Busch Lab

ZMP

LOC565254

Ensembl ID:
ENSDARG00000038235
Human Orthologue:
PKDCC
Human Description:
protein kinase domain containing, cytoplasmic homolog (mouse) [Source:HGNC Symbol;Acc:25123]
Mouse Orthologue:
Pkdcc
Mouse Description:
protein kinase domain containing, cytoplasmic Gene [Source:MGI Symbol;Acc:MGI:2147077]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa14501 Nonsense Available for shipment Available now
sa15337 Nonsense Available for shipment Available now
sa18146 Essential Splice Site Available for shipment Available now
sa42961 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa14501
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000055754 Nonsense 21 463 1 7
Genomic Location (Zv9):
Chromosome 17 (position 31223214)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 31147141
GRCz11 17 31164104
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGAAGTCCGTTTTGCGYTTTYGTCCTCYTTGCTTTGTTGTTTTTGTCTT[T/A]AACGCTTAWTGTGAAAAAGTGGCACTTYGGTCTCCARGAGAACGAGCCTT
Long Flanking Sequence:
GATACATATTAATAGTAATAACGATGTAATAGGGGTTGTTAGTTAGGGTTTAATTAACAATTTATATTTAAATAAATAACGTTTATAATATTCGATGTATTCATTTATTTATTTAGAAAATAAAATAAATCAATTCACACCTCAGCATGAACTTTATCAGTTTTATTTTAAAACTCATAACGTTTTAGCCTTTGATGATATGTATATTAAAACGCATAGGCTCTTTTATCTGTGTGTGTGTGTGTTAATGGAGGTTGCATTGTGTGGGAGGTGATTATTTGGCCATGAGCAGTAAGACACGCCCACTGGGCGTTACCGCAGCTCACACTTACTACACTAAATTACAGTACGCACGTACTCAAAGCGCCAGAGTGAAGTATGAACAGAGACGCTGTCGTACTTTGACAGTACACAAAAAGGACCTACACTTAAACTTGCCATGACTTTCCAAAGAAGTCCGTTTTGCGCTTTCGTCCTCCTTGCTTTGTTGTTTTTGTCTT[T/A]AACGCTTATTGTGAAAAAGTGGCACTTTGGTCTCCAGGAGAACGAGCCTTTTGGTGATGCTGCCCGCTCAGATGGTTCTGCTCCACAGCGCGACACATTGCGCCAACAACTTCAGGAAAGACAACAAGAACTTGTGCTCCTGGACATCACTTTTGAAGACATACAACAACAAGAAGGATTTAATGGGAAAATTAGTTTGGATAATCCAACTGCAGCTGACATTGGTTGTGAAGAACTTGGTGGCGTGAAAGCTGTTGACTTTCTTGGTTCAGGTTACACCAAAACAGTGTTAAAAGCAGCACTGCCAAACGGATTATTTGTGGCACTGAAATCTGTAAACCATCAAGGCACTGACATGAGATTATGCTTGGATGTTTTCCAAGATTCCCAGGGATGCCTTGAGCTGGTGTCGTTCAAGCTGAGGAAGGAGATTGTGTTATTGCAGAAACTTCAGCACCCTAATATTGTAGAGGTAAAAACAGCCTACAGTTTGTCTCATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15337
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000055754 Nonsense 63 463 1 7
Genomic Location (Zv9):
Chromosome 17 (position 31223089)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 31147016
GRCz11 17 31163979
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTTCTGCTCCACAGCGCGAYACATTGCGCCAACAACTTCWGGAAAGACAA[C/T]AAGAACTTGTGCTYCTGGACATCACTTTTGAAGACATACAACAACAAGAA
Long Flanking Sequence:
TAAATCAATTCACACCTCAGCATGAACTTTATCAGTTTTATTTTAAAACTCATAACGTTTTAGCCTTTGATGATATGTATATTAAAACGCATAGGCTCTTTTATCTGTGTGTGTGTGTGTTAATGGAGGTTGCATTGTGTGGGAGGTGATTATTTGGCCATGAGCAGTAAGACACGCCCACTGGGCGTTACCGCAGCTCACACTTACTACACTAAATTACAGTACGCACGTACTCAAAGCGCCAGAGTGAAGTATGAACAGAGACGCTGTCGTACTTTGACAGTACACAAAAAGGACCTACACTTAAACTTGCCATGACTTTCCAAAGAAGTCCGTTTTGCGCTTTCGTCCTCCTTGCTTTGTTGTTTTTGTCTTTAACGCTTATTGTGAAAAAGTGGCACTTTGGTCTCCAGGAGAACGAGCCTTTTGGTGATGCTGCCCGCTCAGATGGTTCTGCTCCACAGCGCGACACATTGCGCCAACAACTTCAGGAAAGACAA[C/T]AAGAACTTGTGCTCCTGGACATCACTTTTGAAGACATACAACAACAAGAAGGATTTAATGGGAAAATTAGTTTGGATAATCCAACTGCAGCTGACATTGGTTGTGAAGAACTTGGTGGCGTGAAAGCTGTTGACTTTCTTGGTTCAGGTTACACCAAAACAGTGTTAAAAGCAGCACTGCCAAACGGATTATTTGTGGCACTGAAATCTGTAAACCATCAAGGCACTGACATGAGATTATGCTTGGATGTTTTCCAAGATTCCCAGGGATGCCTTGAGCTGGTGTCGTTCAAGCTGAGGAAGGAGATTGTGTTATTGCAGAAACTTCAGCACCCTAATATTGTAGAGGTAAAAACAGCCTACAGTTTGTCTCATTGTGTTATGTAAAGTATTAGACATGCATAGGTTAAAATGTTTAATATGTGCCCTAATTGATCTTGTTGTGCTCTTTCTAGCTGAAAGGTCAATGTCAGGACAGCGTCCTGGTTGGTGGCATCACAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18146
