ZMP
C7U123_DANRE
Ensembl ID:
Description:
RPTP-rho [Source:UniProtKB/TrEMBL;Acc:C7U123]
Human Orthologue:
PTPRT
Human Description:
protein tyrosine phosphatase, receptor type, T [Source:HGNC Symbol;Acc:9682]
Mouse Orthologue:
Ptprt
Mouse Description:
protein tyrosine phosphatase, receptor type, T Gene [Source:MGI Symbol;Acc:MGI:1321152]
Alleles
There are 7 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa11104 | Nonsense | Available for shipment | Available now |
sa7050 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa15512 | Nonsense | Available for shipment | Available now |
sa31544 | Essential Splice Site | Available for shipment | Available now |
sa17989 | Nonsense | Available for shipment | Available now |
sa15571 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa11104
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000092493 | None | None | 237 | None | 9 |
ENSDART00000108571 | Nonsense | 378 | 1496 | 7 | 34 |
Genomic Location (Zv9):
Chromosome 6 (position 51228137)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 51277319 |
GRCz11 | 6 | 51277318 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTGGGGAGGGCGGCACTGGACCACCAGGACCACCGCTTATAACTCGCACC[A/T]AATGTGCTGGTAAGTGTCTATATACAGTACAGTACATACTTTGAGGAGGT
Long Flanking Sequence:
ATGAATGTGGATGTAAGAATGTGAATTTAAATGTATTCATTGACGGTCAAGTATTTATTGAAGTTCAAGATTGGAAGTTTCCGAATGAACCTGTTATTAGCGGTTGTTATCTCAAAATAGCATACCTTGGACTGACCAATCAGCTTTGAGTATTCCAGACATCCACGTAACAAGGATTGTTAATAATAATCATTCTCTTTTCATCTTCCTCTTCAGCACCCCCTACACCCATCGCCCCCCCTGAGCTTCTTGCAGTTGGCGCCACCTACTTGTGGATCAAACCGAACGCCAACTCCATCATCGGCGATGGCCCTATCATCCTGAAAGAGGTGGAGTATCGCACCACCACTGGAAACTGGGCCGAGACGCACGTCGTGGATGCACCAACTTACAAACTCTGGCATTTGGACCCAGATGTGGAGTATGAGATTAAAGTTCTTCTCACCCGACCTGGGGAGGGCGGCACTGGACCACCAGGACCACCGCTTATAACTCGCACC[A/T]AATGTGCTGGTAAGTGTCTATATACAGTACAGTACATACTTTGAGGAGGTTAAGAGTAATGGAATAGACCGGTTTTTAGACAGTTTAGCGGTAATTTACTTCTTTCTGATTGTTGCTCTTATACGTTTCTCTCATTCTTCAAATGGAGCTCAATTACTAGAGTAAAGTGGCCACTCTCTCTGATTGTTCCTTTGGCTTTTACAGCTAAAGATTGTAAGGTTTTCTTGCTGTAAAAGCTGAAAAGTGTGTTATTGGAGGTTAAATACTCTGATAGGGGGTTTATTTGTAGATATTAGCTGTGGTCGACTTTGAAGGAGAATCAAAGTTTAGTTTTAGTGGCCTAATTCACAACTGCAAGCTTCAAGAGATCATTACAGACTATTAAGTAGATTTGCGCTTATTCATTTGTATGTTTCGTGCTTTGATTATTGTGAGAATTAATTGAGTTAATTACTTTTTTATGTTGATTATAATAGTTATTTGAACATTACCAGAAGTAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa7050
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000092493 | None | None | 237 | None | 9 |
ENSDART00000108571 | Nonsense | 634 | 1496 | 12 | 34 |
Genomic Location (Zv9):
