Busch Lab

ZMP

snapc1b

Ensembl ID:
ENSDARG00000003827
ZFIN ID:
ZDB-GENE-040426-716
Description:
snRNA-activating protein complex subunit 1 [Source:RefSeq peptide;Acc:NP_956548]
Human Orthologue:
SNAPC1
Human Description:
small nuclear RNA activating complex, polypeptide 1, 43kDa [Source:HGNC Symbol;Acc:11134]
Mouse Orthologue:
Snapc1
Mouse Description:
small nuclear RNA activating complex, polypeptide 1 Gene [Source:MGI Symbol;Acc:MGI:1922877]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa15527 Essential Splice Site Available for shipment Available now
sa14120 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa15527
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000003888 Essential Splice Site 44 350 2 10

The following transcripts of ENSDARG00000003827 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 13 (position 37996162)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 37472974
GRCz11 13 37598864
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
NNNGTTGGTATTTTTWTTTTTCAATGTTTATTTCTATTTTTTTCCCTGCA[G/A]TGGTAAACAAGAGCCAAGAGAGAAAAGGAYTTTTGCTCGTCTGGTTCTGT
Long Flanking Sequence:
TTTGATGATGAGTAAATGTTGTACACTACAGTGGTCTTCCATTCCGCCTAAGCACAACCCAAAGCAATGACCGTTTAAATGACAACATTATGACACAGTTTTGACAAGTTTGGTACAACATTGTAGGAAGGTCGCTGAGGCAACGTTGTGTGTTTGTTGATATATCCACTAATCTATATTAGAAAACGCAGTGCTTGTGGCTGATCAGCAACATTTCATGACCGATTGATTGTAAATAAGATTATTACCCTGTTTTACTATGTTATAACTGTGTTTAGTGTTTAAAATTACACATGAACCACATGAAAAATAATGAATGCAAAATACATATTTTCAGTTTTCCACAAATTCCAAATGACATTGAATTATAACCGTGTATTCAATTTACAAGAATATATCCACATTTTTAGTTTAAAACACTTTCCATATCATGTATTTTGATTGTTGACTATTGTTGGTATTTTTTTTTTTCAATGTTTATTTCTATTTTTTTCCCTGCA[G/A]TGGTAAACAAGAGCCAAGAGAGAAAAGGATTTTTGCTCGTCTGGTTCTGTCTGTGGCGTGTCAGTATTTCTTCCCTCCATTCACTTTCCAGATCAGAGTCGGGGCCCTTTATCTGCTGTATGGGCTCTACAACACACAGCTCGCCACACCCAGAGAGAAGGTGTGCTGTCATTCTATTCATCTTTACTAGCCCTCTGGGTTTCTGTTTGTCTCAGGGTTTCTGTTTACAGTAGTTTTTTGGTTACTAGAGCCTGAGGTTATTCACTAATGCATCATTACAATCTTATAAAACACATACACAAAATTGTTAAAATGTCTTAACCCCTATGTGCTATTAGGGATGTTTTTATTCACTCTGGGCTAATTTTAAGTGTCAAATTGGCCAATTTGTTTTCAGCAAATAGAATGCTTTGAAAATAAAATTAAAAAAAAAGATTCAAAAATACACTCTGGGCAAATTTACTACCGTTTCGTTATGTTGGTAGTTGTTTTTTCCCCAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14120
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000003888 Nonsense 125 350 3 10

The following transcripts of ENSDARG00000003827 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 13 (position 37993942)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 37470754
GRCz11 13 37596644
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATGCAGTTTGAGAGGGAWGCRATGAACTCWCAACATTATGATGTTACATA[T/A]ATCTTCAGAAAGCTCCTGTCAGAAAAAGCTTTCCACTTTACGGCCATGCC
Long Flanking Sequence:
TTTTACTGTATAGAACTCCATATAAAAGCCAGAAACGTTTTGCACAGGCCTATCTAAAGCATTAATGGTACCAACTGATGATCAACAGTAAAAATGACACATTTCCCAACAGGAAAAACCATCAACAATCAAGAGTACGTGAGTATATGGTGTCATGGCTTTGCATTTGATTTTTAGGTCAGTGGGAGAAAAACAGCCACCAACTTAACGAAAGAGGAGTCGATTTACTATACTATACATGAGGGTTTAATGTGAACATGTGTGTGTTTTTTGAGCTTACCAATTATCATTGCAAACACAAAGCAACATTTGAAGATATAAAATATTCTTAATTTGACATGAAAGGGTAATTAAATGACGATGTTTTGCATTTAAATGCAACTCATGCTGTGTTTTTCTGCAAATTCTTCTTTTTAGATTCGCATCGCTCTGAAGGACTGGAAGGATGCTATGCAGTTTGAGAGGGATGCGATGAACTCACAACATTATGATGTTACATA[T/A]ATCTTCAGAAAGCTCCTGTCAGAAAAAGCTTTCCACTTTACGGCCATGCCAAACCTGGTAGGTTACAAAGCTCTGTGTTTATGCATATCAAGTGTAATCAAGTGTAAAAAATGGAATTAATTACACAACATTTTGCCCAGAAAACATTTTCGACCTAATTTAAGCCTATATTTATTGTTGTCCTCTTGAAATTGATGAAATTGCGTCTTAATTCCAGATATAAACAGTATCCAACCAACATTTTACTTTGTCCTGAGTAATTAGTAGTATGGTAGTTTAATCATTGCTCATTATTGTGTAATTTCTCTGTAAACCATTTACAAAGTTGGCTACCGTATGATGCATAGTCAGTTAGAATAAATACCAATATGGATCAGATCATATGGAATGGGTAGAGTGTTAAAGGTGACCTATTATGCCCTTTTTTCAAGAAATAAAATAAGTCTCTGATGTCCTTAAAGCAGGGGTCTCGCTCGCTCGCCCGCGGGCCATTTGCGGCC
Associated Phenotype:
Not determined