Busch Lab

ZMP

vars2

Ensembl ID:
ENSDARG00000056717
ZFIN ID:
ZDB-GENE-060503-575
Description:
valyl-tRNA synthetase 2, mitochondrial (putative) [Source:RefSeq peptide;Acc:NP_001124133]
Human Orthologue:
VARS2
Human Description:
valyl-tRNA synthetase 2, mitochondrial (putative) [Source:HGNC Symbol;Acc:21642]
Mouse Orthologue:
Vars2
Mouse Description:
valyl-tRNA synthetase 2, mitochondrial (putative) Gene [Source:MGI Symbol;Acc:MGI:1916165]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa23537 Nonsense Available for shipment Available now
sa15493 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa23537
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000079251 Nonsense 101 1057 4 30
Genomic Location (Zv9):
Chromosome 19 (position 27930405)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 27860517
GRCz11 19 27444740
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGCCCTTCCCACAATCCTACAGCCCAGAGTATGTGGATTTTGGCTGGTA[T/A]CAGTGGTGGGAGAAACAGGAATTCTTCAGTCCCGAGCAGCATGTAAGAGA
Long Flanking Sequence:
TTTTACAGGACGTGAATGATGATGGACTGAGCTGGTCAGATAAAGAAAAAATAAAGTACACAGCTAAACTCTCACCTGGAGAGAAGAAAGGTGATGTTTTTTTTTGTCTCTTCCTTTTTGTGTTTTTTTTTTGTGCAAAAAAAAAAAAAAAAAAAAACATTCTGTCATTTAGTCACCATCCACTTAATATTTATTTCCACTATTGAAGATATTTTAAAAAATGTTGAAAACCGTCAGCTATTATTTTTCCTAGTATGGATGTTAATGGCTGCAGATTTCCAACATTCTTAAAAATATAATTTTTGTGTTCAACAGAAGGTAGATTAGAAATTAGAAGGTAGTAAATGAATTTGACCGAATGTTTTGGATGGCGTTTGAGTTTGATGTCACTAATGCAGTTATTAGAGATGGCTATAATCCCTTTATATATCCTCTGTTTTAGACACCACTCTGCCCTTCCCACAATCCTACAGCCCAGAGTATGTGGATTTTGGCTGGTA[T/A]CAGTGGTGGGAGAAACAGGAATTCTTCAGTCCCGAGCAGCATGTAAGAGAGTCTACTTTAATTATTTTAAAATCTAAAAAAGGTACTACTTCCATTTTGTTATGAAATTGAAGGCTTAACTATGCAAAAGGGTCAAAGATGAAAACCCTTTTTTTATTACTGTTTATTAGAAGCCCTCATTGAAATCTTATTGAGTTATTCATTTTTCTTTGGCTTAGTCCCTTATTTATCAGGGGTCGCCAGCATATGTTTTATTCCAGCAAATGTTTTACGCAGTGAATGCTCTTCCAGTAGCAACTCCGTACTGGGAAACACCCATACACACTCACATTCACACACACAATCATAAACTACGGCCAATTTTTGTTTACCTATTTTACCAATAGTGCATGTCTTTGGACTGTGGGTAAAATCGGAGGAACTGGAGGAAACCCAAGCAAACATTTGGAGAACAACTCCACACAGAAATGCCAAACCAGTGACCTTCTTCCTGTGAGGCG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15493
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000079251 Nonsense 548 1057 18 30
Genomic Location (Zv9):
Chromosome 19 (position 27913827)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 27843939
GRCz11 19 27428162
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
KTCATGAGCAGGAGCATTGGGTTYGGGGCAGAAGTGCTGCAGAGGCTCAA[C/T]AGCRTGCCASTATAAAGTTTGGAGTGAATCCTGAGGCCATCWCACTCACA
Long Flanking Sequence:
CAAATCTTGAAATAGATTTTTCTGAGAATTTTACTAAAAAAGGTAAATAAATACAGTGGACAGCTGCATTTTCTTAAAATCGTTTACAGATTGTATTTATGACATCCACTTTTTGTTTTTTGCTCAATGAAAACTCCCATACTGCTGATATTTTGTCTTATTTTTAGAATAAACTCTTCCAAAGGCACAAATGAAAACCCCAAGCAGCACATGTAAAGTGGAAATAATCCATGATTTTTTTTTATCAGCTGTTTATTTTCTTGTTGCATAATGCTGACAACTTCAAAAATCTGCGTTTGTTGTCCAATACCGATATGAAGGCCTTTTGTGCATACCTATGATGATGATATCATTTTAAATTTTATATAGAAATCTTTGTGAAAATATAATCTGACATCTGCCCTGATTTGATCTGCCCTCTACCTGTTTTTTATGACTGTTCTTCACTGTGTCATGAGCAGGAGCATTGGGTTTGGGGCAGAAGTGCTGCAGAGGCTCAA[C/T]AGCGTGCCACTATAAAGTTTGGAGTGAATCCTGAGGCCATCACACTCACACAGGGTGAGCATCATTGAGTTCACTTAATCTACACTTTTGTCTTTATGATTATTATTATGTGTGCTGAAGAATATAAACATACAATGATAAATGTAGCTAGGCAAACTGTGTTTAGATTTTATTAAGAAGAAGTTAAATAACTGCTCTGGCTTTATATCTTTTATGCGCTGTAGCAGTAGGAAAATTGCATTAATTTGTGTAGTTAAAAATTATTTTTGTTTTATAAATAAACCTACTCTCTGCGTTTGGTTATACACATGTAAAAACATGTCCACATTGAAACATACAGTGAGCGTAAACACCTTTTACAGCAGGTTTATTTCACAAACAATTCACAGTAAAGATTACATTAATAATTATAATACAAATATATAAAAAATACAATATATAATGCACAAATATATAAGTATATTGTATAATACAATATACAAATATAAAAAAATACTATA
Associated Phenotype:
Not determined