamily, member 1A [Source:HGNC Symbol;Acc:11916]

Mouse Orthologue:

Tnfrsf1a

Mouse Description:

tumor necrosis factor receptor superfamily, member 1a Gene [Source:MGI Symbol;Acc:MGI:1314884]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa8496	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa15813	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa8496

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > G

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000002493	Essential Splice Site	53	389	3	10

Genomic Location (Zv9):

Chromosome 16 (position 19132987)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	17163310
GRCz11	16	17071287

KASP Assay ID:

2260-9465.1 (used for ordering genotyping assays)

KASP Sequence:

AATGAATACTGGAATAAGGAAGGATTCWGCTGTGATAAATGCCATCAAGG[T/G]AAAGAAAATTAATTCAGTCCTTTATGAAACTGAACTTTCAGTTGGCATTT

Long Flanking Sequence:

GCAAGTTATTACTTAAAATACTTCCGTGAGTATTTAATCTTCTTGTATGGCTTCAACATTGACTGACATCACGAGGTGTTTTGATTGGCTGATAACATAATTCTCTAAAACTTTTACCACACAGACAAAAAATATATAACAAAGGTAACATTAGACATTTAAAATTTATATAAAGTTTTAAAGTAGATCAAAACTTTACATTAATATATGATGTAAGGAATGACTTCTCAGAATGTTTGTATATTGTCAAGTAAATAGAGATAAAGTAGCTATTGTACAGACAGGGCACAGCATACATTCCAATTGTATTCTATTCAAAGCATAGCCACTGTGACTTTTCTTGTAATTTTAGCCAAATTCAATTTCTGTTCCCCACAGGTTCTAACCAGCCAGTTATATACAATATCAGGACTTGGTGGAAACAAGACTATGAAGGGAAATTGTCTTGAAAATGAATACTGGAATAAGGAAGGATTCTGCTGTGATAAATGCCATCAAGG[T/G]AAAGAAAATTAATTCAGTCCTTTATGAAACTGAACTTTCAGTTGGCATTTTGGTGTTGAGTTCAGATGTTCTCCCCATGTTTCCTCCGCATGCTCCGGTTTCCCCCCACAGTCAAAAGACATGCGATAATGGCCGAAGTGTATGTTTGAATGAGTGCGTATGAATTTCCCAGTACTGGGTTGCAGCTGCATGGGCATCCATTGCGTAAAATATATGCTAGTTTGGTGGTTCATTCCGCTGTGGCGATCACTGATAATCAGAGACTTAGCTGAAGGAAAATGAATGAATGAGACTGAATTTTTGGTTAGAATGTTTAATAAAAGCCAAAACACTGTTGACATTTATCCCTTATCCAGAAAGAACAGTGTGCGTTTTCCAAAGAAATGTTTTGTTCAGCTTTCTGCCTCTTTCTCTTCCTTTCTACAATTCATTTTTAGGGTATAAGTTAAAACAGGAATGCAGTGCAGAAAACATGAGGTCAAAATGTGAGAAATGTGATG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa15813

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

A > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000002493	Essential Splice Site	201	389	8	10

Genomic Location (Zv9):

Chromosome 16 (position 19128559)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	17158882
GRCz11	16	17066859

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TAMTGCTGAGGTCTATTTAATGTTGCTTAAACTCTTCRWGTTAAWGTTTC[A/T]GACACGGTACCTAAAATAGTAGTTCCTGTTTGTGCAAGTATCATGGTTCT

Long Flanking Sequence:

TATTCACTACTGGACATGGTGAACAAAATAATGAACATATTTAATAATGTGTTTTTAATTCCCTATAGATGTCAGCCAGGATGTGATCACCTATGCAAAACCAGCATTCCCCCAGTCTTTTTTACATCTACTAAGTCAAATAGTCCTGAAGGTGAGTACTGTGTACCCAACAACATCCATTAGCATGAGATCTATCCCACATTTGGGTCTATCACAGGTGAACCAAAAAGCAGTCAGTTGTAGATGTCAGTTTTCTTTTTTTCTTGTTTTGGATGCCAGACAGATGACTCCTTTTCTTCTCAAGTTTTGTCGAATTGAACTATTACTAAAATCAAAAACATGAGTCATTTGGAAAGTCCCTCTAGCGTTTATATTCTGTTGAATTTGCCTTGCCATGACTAAGCAAGTCTCTCTTTGGGTTAAAAACAACATGTGTCTTCAGGCAAGAGATAATGCTGAGGTCTATTTAATGTTGCTTAAACTCTTCGTGTTAATGTTTC[A/T]GACACGGTACCTAAAATAGTAGTTCCTGTTTGTGCAAGTATCATGGTTCTATCGTTAGCCATTTTTATGGCATACGAAGGCATCAGACATTGGCGGAAGAGGGCACAAGCTTCGTCATCTCAGTCATCGTCACCTGCTACAGAAGAAGAGGTAAAAGGCTTACCATTTGACAAATGCTGACAAAGAACTCGCATTTTCTTCTTAGTGTGAATGATTCACATCTGATGCTAAACGCATAATTGCTGTAATGATGTTTTCACAGAAGATGATTCACTTTAATGATAAATACTAATTTATATGCTATTGCGTTATTAGCAAATCCAAGGACCCCTAATTTAAAAAAAAAAGAAAAGACAATTATAATATCATAAGAGCTAAACTATTCTGCATGTATAAAAACTGCCATCGTAATTCTCAAATTGTTTTCGTAATTATCACCAAAACTGTATTATCTACACCAGGCATGTCCAAACTTGGTCGTGGAGGGCCGGTGTCCTGCT

Associated Phenotype:

Not determined