ZMP
si:ch211-105n9.1
Ensembl ID:
ZFIN ID:
Description:
Patched domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q5RIV7]
Human Orthologue:
C6orf138
Human Description:
chromosome 6 open reading frame 138 [Source:HGNC Symbol;Acc:21345]
Mouse Orthologue:
3110082D06Rik
Mouse Description:
RIKEN cDNA 3110082D06 gene Gene [Source:MGI Symbol;Acc:MGI:1920485]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa15542 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa15542
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000022572 | Nonsense | 522 | 916 | 3 | 3 |
| ENSDART00000146055 | Nonsense | 503 | 897 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 36093915)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 36166428 |
| GRCz11 | 20 | 36069307 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTCAGCACTTCCTAAGGGAGCATTACACAGAATGGATAACCAACACCWA[C/A]GTCAAGCCTTTYGTGGTGATSCTCTACCTGATTTATGCCTCRTTTTCRTT
Long Flanking Sequence:
TTTGTGTCTTTGTTGTTTTTAGGACATGGGACGAAGGGTGTGTTTGAGCTTCTGGCAGGCTGGAGAAGAACCAGAGAGAGTTTGCCCTTCAAGGAGAGAGTGGCGGATGCGTTTGCTGATGTGATGGTGTGCTACACTATGACCAGCTCGCTCTACATAATCACCTTCGGCATGGGCGCCAGTCCTTTCACCAACATTGAGTCTGTGAAAGTCTTTTGCCAGAGCATGTGTGTAGCAGTACTGGTTAACTACTTTTATGTATTCTCCTTCTACGGCTCCTGCCTGGTGTTTGCCGGGCAGCTGGAGCAAAACCGATATCACAGCGTCTTCTGCTGCAAGATCCCCTCAGTGGAGTATCTGGACCGCCAGCCCACTTGGTTTAAGACCATGATGAGCGACGGCCATGATCTGTCTACACACCACGACAGTGTCCCGTACCAGAACCACTTCATTCAGCACTTCCTAAGGGAGCATTACACAGAATGGATAACCAACACCTA[C/A]GTCAAGCCTTTTGTGGTGATCCTCTACCTGATTTATGCCTCGTTTTCGTTCATGGGATGTTTACAAATCAGCGACGGCTCGAACATAATTAACCTGCTAGCTAGCAATTCGCCCAGTGTGTCGTTTGCCCTGACCCAGCAGAAATACTTCAGCAACTACAGTCCTGTGATTGGGTTTTACATCTACGAACCCATCGAATATTGGAACTCCACAGTACAGGAGCACCTCAAGACACTGGGACAGGGCTTTAATAAGATTTCCTGGATCGATAATTACTTTCACTTTCTGAGGGTTGTGAATATTAGCGCGTCCACCAAAAGTGACTTCATTAGCATCCTTAAAACTTCTTTCCTGAGGAGCCCAGAATATCAACACTTTGTGGACGACATCATTTTCTCCAAAAACGGAGCCGAGTATGACATTATTGCATCCAAGATGTACTTGGTGGCCAGAACGACCGAAAAAACCAGGGAGGAGGTCGTGGAGCTGCTGGAGAGACT
Associated Phenotype:
Not determined