ZMP

tnnc1a

Ensembl ID:

ENSDARG00000011400

ZFIN ID:

ZDB-GENE-030523-1

Description:

troponin C, slow skeletal and cardiac muscles [Source:RefSeq peptide;Acc:NP_852475]

Human Orthologue:

TNNC1

Human Description:

troponin C type 1 (slow) [Source:HGNC Symbol;Acc:11943]

Mouse Orthologues:

AC154446.1, Tnnc1

Mouse Descriptions:

troponin C, cardiac/slow skeletal Gene [Source:MGI Symbol;Acc:MGI:98779]
troponin C, slow skeletal and cardiac muscles [Source:RefSeq peptide;Acc:NP_033419]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa15521	Essential Splice Site	Available for shipment	Available now
sa14726	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa15521

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000023537	Essential Splice Site	106	161	4	6

Genomic Location (Zv9):

Chromosome 23 (position 4950413)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	4959112
GRCz11	23	4894697

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

AAAGGAAGGCCWGAGGAAGAACTGGCGGAACTCTTCCGTATGTTTGACAA[G/A]TRCGTCTGTCTTTACACCAAATTCCRAGAGCAAACTGGTGTTGGGTTTAA

Long Flanking Sequence:

CTTAGCTGGTCAGGCTAGGAGATGACCAGCTAAAACCAGCTTGACCAGCCTAGGCAGGTTGAAAGCCCAGCCAAAACCAGCTATGTCCAGCCCAAACCAGGCTGGTCAAGCTGGTTTTAGCTGGTCATTTTCCAGCATGACCAGCTAAGACCAGGCTGCAAATGGTTGGAAACCAGCCTGAAACCCCTGTTGGCTGAAACCCCTCTAAAATCAGGCTAGTAAACCAGCTAAAACCAGCCTAGGCTGGTTTAAGCATTTTTTTTTTGCAGCAGGGGCCTGAAGCTGAGATATCACTGTTGTTAAATGGCTGTTAAGATAATGTGATTTTTCAGTTTGCTGGGTCAGTTTTAAAAATTTAAAAGAAATGTTGGTCGTTTTCATACAGGAAGTGGTACGGTGGATTTTGAGGAATTTTTGGTCATGATGGTGAGGTGCATGAAAGATGACAGCAAAGGAAGGCCAGAGGAAGAACTGGCGGAACTCTTCCGTATGTTTGACAA[G/A]TACGTCTGTCTTTACACCAAATTCCGAGAGCAAACTGGTGTTGGGTTTAAAGGCTTCTGATTGCATTTGATTGCATCTGGACAGGAATGCAGATGGTTACATTGACCTTGATGAACTGAAGCTAATGCTGGAAGCTACAGGTGAAGCCATCACTGAAGATGACATTGAGGAACTGATGAGGGACGGAGACAAAAACAATGACGGAAAAATTGATTATGATGGTAAGCATGTGTTTTTATTTATACTCTACTCAAATCCACTCACAATAAAAAAGAAAGATAGAAAAGAGATTAATTATTATATGGACCACTGGCCATCTACTTTTTTTTTTTTTTTAAACTCTGTTACCACTGGCTACAAGGCTAGTGTCGTCCTTAAATAGAAAAGTTATAAAAGCCTTTCAAATAAAGGTATCTAAGGTTCAGAATAGTCCATTACTTTTTAGTAAACGTCTCAGCCCTGATATCAGGAGTGCCCATTTTTTGGTATGATGGGATACT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa14726

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

G > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000023537	Nonsense	146	161	5	6

Genomic Location (Zv9):

Chromosome 23 (position 4950616)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	4959315
GRCz11	23	4894900

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CTGAAGATGACATTGAGGAACTGATGAGGGACGGAGACAAAAACAATGAC[G/T]GAAAAATTGATTATGATGGTAAGCANNTGTTTTTATTTANNNNNNNNNNN

Long Flanking Sequence:

TCTAAAATCAGGCTAGTAAACCAGCTAAAACCAGCCTAGGCTGGTTTAAGCATTTTTTTTTTGCAGCAGGGGCCTGAAGCTGAGATATCACTGTTGTTAAATGGCTGTTAAGATAATGTGATTTTTCAGTTTGCTGGGTCAGTTTTAAAAATTTAAAAGAAATGTTGGTCGTTTTCATACAGGAAGTGGTACGGTGGATTTTGAGGAATTTTTGGTCATGATGGTGAGGTGCATGAAAGATGACAGCAAAGGAAGGCCAGAGGAAGAACTGGCGGAACTCTTCCGTATGTTTGACAAGTACGTCTGTCTTTACACCAAATTCCGAGAGCAAACTGGTGTTGGGTTTAAAGGCTTCTGATTGCATTTGATTGCATCTGGACAGGAATGCAGATGGTTACATTGACCTTGATGAACTGAAGCTAATGCTGGAAGCTACAGGTGAAGCCATCACTGAAGATGACATTGAGGAACTGATGAGGGACGGAGACAAAAACAATGAC[G/T]GAAAAATTGATTATGATGGTAAGCATGTGTTTTTATTTATACTCTACTCAAATCCACTCACAATAAAAAAGAAAGATAGAAAAGAGATTAATTATTATATGGACCACTGGCCATCTACTTTTTTTTTTTTTTTAAACTCTGTTACCACTGGCTACAAGGCTAGTGTCGTCCTTAAATAGAAAAGTTATAAAAGCCTTTCAAATAAAGGTATCTAAGGTTCAGAATAGTCCATTACTTTTTAGTAAACGTCTCAGCCCTGATATCAGGAGTGCCCATTTTTTGGTATGATGGGATACTACTTTATACATATGTTACAGTTTTCCTACAGTGGCATTATAGCGCCCTATTTGATGCAAATCCTTTCTTGCCTTTGCCTCATGGGTTTCCTTCTATTGCAGAGTTCTTGGAGTTCATGAAGGGGGTGGAATAGATGATGAAGGAATGTCTTCCTGGTGTTTCTCCTTGTGGATTGACTACACACACATTTCGTTTTATTTTCA

Associated Phenotype:

Not determined