ZMP
sema3d
Ensembl ID:
ZFIN ID:
Description:
Semaphorin-3D [Source:UniProtKB/Swiss-Prot;Acc:Q9W6G6]
Human Orthologue:
SEMA3D
Human Description:
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:HGNC
Mouse Orthologue:
Sema3d
Mouse Description:
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D Gene [Source:
Alleles
There are 9 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa36576 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa30702 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa19196 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa1661 | Nonsense | Available for shipment | Available now |
sa28980 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa43051 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa44882 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa15069 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa36576
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101192 | Nonsense | 11 | 291 | 2 | 8 |
ENSDART00000127469 | Nonsense | 11 | 766 | 2 | 18 |
Genomic Location (Zv9):
Chromosome 18 (position 8651036)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 9228414 |
GRCz11 | 18 | 9186433 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGAAATCTCCTCGTCCATCATGAAGACTGCAGGGGAGCCGGACAGACGG[A/T]GACAGAGGAGACAGGTCAGGACGGGACGGTTTTCATGTGCTTGGTGGTCT
Long Flanking Sequence:
ATGGCACTCTTTTGCCTAATGAAGCAGAGATTCAGACATGATCGTCGCCCCAGCCTCTCACAATTCAGAATACTGTTTGTTATTCAAGCAAGAATGGGAGACGTGGACAGAACAGACGAGGGATGGTGTGAGAAAATAAAAGAGAGGCATTTGAAAGAGGGCTGAAAGTGGCCGTCCTCATCAAGCTGACCTTTTGTTTAGAGACAAACAGATTTAGAAAGCATGCGTGTTGGTGGACAAAAGAATAGACTTGAATAGAGCAGCAGCTGATGCGGGGCTGCTAAAATGCATAGACATGCCTGAAAGAGACCACAGTAAAGCAGCTGAACATTCGTTTGGGATTTAATAAGACCTCAGACGCACACACACACACAAAAGCACACACCTCCCACAATGATGCTCTGACACTCCCTCTATCTAACTGTCCACTCCATCACAGGCCCACGGCTGCAGAAATCTCCTCGTCCATCATGAAGACTGCAGGGGAGCCGGACAGACGG[A/T]GACAGAGGAGACAGGTCAGGACGGGACGGTTTTCATGTGCTTGGTGGTCTACATCAGTGATGCTCTTCTTCTCTCTGCCTGAGGGGAACTGCATGAAGGAAAGTTTGCCAAGAGTTAAACTCGGCTACAAAGGTAAAGTTTATTTAACATTCCATTTAATCCCAAAGTTAAAGCTTTTCAAAATAATCTGTTCATTATTTGGTGTTTTGCCAAATTCTGCTGTATTTATTTGAAACATCTGCTGGTATGTTTGTCATTTTTAAAGGATACGTTTTGAAGTGCATGTTGGAGTGTGATGAGAGGTTTACAGCTCACTTGTATGAGGTCAATATTTAGACTGCACATCTGACTGATTGAGTGTACATAGGGGATGTGCGGCATATCAGTAGCAGTACGCAAGCTTTGTGTTGTATTTACTTCCAGGACACATACTTGGATGGACTGGATGATAATATATGATGTAAATATGTTTTGATTATAATTTAAGATGATTTTAGTCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30702
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101192 | Nonsense | 15 | 291 | 2 | 8 |
ENSDART00000127469 | Nonsense | 15 | 766 | 2 | 18 |
Genomic Location (Zv9):
Chromosome 18 (position 8651048)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 9228426 |
GRCz11 | 18 | 9186445 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGTCCATCATGAAGACTGCAGGGGAGCCGGACAGACGGAGACAGAGGAGA[C/T]AGGTCAGGACGGGACGGTTTTCATGTGCTTGGTGGTCTACATCAGTGATG
Long Flanking Sequence:
