ZMP
ptpn21
Ensembl ID:
ZFIN ID:
Description:
Protein-tyrosine phosphatase D1 [Source:UniProtKB/TrEMBL;Acc:C7U116]
Human Orthologue:
PTPN21
Human Description:
protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:9651]
Mouse Orthologue:
Ptpn21
Mouse Description:
protein tyrosine phosphatase, non-receptor type 21 Gene [Source:MGI Symbol;Acc:MGI:1344406]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa22978 | Nonsense | Available for shipment | Available now |
sa15217 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa22978
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000097705 | Nonsense | 47 | 244 | 2 | 5 |
ENSDART00000135374 | Nonsense | 576 | 837 | 5 | 9 |
Genomic Location (Zv9):
Chromosome 17 (position 2400937)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 2446582 |
GRCz11 | 17 | 2622968 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGTTCACGGAGTACGAGCAGGTGCCCAAGAAACGACCCAACAGTGAGTA[C/A]AGCATCGCTCAGATGCCCGAGAACAACGACAGAAACCGCTTTCAGGACGT
Long Flanking Sequence:
AAATCACTATGTTTTAGAGAAGTCTAAATCCAAATTAAGAATTCAAAGGAAATCATAGTTTGTTGATGTTATTCATAGATGAGTCTAAAATTAGTTGTTTATTTTTGTGTTTATGTTTAATGTTTAATGTATTATAATGTTTATATTTAATATAATAAATAATTGTTTTATCATATTAATAGTAACATAATCATGATAATATTAATAAATAATAAAATATTAATATTAGGTATTATGTTCAATCCTGGTTTCTAGTTGTAATTAATTGTTACCATGCACAGTAGCTTTACATAGTAGATTTCAATCGACAGCTTTTTGGAAGTGTAATGTGAAAGGACAGAAACAAGTTCATGTAATCAGCTGGATGTTTGTTATCATGCTGCATTTTTTTGACTGCGTTTTTCTTTGTTGCAGTGTAAGTTTCTGGAGCAGCGTTTGGATCAGGGGATGGTGTTCACGGAGTACGAGCAGGTGCCCAAGAAACGACCCAACAGTGAGTA[C/A]AGCATCGCTCAGATGCCCGAGAACAACGACAGAAACCGCTTTCAGGACGTCCTGCCCTACGACGACACACGTGTGGAGCTGGTGCCCACCAAAGAGAACAACACAGGCTACATCAACGCCTCGCACATCAGGGTAATTATATACACACACAACTTGCCTTGCCTAATATTTAAATATAGAATGCATTTATGTGCATTTATTTTGTTGTTTATATATTTTAAGTAGTGCTGGGCAAAGATTGTGTAAAGCACTTTAAGTTACCATTGTGTTGGAAATGTGCTATATAAATCAACTTGCCTTGCCTAATATTTAAATATAGAGTAGAATGCATTTATTTTATGATTATATGTATTTTTAGTAGTGCTGGGCAAAGATTAATGGCTTTAATGTTTGTTAAGACATATCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACGCAATATATTTATATAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15217
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000097705 | Nonsense | 122 | 244 | 3 | 5 |
ENSDART00000135374 | Nonsense | 651 | 837 | 6 | 9 |
Genomic Location (Zv9):
Chromosome 17 (position 2397435)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 2443080 |
GRCz11 | 17 | 2619466 |
KASP Assay ID:
2261-0491.1 (used for ordering genotyping assays)
KASP Sequence:
AGGGTCCGCTTTCCAGCACCTGTCAGGATTTCTGGCAGATGGTTTGGGAA[C/T]AAGGAGTSWCCATCATCGCAATGGTTAMAGCAGAGGAGGTGAAGTAGAAA
Long Flanking Sequence:
ATATTTTATTCAAAAACATTATGTATTAAAATGTTAGTAAATTAAAATGATTGTGCAAATCAAAACTAGAAATGTGAATAAAAATAGAATAAAGTCTTGCCCTGATAGACTACTTGCCTAAAATTTAGCGATTTGTTTAATTCTATTTAAAAATGAAATTAGTGACGCACATGCATCTAAAAAATGTAAAGACGTGTAGAAAGTATTGGTAGAGAAAATAAAGATTGTATATAATACTATATGACACTAAATGCCTATATGTCATTATTAAATGACCTGAAATTGGTTTGTTTACATTTGGTGGATTAATATTTATTATCATACACCTGAACACCAATAATTGCTTATTTTGAATGATATCAGAGATATAACGTCTTGATGTTGTTTTTTTCCTCATGCGTGTTGTTCAGGTGACGGTCAGAGGTAAAGAGTGGAGTTATATTGCGTCTCAGGGTCCGCTTTCCAGCACCTGTCAGGATTTCTGGCAGATGGTTTGGGAA[C/T]AAGGAGTGTCCATCATCGCAATGGTTACAGCAGAGGAGGTGAAGTAGAAAATATGCATGCACAGTGGAAAACGTGTTGGGTTATGCTTTATCTGATTAACCCTTTAAATTGTAACTACTGAGAGATTTCAGCTGCTGTCTGGGCTTTCACTGCCTTTCCACACCTCCCTTTCTTCATGTGTTCAATACTTTTTCTCCTGCGTCATTTTAATTATAAATTAATTAGTTAAGTTTTCTTTGTACATATGGATTTCTTTAGTTGTTATTAACATCTGGGTTAAATTTCAAGTAAATGTCACCTTTAGAAATATGTTTTTTTGAGAATAATGGTGACGTGTTCAATACTTATTTACCCCGCTGTATTTGGTGTCAGCCTGGTGTGTGTCCTGGCCTTTAAAATGGGTTTGTGTTTTTGTTCTGCAGGAAGGAGGCCGTGAGAAGAGTTTCCGCTACTGGCCTCGTCTGGGCTCTCGACACAACACTGTTACATACGGACGCTTC
Associated Phenotype:
Not determined