Chromosome 6 (position 51146546)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 51195728 |
GRCz11 | 6 | 51195727 |
KASP Assay ID:
554-4066.1 (used for ordering genotyping assays)
KASP Sequence:
CWAGTTCTTATCAAGTGGTGGTTCAGGAGGAGCGRAAGCAGAAAGTCCGG[C/T]GAGCCACTGATGTTCTGGAGTGTTTCCCTGTTCCCGTGAGCTTCAGAAAT
Long Flanking Sequence:
TCTAAAGTGACGTTGGTGAATTAGTAACGGCTTCTGCTGTTCTGACGTCAGCTGCAGATGTGAATGAATGGCGGAAGAAAGTAGCTCCTAATACAAAAGGGTTTTAGACTCTGTGTTTGATTTTCTTTTGATTTTCGTCGAACTGTTGTATAAACGCAATATCATACCAATGCAAGCCTCTCACTCGTGCTGATATACAGCCATAGCACACTGCTACTCGTGTGATATTGCTCAAATAAAACATATTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAACACACACGCATATACATTATTAATAAAAGTTTATTCTGGATGTGATTAATTGCGATTATTATTTGCCAAGCACTACTAGAAATAAACAGTAGTATCACTGCATTTGTAGTATTTAATTCTTATGGATTTTTTTCTCTAGTTCTTATCAAGTGGTGGTTCAGGAGGAGCGGAAGCAGAAAGTCCGG[C/T]GAGCCACTGATGTTCTGGAGTGTTTCCCTGTTCCCGTGAGCTTCAGAAATGCTTCAATCTTGGATTCTCCTCACTATTTCGCAGCTGAACTCCCTCCGGTTAGCCTTGCTGTAGTTCAGCCCTTTACTATAGGGGACAACAAGACTTATAATGGCTACTGGAATGCTCCACTGTCACCTGCCAAAAGCTACAGCATTTACTTTCAGGCCCTGAGCAAAGCCAACGGGGTGAGTACTTCATTTTGTCTTTATTTTGTTTCCAGTGCATTGTTCTTGATAATTGTTGATGCTTGAGTATTGATTAGTTGATCTACAGGAATTTGGCTGTGTTATATTTGATCTAAGAATCATACAGATTGAAACAATACATTTTATTTTAACATATACAGTTGAAGTCAGAATTATTAAACCCTCTGAATTTTAGGCTCCCTGTTTATTTTTCTCCCCAATTTCTGTTTAACGGAGAGGAGATTTTTTCAAAACATTTCTAAACGTAATAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15512
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000092493 | None | None | 237 | None | 9 |
ENSDART00000108571 | Nonsense | 831 | 1496 | 17 | 34 |
Genomic Location (Zv9):
Chromosome 6 (position 51084132)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 51133473 |
GRCz11 | 6 | 51131491 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GACCCGTAGGCACAGCGGATAAAAGCACAGGAAAAGTCAGCACATTACAC[A/T]AGGACGATCCGYTCTCCACCAGCAACCAGGACCTCAACGGATTCTGTGAG
Long Flanking Sequence:
TAACTTGCCTAATTACCCTAACCTGTCTAGTTAACCTAATTAACCTAGATAAGCCTTAAAATGTCTCTAAGCTGTAAAGAAGTGTCTTGAAAAATATTTAGTCAAATATTAAATGATTATGTTTAAAAAATGTGTTGAAGAAATCTTCTCTTTATTAAACAGAAATTGGGGGAAAAAATAAAAATTGTTGGAACTTTTAGAGAACTTTTAGAGTTCTATTAATTTGGGGCGTTAATGGTTCTGACTTCAACTATATATATATAAATATTTATATATATATATATATATATATACAGGAGCGAGTTTGCACTAGCCAAAAGCATTGCACCAACACACTGAAGATGTTGCTTTTGATCATGTTTATAAACTTGTCTTGCTGTGGCTGGGTTTGAAGGAAACTAGCTAAGAAACAGAAGGAGACAGCCAGCAGCAGCACGCAGAGAGAGATGGGACCCGTAGGCACAGCGGATAAAAGCACAGGAAAAGTCAGCACATTACAC[A/T]AGGACGATCCGTTCTCCACCAGCAACCAGGACCTCAACGGATTCTGTGAGTTCAGCAAATATTGTGCTGTGCCATTATTGTGCTGCATTGTGTTTGTTTTTTGTTAGTGTTTTTATCCTCTGATAATGCGGAAAGTTAACGTTAATGAAGCAAATGAGCGAATGAATTAACACAAAATAACAAATGCACAAGCAAATGAATGATTGAATTAAAGGTTTATGACAGCCTGGAGTACTTTTTTTTTTTTTTTTTTAGATTTTAACAGATTTGTGTGTGTTAAGCATCAGTTAAGAGATTAGCACCTGTCACCTTTAACCTCTTAAGGCCCAAGGTGTTTTTTTTTTACATGCATTTTTTATTTCTCTTTGCTATTTGGACTTATTGGAACCTAATTAAAATAAAACCTAAGTATCGTCTTTTGATATGATGTACTTTTAGAGAAAAATTATGTCCATATATGTGGAATCGTAGTAATTTACATAAAACACTTTTTCCTGACT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31544
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000092493 | None | None | 237 | None | 9 |
ENSDART00000108571 | Essential Splice Site | 1016 | 1496 | 23 | 34 |
Genomic Location (Zv9):
Chromosome 6 (position 51019106)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 51068584 |
GRCz11 | 6 | 51067803 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTGTTTCCCAGGGCTACCACAGACCAAGACACTACATAGCAACGCAAG[G/A]TAATTAACAAAATACATCATCTAAGAGACGTGAACATGGTCTACACATTT
Long Flanking Sequence:
GCTCATGACTGCTCCAAAGAAAGTGCTTCCCCGGCTGCTTCGAAATCCGCTAACTTGATCTAAACACCATAATGACACAGTCGATATGATTGTGATCATTGCGAAATGGAGAGTAAACATGTGCGGATATGCTTCTCTGGCCCACAGCGGCTATAATCAGGCCACCCAATCTCAGTCCTGATAATAAAACAATTACGGTCTCCGTCGTACCACAGAATCGGTCGTAAACCACAGCGGCGCTTTCAGAGCTTGACAGGAGCAAGGCTACATTGGTCACCAATTTGTTTCGCAGTGGTTAAAATGCTAATGAAGCCATGGAGTCAGAAAGGTTTAATTACGATGTCTCATTGAGGGCTGAATTAGATTCAAACAAAGTGTGTTTTAAGTGCACTGGATAGTGCAGGTATAAAAATGTGTTTCATTTGAATAATTTCCACCTTTCTTTTTTTATTTTGTTTCCCAGGGCTACCACAGACCAAGACACTACATAGCAACGCAAG[G/A]TAATTAACAAAATACATCATCTAAGAGACGTGAACATGGTCTACACATTTATCTTGCAAGTGTAATTAATTAGAATGTACTAGCTTTTATATGCTAAAGGTAGCAACTATACCAGTGTTGTGGTATCATGCACACTTCATATATTTACAATTTCATATTACTAACTTTTTTTTAAGGTATTAATAAACAAACCTAATCAACAAAACTAAGAGACGTAAACACAGTCTACAGGTCTATCTTGCAAGTGTAATTAATTAGAATGTACTTGCTTTTATATGCTAAAGGCAGCAACTATACTAGTGTTGTGGTATCATGCACACTTGATATATTTACAATTTCATATTACTAACTTTTTTCTAAGGTAATTAATGAACAAACAACAAAACTAGAAGATGTAAACAACCTGTCTTGCAAGTGTAATTAATTAGAATGTACTAGCTTTTAAATGCTAAATGTAGCAACTGTAGTAATGTTTTGCAGCAACATGTACACTTTATAGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17989
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000092493 | None | None | 237 | None | 9 |
ENSDART00000108571 | Nonsense | 1027 | 1496 | 24 | 34 |
Genomic Location (Zv9):
Chromosome 6 (position 51016175)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 51065653 |
GRCz11 | 6 | 51064872 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGCTCCTTGTCTCCTGTAGGCCCCATGCAGGAGACCGTCAGGGATTTCTG[G/A]AGRATGATTTGGCAGGAGAATTCAGCCAGTATCGTCATGGTAACCAACCT
Long Flanking Sequence:
