Busch Lab

ZMP

CHD9

Ensembl ID:
ENSDARG00000074498
Description:
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:25701]
Human Orthologue:
CHD9
Human Description:
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:25701]
Mouse Orthologue:
Chd9
Mouse Description:
chromodomain helicase DNA binding protein 9 Gene [Source:MGI Symbol;Acc:MGI:1924001]

Alleles

There are 10 alleles of this gene:

Allele Name Consequence Status Availability
sa11275 Nonsense Available for shipment Available now
sa21008 Nonsense Available for shipment Available now
sa15134 Essential Splice Site Available for shipment Available now
sa21009 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa11275
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000027807 Nonsense 583 2948 2 38
Genomic Location (Zv9):
Chromosome 7 (position 37884813)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 36286414
GRCz11 7 36557891
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AACAGCAGATGGAGTCGCCCCTTTCGGATGATAAACAACAGAAGGCCAAT[C/T]GAATCATCTCTGAGGCCATCGCCAAAGCACGAGAGAGGGGAGARAAAAAT
Long Flanking Sequence:
GGTCATAACTAGAGGAGTAATGTTTGAGGCTGTTGAATTCAGCTCATCCTCCTTTTTCATGTGCAAAAGCGTTCTCATATTGACCGCCAGACTAGTCCACATGGCGTCATGGTATCTTAAATAGTGTATTGTTCATCATGGGTTTAGCATATGGAATTACAGAATCCTGAAATAGAAACCTATCTACTGGCTTCCTGTATTGTCCTGCCTACACAACTATTAAATGAAGCCTGTCCTATGGAGTGCTTTATTGTCATGTTTGGGTGATTTAACGTATTTCATTTTCTCTTTTCTAACAGCCTCCTAAGAACACTAATGGTCCCAGCAGCCAACCGCGGGTACACAGCCCTACATTGAAGAGCAGCTCCTCTTCTTCCTCCTCTTCATCGTCGTCGTACATGTCAGAGAAGCGGCTGCAGAAGCAAAAGCAGCAGCAGCAGCAGCAGCAACAACAGCAGATGGAGTCGCCCCTTTCGGATGATAAACAACAGAAGGCCAAT[C/T]GAATCATCTCTGAGGCCATCGCCAAAGCACGAGAGAGGGGAGAAAAAAATATCCCTCGCGTCATGAGTCCTGACAGCTTCCCATCTTCGTCGTCGCAGCACCGCAGTCACAAGGCTGGTTCCTCCAAGTCCAAAAGCAAGGATAAGAGTTCCAAGAAGGCGCGCATCGTGAAGTCATCCAAGCCCAAACAAAAGGCTCAAATTGGGTAAGACATTCTCCTCTAGCTGAAGGATGAATGACATTTAATTTTTGTTTGTTTGCATGGAGCGGAGGGAAGAGGCTTTTACAGATGTTTCTGTCATCTTCTGTGATGACTTTTTCAATTCATCCAAGACCATCTCTGTAACTTCACAGGCTTATTGTTAGCCATGCAGCTAATCACAGCAAGTTTAAAAGGTTTTACTGCTTACAGATGTGGTCTCGATGTGTTTTTGTGCATCAAAAACCAGATGAGAGTCAAACTCTCTTAAAGGGGCAGCGCTCCATCATCAGAGAGCTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21008
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000027807 Nonsense 1632 2948 22 38
Genomic Location (Zv9):
Chromosome 7 (position 37927935)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 36329536
GRCz11 7 36601013
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGAATTTGTAAGAGTCATTAAGAGCTTTTTAACTGTGATGCAGGCTTGT[C/A]GACTCCAGTACCCCGAGGCAGAAAAGGAAAGAAGATGAAGACTCAGTCAA
Long Flanking Sequence:
TGAGGGTGACTAAATAGTGAGTACATTTTGATTTTGGGGTGAACTATCCATTTGATATGTCATAATGTTAATAACAGAAGTAATTATGAAGCTCTTTTTAACTAATGTACAAATGTATTGGCTAGATCGATACAGGAAATGAGACTCCTCTTCACACTGATGATAGAATGATGAATCTATGTCTGTGGTCACAGATGGGGCCGCTGGAAGGACATCCTGGCTCACGGGCGCTTTAAGCGACAGCTAAGTGAGCGTGACGTGGAATGGATTTGCAGGGCACTCCTGTCATACTGCCTCGTTCATTACAGAGGAGACGACAAAATCAAGAGCTTCATGTGGGATCTGATCGCTCCCACAGAGGACGGCAGGACCAAGGAACTTCAGAACCATTTGGGTATGAGAAATGAGTGTTGTTTTAAAATACAGTTAGCAATTAATGTCCGGTTGTACATGAATTTGTAAGAGTCATTAAGAGCTTTTTAACTGTGATGCAGGCTTGT[C/A]GACTCCAGTACCCCGAGGCAGAAAAGGAAAGAAGATGAAGACTCAGTCAAGCTCCTTCGACATCCAGAAGGCAGAGTGGATCCGAAAACACAACCCAGAACACATGTTGTCTGATGACGGCTACAAGAAACACTTGAAGCACCACTGCAACAAGTGAGTATTGCATCACAAGTGCAATTTATCCTTCCAAAAGTTTGGGGTTGGTAAAAAATGTCTCTCACTCTTATCAAGACTAAATGGTACACTTAAAATGGTAATATTAAAAAAATTTAATTGCAATTTAGTTTAGTTGTTGTCTGTTTGGATATATTTTAAAATGCATGACAGCAGCCATCATTACAGTTTTTAGTGACATTATTAAAGGTTATGGTTTTTATCCTCTTCCATTATCTGCACTATGCTAAACTGCTTTGACAGTCTACGTTGTAAAAGCTCGACCAAAAAAAAGATGAATTTCATGGAACTGATAATTATTTTGTGATCATTCTAATTATCAGGGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15134
