Busch Lab

ZMP

NR_023338.1

Ensembl ID:
ENSDARG00000079688
Description:
wu:fc10d10 (wu:fc10d10), non-coding RNA [Source:RefSeq DNA;Acc:NR_023338]
Human Orthologue:
TNRC6A
Human Description:
trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:11969]
Mouse Orthologue:
Tnrc6a
Mouse Description:
trinucleotide repeat containing 6a Gene [Source:MGI Symbol;Acc:MGI:2385292]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa1142 Nonsense Available for shipment Available now
sa20074 Nonsense Available for shipment Available now
sa15745 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa1142
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113219 Nonsense 146 1707 2 18
Genomic Location (Zv9):
Chromosome 3 (position 35599354)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 35384550
GRCz11 3 35514058
KASP Assay ID:
554-1053.1 (used for ordering genotyping assays)
KASP Sequence:
TGCTAAGCACATGTCAAGGCTCCGGGGAGGGCCCCAGCGGCAAGCTGGCA[G/T]AAAGCAGCCATGGCAAAATAAATGCATGGGGTACCCAAGGTTCCTCAACC
Long Flanking Sequence:
AATTAAGCATATGTTGAAAGGTGTATTAATTTCAACAATCAGATTATTAGTTAACCATATAAACAATATTTATTTGTCATCTAAACTGTTCACTTTATTTTGTGTTTGCAGGTTTGAAACACGCTGGTCTGGAACCTCAGTATGAGAATTCACCTTGGAGCACTGGCTCACCTTGCAGCGACTCGAACAGCAACTGGGGAAAAGTCATAATAGATAAGGGACCCTGGCCCTCTATCACTGGAAGTGACCCAGAGTTAGCCTCGGAATGTATGGATGCTGACTCTGCTTCCAGCTCTGGGTCCGAAAAGAATCTCAGTATGATGCCGTCTGGGAGCTCTGGTGGTGACAGCAATGGCAATAGACAAGGTTCTCATTTCATGGTTGCAAATGGCAGCAATAATGTGGGTAATGGGAGTGTTAAGGGGCCTTGGGGTGTACCCAACGGCTCAATGCTAAGCACATGTCAAGGCTCCGGGGAGGGCCCCAGCGGCAAGCTGGCA[G/T]AAAGCAGCCATGGCAAAATAAATGCATGGGGTACCCAAGGTTCCTCAACCAATGTAGGTATAAATCCAAGCACTTTGAACCCAAATGCCAACCATGGTGCCTGGCCCGTTCTTCAGAACACTGGGCCCAACCCCCATGGGCCTGTGGGGAATGGAAATGGTGGCACCAACACTCAACAAAGCACCATAGGTCAAACACCCAGCATGCAGAGTATTAACTCTAAGATGTCCTGGGGATGCCTGCAAGAAAATATGTCTGAAGCTGAAGTCAATGGTACAAACAAGGTTCCAAGTGGGCAGCCTCAAAACCTTAACACTGAATTTAATGGACCAAATAACACTACTAACACGATGACCTCTAGTTTACCAAACTCTACAGGTTCAATGCAGATGAATGAACAGCCCCCAGGGCACCGAGCTTGGCCTATGAGTACTGGGGGCTCCCCTCAGCTCCCTATTTCTCCAGTCTCTAATGGCACTTCCATTTCTCAACATGGCAAC
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa20074
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113219 Nonsense 437 1707 2 18
Genomic Location (Zv9):
Chromosome 3 (position 35600229)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 35385425
GRCz11 3 35514933
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTTCCTCATCCTCTTCAAACACTGGCACTAAGGTCTCAAACGGGGAGTG[G/A]AACACTTTGCCCAGCAACAGTCAGCATTCCAATGATAGCACGAACGGGAG
Long Flanking Sequence:
