ZMP
trpv4
Ensembl ID:
ZFIN ID:
Description:
transient receptor potential cation channel subfamily V member 4 [Source:RefSeq peptide;Acc:NP_0010
Human Orthologue:
TRPV4
Human Description:
transient receptor potential cation channel, subfamily V, member 4 [Source:HGNC Symbol;Acc:18083]
Mouse Orthologue:
Trpv4
Mouse Description:
transient receptor potential cation channel, subfamily V, member 4 Gene [Source:MGI Symbol;Acc:MGI:1
Alleles
There are 7 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa1671 | Nonsense | Available for shipment | Available now |
sa15329 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa1671
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000088937 | Nonsense | 641 | 841 | 12 | 15 |
ENSDART00000138186 | Nonsense | 656 | 856 | 12 | 15 |
Genomic Location (Zv9):
Chromosome 5 (position 21583903)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 19296775 |
GRCz11 | 5 | 19800575 |
KASP Assay ID:
554-1617.1 (used for ordering genotyping assays)
KASP Sequence:
GTGTCGCTGTTGACCATCTGCCCTGATAAGGACACGTGTAAGGAAAACTG[T/A]CCTACATATCCCGAATGTCGAGACACAAACACCTTCAGTGAATTCTTGCT
Long Flanking Sequence:
AGTTATAAATTATAATATGACCAAACACCATAACATTTTCTTTTTTCTTTAGTAAGGATTTTATTTGTAAATCCTGTCCTCTTGAATTACACGTTGTTCTGCATGCTGATGTTTCTAAAAGCTGCAATTCCAGTAATGACTATTTCTCTTAAAGTGTACACTACTGCAGGCAACTACATTACATAAAACCCTCAGAATAATTAGAGCGCTCGCTGATCTTCCTTCCTCTCATTTTCTCAGTCTAATTATTCAACCCATTGTGTCATCAATTTGCTTATTATCTTCAGATTCTCATCAAAGATTTGTTCCGGTTCCTGCTGGTCTACGTGCTCTTCATGATTGGTTATGCTTCAGGTATTCCAATAAGAATCATCACTCTTGTTTAATATCTTCTAAAATGTTTATTCATAATGATCTATTTTGCATTCTGTGTTCTGTGCACCAGCATTAGTGTCGCTGTTGACCATCTGCCCTGATAAGGACACGTGTAAGGAAAACTG[T/A]CCTACATATCCCGAATGTCGAGACACAAACACCTTCAGTGAATTCTTGCTGGACCTCTTCAAGCTGACCATAGGCATCGGAGACCTGGACAACATGCTGAAAGGCGCACAGTATCCCGCCGTCTTCCTCATTCTGCTGGTCACCTACATTATCCTCACCTTCGTCCTGTTGCTCAACATGTTAATCGCTCTGATGGGGGAGACGGTGGGACAGGTGTCCAAAGAAAGCAAGAAGATCTGGAAATTGCAGGTGAGAGGAGAGCCTGAGGGGTAATGTGCAATCAGTTGTATGGATAGTATTATTAAGACTGAATAATGTTAGATAGTATAAACTTGTGGTCAGATGACCCACAATGGAAATTCTTGTTGTCAATTGGTTTCTTCTGTGAAATAAAAGAACTAACTTTTATTATTAGTGGTGTAACGGATCACAAATCACATGGTTTGGATAACATTGTTTTTTTTCCACATTTTTTGGCTCAGCAAATAGGGGAAGAGACA
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa15329
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000088937 | Nonsense | 764 | 841 | 13 | 15 |
ENSDART00000138186 | Nonsense | 779 | 856 | 13 | 15 |
Genomic Location (Zv9):
Chromosome 5 (position 21581754)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 19294626 |
GRCz11 | 5 | 19798426 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGAGATGGTYACTGTGGGCAAGGGTTTGGATGGAAAGCCAGAYAAAYGCT[G/A]GTGCTTCAGRTACAGCAACAAAATATCTGCTACATTTATGTTTATTAATT
Long Flanking Sequence:
TTACCATAGTTTTTTACATTTATGTTGCATGGGTGTTGAGATCACGATTTTTAATCGTGCTGCTTACACTGAATGCAATAATGCAGGCTAAACAGGTAGTGACAGAAAACACCTTTAATATCCTAAGAAACCCAGCACAAGTGGTTTGCTCCATATGAATTTTGTGCATATGTATTTAGTATCCTGTTTGACAAAGTAAATATTCATATTTAATATTTATTTGTGGAAAACAAACTCATTTTGTGTGTGATTGCTTGTATAAAAAAATCTGGTTGTAATAACATGAGAATCAACCATCTTTACTTAAGTTTTCTACGAGGACTTTTCCTTTTGTAAATGGCTTTAGTCTCCAACATGTAGTTTTTCTTTTCTTTGTTCTCAGTGGGCGACTACTATCCTGGACATTGAGCGTTCTTTCCCTGTGTGTCTGCGGCGGTCTTTCCGTGTGGGAGAGATGGTCACTGTGGGCAAGGGTTTGGATGGAAAGCCAGACAAACGCT[G/A]GTGCTTCAGGTACAGCAACAAAATATCTGCTACATTTATGTTTATTAATTTATTATATATTTTTTTCAATTAGAGCCTGTTTATTTTAATGAATAAGGCTAAACTTTGAAGTCTTCATTCTTAATTCTGCAGGGTGGACGAGGTGAAGTGGTCCCACTGGAATCAAAATCTGGGCATCATCAATGAGGATCCAGGCCAGAAAGACCTTTCTGAACACACACAGGGTGGACGGGGCCTTCGAAGAGGTAAGTTAAGGGGCAAATTATTTAAAAAAAACTATATTTTTGGTTTGTAGTCAAAATTAAAAAGTTAAAAAAATACATTATACATTGCATATTTTCGTGCACTTGGTCAATTGTATTGTTTAGAGGGAGAGAAAAAATACAAACAAGTTGCAATTGTGTATAGAATATATTTTATGATTTCATTCAAAAATAATGTTATTTTATAATAATATATACAGTCTGGAAAATAAGTCACCATTTTTCTCTGAAAAAATA
Associated Phenotype:
Not determined