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000055754 Essential Splice Site 217 463 2 7
Genomic Location (Zv9):
Chromosome 17 (position 31222516)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 31146443
GRCz11 17 31163406
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACTTCAGATGATCCAGCTCCTGCAGAGCCCCTGGGAAGAGCGCTTTCGGG[T/C]AAGARCACCACCCCCAGGCCTCCTATGGAGTGTTAATCAGAGATTCYCCA
Long Flanking Sequence:
TGGATAATCCAACTGCAGCTGACATTGGTTGTGAAGAACTTGGTGGCGTGAAAGCTGTTGACTTTCTTGGTTCAGGTTACACCAAAACAGTGTTAAAAGCAGCACTGCCAAACGGATTATTTGTGGCACTGAAATCTGTAAACCATCAAGGCACTGACATGAGATTATGCTTGGATGTTTTCCAAGATTCCCAGGGATGCCTTGAGCTGGTGTCGTTCAAGCTGAGGAAGGAGATTGTGTTATTGCAGAAACTTCAGCACCCTAATATTGTAGAGGTAAAAACAGCCTACAGTTTGTCTCATTGTGTTATGTAAAGTATTAGACATGCATAGGTTAAAATGTTTAATATGTGCCCTAATTGATCTTGTTGTGCTCTTTCTAGCTGAAAGGTCAATGTCAGGACAGCGTCCTGGTTGGTGGCATCACAGCAGTTCTGGAGCAGGGGATGCCACTTCAGATGATCCAGCTCCTGCAGAGCCCCTGGGAAGAGCGCTTTCGGG[T/C]AAGAGCACCACCCCCAGGCCTCCTATGGAGTGTTAATCAGAGATTCCCCACCCACTGTCCCCCCACAGGGCATACCTGAGGTGGGGGTGGATGAAATTCTTCAGCTTTAGCTGGATTAACTGGAGCCCCATCTCCATACCAACTGAGCCTGATCAAATAGTACAGAGGGGACAGATGTCTGTCTCAGATGTCCATCCTTTTACTCTTCTTTACCCTGATCAGTTCTTGGCACTGTTTGAGGGAGCGAGGTGATACTGAGTTTCACTACACCATGGAGTGTTTCATGTTCACGTTGGTGTGCAATAAGCAGGTGCTGATATTGTGTGCCTTTGATTTTTGATGATGACAAATGTGTTTAAGCTAAAGGGCTGTAATCGAGTGTCTCTTTGACATTCTTACCTTCTCTGAAAAGTCTTAACACGTGGTCGAGAGTTATTCAAGAAGGTGTTTGGTTTCATCCACCTCTGCTTTTGGAGAGCTGCTGTGGCTATATAGTGTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa42961
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000055754 Nonsense 224 463 3 7
Genomic Location (Zv9):
Chromosome 17 (position 31218261)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 31142188
GRCz11 17 31159151
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAAAGTTCCTTTTGATTGTGTTATCCCACAGGTCTGTCTTGGTTTGGTG[C/T]GACTCCTTCAATACCTGTCTGTCTCACCTCTGGGATCAGTTGCCCTGCTG
Long Flanking Sequence:
CACACACTTTTCTCCCTTGTGAGTTGAGTGCGCCTCCATCGCCGTGTGCGCGTTTTATTTACGGGCGCACCTTACCTGACGCGGACGCGCTGTGACCGGATCTCTCGACTATAGGATAACTTTATCCCCACAATTTTTCATAATTTAATTGCTATGTCATATATTTTAAAATATTTAAATGTGTGTTCTAAAGGTTGAAACAACGGGAGTGTTTGTAATTAAAGACAGAAAGAATTTTCAGTTTTGAGTGAACAAGCCTTTATAAAAACTGGGTAAAAAAAAAAACCCGTAGCGCCGGGCCTGGTTACACACATACTGTTTGCTATATGGAATGCAAAATCTTTGAAGCTCAATATCTCAAAATCATTCAGAAAGCAGATAAAACCTTATAATTCCTAGGTGAGGATGAACTGTCTGACAATTACAGCTAAATAGTCTTATTATTTTATTAAAAAGTTCCTTTTGATTGTGTTATCCCACAGGTCTGTCTTGGTTTGGTG[C/T]GACTCCTTCAATACCTGTCTGTCTCACCTCTGGGATCAGTTGCCCTGCTGGATTTCCAGCCTCGACAGTTTGTAATGGTGTCTGGAGAACTCAAGTTAACAGACTTGGATGATGCAAGTATTCATGAACCGGTCTGTCAAGAGGACTCTGACTGCCTGCTGCAGTTTCCCCTCCGCAACTTCACCCTGCGATGCTCCCCGTCCCAAACTTGCAAGGGTCTGAATGAGATGAGAAACCTCTACAATGCCTACAGGTGAGCACTTTTATTGTCTGAGCCACAGATAATGAAAAAAAGTTGTGTTACAAGAGTCTCAAGTCTCCCCTCATGTGTCTGTTATGATTAATTATCCACCCCGCTGAGTGTCGGGGCAGCAGTTGTAGTATATTGATCTCGCAGCATGAATCTCCACTCTGCTGGATGAATTATATGAAATATTTCCCCTACAGGTATTTTTTCACCTACCTGCTGCCTCATCAGGCTCCCCCGTTGCTGAAACCTC
Associated Phenotype:
Not determined