ACAGGTTCAATGCAGATGAATGAACAGCCCCCAGGGCACCGAGCTTGGCCTATGAGTACTGGGGGCTCCCCTCAGCTCCCTATTTCTCCAGTCTCTAATGGCACTTCCATTTCTCAACATGGCAACAGTGAGGGAATCAACAGCGGGTCTTATGGTACAGCATGGGGCGTTCCGCCCAGCACTAATTACTCTGGAGACAAATGTCCCGTCCCTAAAGGCCAAGCTGTGGGCGACACTGTGAATGCAACTCTAATGCAGTCTGGAGCTAATGGCTCCTCTGTGAGTGCTGCTTCTTTAAAGAATAATAATAATAACGGGATGAGTGGCCGTGGAGGAGGCTGGGACTCAGTGCCCGCTACCTCACAAAGTATGTCTTGGGGAGCAGGTAGTGCCGTTGGCCCAGCTGGGATCCCTCGCCCCTGGGGGAGTGCCTCCTCCTCCTCGTCTTCCTCTTCCTCATCCTCTTCAAACACTGGCACTAAGGTCTCAAACGGGGAGTG[G/A]AACACTTTGCCCAGCAACAGTCAGCATTCCAATGATAGCACGAACGGGAGCAGGAAGGGAACAAATGGATGGAAGTCCTTGGAGGATGATGCTCTTGGAATAGGGAGCTCTGGGCAAGTGTCCCAAGGCAGCACATGGAACAAATCTACAGGCAGTGAAGGAAGTGGAGGTAGTTCGGGAGGTCACAGTGAGAGGGATGGACAGCGTGGTGGAAACCGAAGGAGGGGTAATCAGCAGGGTATGATTAATGCTGCTCTCTCTAAAATTGATGTGGACCCCAGGGTGCTGTCCAACACAGGGTGGGGACAAACTCCAGTTCGCCAGAACACTGCCTGGGATGTTTCGAGCTCGGATAAAAAGGCAGGAAATGTACAGACAGGCTGGGGCAGTGCTCCTCCTCAGGCATCTAACTCAGGTGGGTGGGGAAATGGACCCAGCACCAACAAAAGTAGCGATTCTTCAATGTCTGGGTGGACTGAGCCGAAACCTTCTACTGGCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15745
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113219 Nonsense 1378 1707 13 18
Genomic Location (Zv9):
Chromosome 3 (position 35609060)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 35394256
GRCz11 3 35523764
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTTATGTTSATTTGGCAGAGTTCCGTCCTGGTGAGCCCTGGAAAGGATA[T/A]CCAAACATTGATCCTGAAACTGACCCATTTGTCACTCCTGGCAGTGTGAT
Long Flanking Sequence:
ACATGGTGTAAAATACTACATTTATTTTAATGGAACTCTAAATTTCATATAAGGGATAGTCATGCAAAAATGTTCTGTTCATTTATAACAATATCAAGCAAACATTTTTTTGAGAGCACCCTATCAAACAATGGTGAAGTTTTCAAAGTCTAATGGATGCAATGTTACTATAGGTGCTATAACATCTGGCCTGAGGCTTGAAGACTCACCCTTTGGTCCATATGACTTCATCAATGCCAGTAATGCTCCCATTAGTCCTCCTGGCTCTGTGGGAGACGGCTGGCCCAGCCGTGCCAAATCACCTCATGGTTCCACCAATGTCAACTGGCCACCAGGTTCAGATTTATTTTCTTCTTAAATACTCTACTTGTTCCAACCTGCATTAAAATTAAGTCATTAACAAGAGGTTTGTCTGGCTCACCGCAGCTTTTATTGAGAATTTACTGACCATGTTATGTTCATTTGGCAGAGTTCCGTCCTGGTGAGCCCTGGAAAGGATA[T/A]CCAAACATTGATCCTGAAACTGACCCATTTGTCACTCCTGGCAGTGTGATTAATAATCTCTCCATTAATACAGTCCGGGATGTTGATCACCTCAGGGACAGGAACAATGGTAAGAGATATGTTCAAAAAAATCTAAGTCATATAAAACTCATTATTAAAATTATTTTAAATATATGCTGTTATTTTCAACTTTTTATTCATTTAAGAGTTCTAAAAATATTAAGTTATAATATAATTATTAACATAATTGAGGTCATTTTCCAGAACAAGTTGCAAATAATTGACTCGCCCTCCTGTCATGCATGATGTTCTGTCTTCAATCATAAAGAAATGTAGTTTTTTGAGGAAACTATTTCAGTTCTCCATATATTGGAGTTTATTGGGGCCCTTTATTTTGAATTTAAAATGCAGTTTAAATGCAGCTTCAGAAGGCTCTAAATGACCCCAGCAGAGGAAGAAGCATCTTACCTAGCAAAACAATCTGCCTTTTTTTGGGGGGG
Associated Phenotype:
Not determined