GCCCTTTAAGCTGAATACTATATAGTAAAATATAATGTACTGTCATCAAGACATTGACAAAATAAGTAAATTTTTAGAAGTTAGATATTAAAACTGTTATGTTTAAAAATGTTTGTTAAACAGCACTTTGGAAAAACTTAGTGATATTAAGTGATGAATTGAAATAACTACATGTTTTAGTACGTGTTAAATTCCTGCCTACTTTAATTTTAACTTTAGCTTTTACTTGTAGTGTACTGTCGTCCACCAAGCTGATTTATTATCTTAATCTATATCAGTCCACCATTGTCCATTAGAAAAGCAACCTAGTACACACTATTATGAATTGCTGTGGACCTGCCATGATCTTTCCTTCAGGGACTGTCTGTGAATCCATAAAGCAATGTTGCATCTTATTTCGGGTTGTTTAGTGAGTGTTGCGTGATCCCGATGGAGGTTTGCTAAATGTGGTGCTCCTTGTCTCCTGTAGGCCCCATGCAGGAGACCGTCAGGGATTTCTG[G/A]AGGATGATTTGGCAGGAGAATTCAGCCAGTATCGTCATGGTAACCAACCTGGTGGAAGTGGGCAGGGTGAGCTTCTTCTAATGATCTCATTCCTTAATAAATATTACCGGATTAAAAGGGTTACTTACAAAAGCGCTGCTCTGGTTGATACACATTTAATCTCATAAAAACACACTTTGCTGAATCATCTTTTTTAAAGTATGAAATCCAAACTGATACTATTTTTCATAGAATATTTCAGTATTTATTTTCAATGTCTTATGCATGCACACAATAGAGAAGAAACGGCTGTATCTGCTTTCATTCTATGCCAACTAGTGCCCCTATTACTGTATGCTTTTTCCAAAATTACCTTCCATATATAGGGTTATGAAGCTCTTTGTGAAAGTTAAAGTTCTTTAAAGGTTTAAAGCTCAAATTGGATGATGAAGAAAGTTATTTTTTTCAACACAAGAAATGGATTCTGAACCACTGAAGTCATCTCGATCCCCAAAACCCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15571
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000092493 | Nonsense | 216 | 237 | 7 | 9 |
ENSDART00000108571 | Nonsense | 1427 | 1496 | 32 | 34 |
Genomic Location (Zv9):
Chromosome 6 (position 50975530)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 51025008 |
GRCz11 | 6 | 51024227 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGCTGGTCAGACGACTGGCCAAATGGCARGAGCAGTATGAYGGAGGAGAT[G/T]GACGTACAGTCGTCCACTGCCTGTGAGTCTGACCTCCACCACACACAGAT
Long Flanking Sequence:
AAAATTCATTGTAGCCTCTTATTTAAACCTTAAAAACTTTAAGATGAGACTGAATTGATCAGAAAGATTTTTTTTTATCTTGTGGAAATTATATTCTGAAGAATGTTGGAAACCAGCAGCCATTGACATCCATAGTAGAATCAAACAATCAACAACAACAAAAATCTATGGAAGTCAAAGGCTGCAGCTTTCCAGCATTCCTCACAATATCTCTTTTTGTGTTCAACAAAAGAGAGAAAGTCCACCATATTTGAAATATTTAAGTAAATTTAAATAGTAAATGATGACAGTATTTTCAGTTTTGGGTGAAGTATCCCTTTAATGGCTTCTGGATAAATGTTTTGCTGTCCTGTTTCCAGCCTCAAGACGGCTACCGGCTGGTCCAGCATTTCCAGTTCATCGGTTGGCCTGCGTACAGAGACACGCCGCTGTCCAAACGCTCCATCCTGCAGCTGGTCAGACGACTGGCCAAATGGCAGGAGCAGTATGATGGAGGAGAT[G/T]GACGTACAGTCGTCCACTGCCTGTGAGTCTGACCTCCACCACACACAGATATCATCACACACCAGCATATGAGCAGGAATGAAACGCTATGAGGAGCAGATTTGATAGGACAATATTCATAAACAAGTAGTAGTATAATGTCAGCACTGTATCTTTTCAGAGGCTGCATACCTCGACAATACAAGTACACATGAACATCTAAACTATAGTCTGTAAAATCACTCCTTAGTAAGAAATTTCAGTCTTTTTGTTTTTGACATTTGTGTAGTTAGATAGCGAAGTAAATTGAAACCTAAATCATACATTTTAAATTAAATTTTCTTTTACAAAACATCCTGCCGTTATCAGTGCGCAATAAATCTTGGGATGTTGTTGGCCATAAAGGATCCATCAGTGGAATCCTTCATTACCTGCGAAGCGAAGGATGCATTTGGAGGCTGAATTTAAAAGAGTCTTCGAATTTGTTCGAAATGAAACAGCCTGCATCGTGTCGTAATGAT
Associated Phenotype:
Not determined