ZMP
col6a2
Ensembl ID:
ZFIN ID:
Description:
Col6a2 protein [Source:UniProtKB/TrEMBL;Acc:A3KNX1]
Human Orthologue:
COL6A2
Human Description:
collagen, type VI, alpha 2 [Source:HGNC Symbol;Acc:2212]
Mouse Orthologue:
Col6a2
Mouse Description:
collagen, type VI, alpha 2 Gene [Source:MGI Symbol;Acc:MGI:88460]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa15560 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa15560
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087597 | Nonsense | 188 | 1015 | 2 | 27 |
| ENSDART00000103187 | Nonsense | 188 | 310 | 3 | 9 |
| ENSDART00000129629 | Nonsense | 188 | 303 | 3 | 8 |
Genomic Location (Zv9):
Chromosome 11 (position 34786523)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 33687460 |
| GRCz11 | 11 | 33950262 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCACGMGATGAAAATATTAGGATCTTCGCTGTGGCATCGTCCAGGAATT[T/A]GGAGGAGACGGGACTCAGGGAGATWGCAAACTCACCCGCTGGAGTTTACC
Long Flanking Sequence:
TCCCCAAGTGTGTTCTGTCCCTTCAGAGAGTACCGAATGCCCGATCGACTTGTACTTTGCTATTGACACATCTGAGACCATCGCTCTTCAGGAGAATCCGCCAGGCAGCTTGGTAGAGAGTATCAAAGATTTCACCATCAGATTTGCTGAGAAGCTCCAAAATGTGAACTACAGAGGATCCGTGAACATCACCTGGGCCATCGGAGGACTCCACTTCTCCCAGCTCCAGGAGTTCTTCAGCACCATCACCACTAAAGAGAAGTTCATCAGTAATCTCCGGCCCATCAGATACCTAGGCAGGGGCACGCACATTGATTGCGCCATCACCAACATGACCAAGCAGCTGGTCCGCTTTCCATCCAGACCCGATGCCAAACGATTCGCCGTGGTCATCACTGATGGTCACGTGACTGCGAACCCATGCGGAGGGATCAAAGTGGCGGCAGAACGGGCACGCGATGAAAATATTAGGATCTTCGCTGTGGCATCGTCCAGGAATT[T/A]GGAGGAGACGGGACTCAGGGAGATAGCAAACTCACCCGCTGGAGTTTACCGGGATAAATACATGGCGGTGAATCTCACTGGAACACGGCCGGTCATTGTGACGTCCACAATCGATCGCATTTATGACACAATGGTAATGCAAAGCTTTTTATTAGTGCTGGGAAAAGATTACTCGCGATTAATCACATCCAAAACAAAAGTGATAGATGTGTGTGTTATATAAGCAATATCACACTTGGAGCAGTGCGATATAGCTGTATATCAGCCCTGGTGGGAGGCGTGCAATGGCTTGAGGCCTCAGGCCGAGTGCCTTAGTGTCCCTCCAGTGACAATACACAACCATATCGCACTGCTACGAGTGTGATATTGTGTTTATACAACAGTTCAACGACATATTCATGTATATTAAAAAAATCAAACACGAAGAGTCTCAAATAACCTCAAAAACTACTTTTTTTCCGCCATTCATTAACATATGCAGCTGACCGCAGAACAGCAAA
Associated Phenotype:
Not determined