Busch Lab

ZMP

si:dkey-193c22.2

Ensembl ID:
ENSDARG00000076735
ZFIN ID:
ZDB-GENE-070705-337
Description:
Novel protein similar to vertebrate chondroitin sulfate proteoglycan 4 (Melanoma-associated) (CSPG4)
Mouse Orthologue:
BC067074
Mouse Description:
cDNA sequence BC067074 Gene [Source:MGI Symbol;Acc:MGI:3040697]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa15427 Nonsense Available for shipment Available now
sa20499 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa15427
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000114078 Nonsense 933 2304 2 11
ENSDART00000142897 Nonsense 933 2370 2 9
Genomic Location (Zv9):
Chromosome 5 (position 41855420)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 39630137
GRCz11 5 40230290
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATGGGAAGTTAATGCGAATCAACTNNNTGTCTAACTCTACCAAAGAYTTTGAC[A/T]AAATTATGTCCTTTACTAATCAGGATGTTCTTGAAGAGCGTATTATGTAT
Long Flanking Sequence:
TAGAGCTGGACAAAATTACAAGAGCTGTAATTGACTCTGATCATCTGTATGTAAAAGCCAATGGTGTAAGTCTGACTGATGACGAACTTTGTTTTAAATTGTTGACTTTACCAAGAAGAGGAATTATTGAAGTGAAAAATGCCAAGTTGGATTTGAATTCTACATTTTGTCAAAGGGACATCACAGATCTGAAGGTTGAATATCAACTACTAGAAAGATCATTTGAGGATACCACTGATGAATTTGTTTTCCACATATTTTCAAAGCATGCACATTCTGCTAGTCACATTTTCACAATCAACATTAAAGCAGATGTCAACAGCATTTTCATGACAAACAATGGACTGTCACTTCTTGAAGGTGAAAGTAAACTTATTACAAAGAATGAATTGTTTGCTGAAACTCTGAGCACTAAAGAAATCTACTACACAATTACAAAGACGCCAAACCATGGGAAGTTAATGCGAATCAACTTGTCTAACTCTACCAAAGACTTTGAC[A/T]AAATTATGTCCTTTACTAATCAGGATGTTCTTGAAGAGCGTATTATGTATGTTCATGATGACAGTGAAACAACTCAGGATGATTTTACCTTCATAGCCTCCACAAGCCCTGTAGCAAAGCTGTATGTTAGAGAAAATGATGTTGGCTCTAAGGAGGGTGTATTTAATATCTCTATAAAACTAGTGAACGATGAAAAACCCACTCGCATCGTAGACAAAGTTTTTAATGTTGTCAGAAACAAACAGAGATTGCTTACACTCGAGGACCTGTGCTATCATGACTCAGATTCAGACTTTAGTGATGGCGAGCTTGTCTATACTCGGCGTGGTATCCCAATGGGCGATTTGGTTCTTGTGAATGACACTTCACACAAGCTGTACCAATTTCGTCAAGAAGACTTAGAACAGAAACGAGTGCTGTTCATACACCACGGGATGAACTCTGGCCGTTTTGTCCTGTTTGTGTCAGATGGCAAACACTACGTGTCCTCTCTGTTGGAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20499
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000114078 Nonsense 1728 2304 9 11
ENSDART00000142897 Nonsense 1726 2370 9 9
Genomic Location (Zv9):
Chromosome 5 (position 41872200)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 39646917
GRCz11 5 40247070
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAATCTACTCACCAAACAACCTGAATCCAAACGTAGCTCTTATGAGATTT[G/A]GTACCAGGTCACTTCACTTCCACAGCATGGCGTCATCGTTGTGGGGGAAC
Long Flanking Sequence:
AAGTAATTTATTTAAAGGTTTTACATGCATTTTTATGGTGAATCTTTTTCTTGTTTCTGTTTTAAACAGGTGGATGATGGTGAAGTAGCATATCAGCAAAATCATGTGACTTCTTTGGGATGGGCAGCGCTAGACAAGTTCACATTTACAGTGTCGTCTCCTCCTGCCATGCTTGAAAGCCAGACGTTTGACATTGACATTTCTTATGAAAATGTTGGACCTGAACAAAGTTCTGTGCTCCTCGTAAATAAAGGTATGGTGTTAAATTAAATTCTGACAATGATTTTTAATACATTGTTTGCACTCAATCAGTTTGAATATTGAATTACTACATTACAAGTTGACTCAAAGCTTTTGTCAAAGAAATTAATATCTTTTTTTTATATATCCAGGTGTGGAGGTTGCTGAAGGTGACAAAGTACTAATTGACAAATCAACGCTGGACGCATCCAATCTACTCACCAAACAACCTGAATCCAAACGTAGCTCTTATGAGATTT[G/A]GTACCAGGTCACTTCACTTCCACAGCATGGCGTCATCGTTGTGGGGGAACGAAATCTTACAAAAGAAAAGCCGAATTTTTCTCAGTTCATCCTTAACAAGTACGGAATCACATACCATCATGACAACTCCGAGACCACCTATGACCATTTTGAGTTTGATGTGTATCTCAACCTGAAGAGCAAACCACCATCTCGACCCCTAGATACCTCTGAGGTTGTGTCAGAATCATTCAACATCACTATAATCCCCATAAATGATCAACCTCCTGTTCTGAAAACCAAAACCCCCAGCCTAAAAGTGGTTCAGGGGGACACTGTGACTATTGGACCCGACAACTTAAATGTGGTTGATCTTGATAACCCACCCACAGAAATTCAGTACACTGTGATTAGCAAACCTGGCAATGGTTTCTTAGCCATTGCAGATCACTTGAACGAGTCGGTGGACTCCTTCTCTCAGGCTCAGATTAATAACGGAGAGGTATTTTTCATCCATGATG
Associated Phenotype:
Not determined