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000027807 Essential Splice Site 1806 2948 26 38
Genomic Location (Zv9):
Chromosome 7 (position 37934333)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 36335934
GRCz11 7 36607411
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACGACCCTGAGTATAAGYCTGCTCCTGCTTTGATGAAGGATGATATGGAG[G/A]TAGGCAAGTGGAAGAAGGAGAACTGGACCTGATAACACATGAGGCCATGC
Long Flanking Sequence:
TCCTTCAGTGAGATAGAGATCCGGGTTCCTGAGCTGGACCGTTCAGAGATGCCTGCGATGTGGTGGGACATGCTCTCGGACAAATGTCTGCTGTTAGGAGTTTATAAGCATGGTAAGTTTCATCAGCTCTCAGGTGATCTCAGATGTTCACACTCTTATTTAATGACCTAATGATGTCTGTGTGTTGTTGCAGGTTATGAGAAGTACAACACTATTCGTGCAGATCCAAAACTGTGTTTCCTGGACAGGGTTGGGCGGCCGGACGAAAAGGCCATCGCTGCAGAACAGAGAGGAAATGACTTTATAGATGGGTAGGAGACACAAACATGTGCTCCATTCATACAGATAGAGGAAGTCTTTTATCAGTTTGTGCCTGCAGAAGCTCAATGAGGTGTTTGTAACTGTGTTTGTTTGTGTGTGTGTGTGTTATCTGTGTGTGCAGGGATGTGGACGACCCTGAGTATAAGCCTGCTCCTGCTTTGATGAAGGATGATATGGAG[G/A]TAGGCAAGTGGAAGAAGGAGAACTGGACCTGATAACACATGAGGCCATGCTAAAGCTTATAGAAAATATAACCTGGTGTGTTGTGAGGAATGGGCAAATTTTAGCACTGGTTGTATTTATGTGTTGGAAAGCCTGCACCAGATAAGAAGTATAATTAAAAAACCATGAGTAGGACAGTAGTTTCAATTCAATGAATGCAGCCACAAAACAGAGGTGTGTTTTTCTGTGAAGCTGAACTTAGAATATTCTTTTTTCCAAAGTTAGATATGTTTTTTTTTGCTAATTTTATTCATTTATTTTGCCATGCAGAATCAGATAATGTAACAAACCAGGGGTTTTAGGCGGTGTGCAAAACACTTGATGTATGAGGGTCAGCTCTTTAATAGCTAGAAATGGTTTTCTCTGATTTGTATCTTAAATAATAATATAAATAGTTTATATAATAAAATGCATGCAATACATTTGACTACACCTATAACGGATTATACCATTTTGGATGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21009
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000027807 Nonsense 2652 2948 37 38
Genomic Location (Zv9):
Chromosome 7 (position 37943372)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 36344973
GRCz11 7 36616450
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGATTTAAGCCGGTTCCTGCAAGAGAACCCAGAGTATGGGGTTCCACCC[G/T]AGTGGGCCGATGTTGTCAAACAGTCTGTGAGTAAAAATAAAGACGTTTTC
Long Flanking Sequence:
TAGAGCATGAAACAAGAAAGGGTGCCATGTTTTTTGCTCAAGTCATTATTTTTAGACATTACAATACCAATGCCTTTAACTTTAATCAATATCTAAATCAATATTTAGTGGCGAAAAATATATACTATACAAATATATATAGTTTCAAGCAAGTCTGTGTGAATATACCTTTTATGTAAGTGTCTTTTCATAACATGTTTTACAGACTGCAAACAAGCTGCAATTTCAAGATGGCAGACCAAAACAGAAGAGACATCGCTGTAGAAACCCTAATAAAATCGACATCAACAGCCTGACAGGAGAAGAGAGAGTGCAGATCATCAACAGGCGAAATGCTCGCAAGGTGATTGTTGTAGATGTTGTGAACACACTTTATTGCTGTACTGGGGGTTGTTTGTAATGCTAGTTTTCCCTCCTTCTAGATTGGTGGTGCTTTTGCACCTCCTCTGAAAGATTTAAGCCGGTTCCTGCAAGAGAACCCAGAGTATGGGGTTCCACCC[G/T]AGTGGGCCGATGTTGTCAAACAGTCTGTGAGTAAAAATAAAGACGTTTTCCATTTCACATCCAGTTCATTAATAAAAATTGTGTGTGCAGTATACTGATATTATACTGTATTTAAAAAATGGCATGTTAGCCCAGTGGCTAGCACTGTTGTCTCGCATAAAGAAAAAAACCATTTCAAGCTCCCTCTTGGATGGTGGCCTTTCGTTAAGTTTACATTTCCTCCTGTGTCTCTGTGGGTTTACTTCAGGTACTGCGTTTCCTTTTCTTCCAGATTAATAAATGGACTAAGTCAAAAAGAAAATGAATGTATGAATGTTTTATAAGGCATGACTAGAATAGTATGTATTGCATTCATAAAGTATGTGAATAATTACTGATAAAACAAGAAATACATATTTAACTCTTGAGCCAGTGTTGAAAATGTTCATTTAACTCTGACCAGTGTGGATTTTATATACCCCAGTAAAGTGTTAAAATTAATGAATATATTAACCATAAAT
Associated Phenotype:
Not determined