TGCCTAATGAAGCAGAGATTCAGACATGATCGTCGCCCCAGCCTCTCACAATTCAGAATACTGTTTGTTATTCAAGCAAGAATGGGAGACGTGGACAGAACAGACGAGGGATGGTGTGAGAAAATAAAAGAGAGGCATTTGAAAGAGGGCTGAAAGTGGCCGTCCTCATCAAGCTGACCTTTTGTTTAGAGACAAACAGATTTAGAAAGCATGCGTGTTGGTGGACAAAAGAATAGACTTGAATAGAGCAGCAGCTGATGCGGGGCTGCTAAAATGCATAGACATGCCTGAAAGAGACCACAGTAAAGCAGCTGAACATTCGTTTGGGATTTAATAAGACCTCAGACGCACACACACACACAAAAGCACACACCTCCCACAATGATGCTCTGACACTCCCTCTATCTAACTGTCCACTCCATCACAGGCCCACGGCTGCAGAAATCTCCTCGTCCATCATGAAGACTGCAGGGGAGCCGGACAGACGGAGACAGAGGAGA[C/T]AGGTCAGGACGGGACGGTTTTCATGTGCTTGGTGGTCTACATCAGTGATGCTCTTCTTCTCTCTGCCTGAGGGGAACTGCATGAAGGAAAGTTTGCCAAGAGTTAAACTCGGCTACAAAGGTAAAGTTTATTTAACATTCCATTTAATCCCAAAGTTAAAGCTTTTCAAAATAATCTGTTCATTATTTGGTGTTTTGCCAAATTCTGCTGTATTTATTTGAAACATCTGCTGGTATGTTTGTCATTTTTAAAGGATACGTTTTGAAGTGCATGTTGGAGTGTGATGAGAGGTTTACAGCTCACTTGTATGAGGTCAATATTTAGACTGCACATCTGACTGATTGAGTGTACATAGGGGATGTGCGGCATATCAGTAGCAGTACGCAAGCTTTGTGTTGTATTTACTTCCAGGACACATACTTGGATGGACTGGATGATAATATATGATGTAAATATGTTTTGATTATAATTTAAGATGATTTTAGTCACTGTAAAGCTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa19196
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101192 | Nonsense | 41 | 291 | 2 | 8 |
ENSDART00000127469 | Nonsense | 41 | 766 | 2 | 18 |
Genomic Location (Zv9):
Chromosome 18 (position 8651128)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 9228506 |
GRCz11 | 18 | 9186525 |
KASP Assay ID:
2261-1870.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGTGGTCTACATCAGTGATGCTCTTCTTCTCTCTGCCTGAGGGGAACTG[C/A]ATGAAGGAAAGTTTGCCAAGAGTTAAACTCGGCTACAAAGGTAAAGTTTA
Long Flanking Sequence:
AATGGGAGACGTGGACAGAACAGACGAGGGATGGTGTGAGAAAATAAAAGAGAGGCATTTGAAAGAGGGCTGAAAGTGGCCGTCCTCATCAAGCTGACCTTTTGTTTAGAGACAAACAGATTTAGAAAGCATGCGTGTTGGTGGACAAAAGAATAGACTTGAATAGAGCAGCAGCTGATGCGGGGCTGCTAAAATGCATAGACATGCCTGAAAGAGACCACAGTAAAGCAGCTGAACATTCGTTTGGGATTTAATAAGACCTCAGACGCACACACACACACAAAAGCACACACCTCCCACAATGATGCTCTGACACTCCCTCTATCTAACTGTCCACTCCATCACAGGCCCACGGCTGCAGAAATCTCCTCGTCCATCATGAAGACTGCAGGGGAGCCGGACAGACGGAGACAGAGGAGACAGGTCAGGACGGGACGGTTTTCATGTGCTTGGTGGTCTACATCAGTGATGCTCTTCTTCTCTCTGCCTGAGGGGAACTG[C/A]ATGAAGGAAAGTTTGCCAAGAGTTAAACTCGGCTACAAAGGTAAAGTTTATTTAACATTCCATTTAATCCCAAAGTTAAAGCTTTTCAAAATAATCTGTTCATTATTTGGTGTTTTGCCAAATTCTGCTGTATTTATTTGAAACATCTGCTGGTATGTTTGTCATTTTTAAAGGATACGTTTTGAAGTGCATGTTGGAGTGTGATGAGAGGTTTACAGCTCACTTGTATGAGGTCAATATTTAGACTGCACATCTGACTGATTGAGTGTACATAGGGGATGTGCGGCATATCAGTAGCAGTACGCAAGCTTTGTGTTGTATTTACTTCCAGGACACATACTTGGATGGACTGGATGATAATATATGATGTAAATATGTTTTGATTATAATTTAAGATGATTTTAGTCACTGTAAAGCTTTAGAATTCCTTGAAATAATAATGTTTGTGTATATCCTAAAAATACAGTATGTTTGTATTTTGCATTTGGACACTGTCTGGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1661
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101192 | Nonsense | 257 | 291 | 8 | 8 |
ENSDART00000127469 | Nonsense | 257 | 766 | 8 | 18 |
Genomic Location (Zv9):
Chromosome 18 (position 8677228)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 9254606 |
GRCz11 | 18 | 9212625 |
KASP Assay ID:
554-1608.1 (used for ordering genotyping assays)
KASP Sequence:
ATCCCTACAGAGGGCAAGTTCATTTCTGCCCATCCCATCTCAGACACCTA[C/A]AATCCTGACGATGACAAGATTTACTTCTTTTTCCGTGAGGCTTCTCGTGA
Long Flanking Sequence:
AAAGAACCAAAAGGCAGCCGTTCTGGCATGTAACTCACATTTTCAAAGCTGAATTTCTGACTTAGTATTGTTTTTCAGGTAAACAAGAATATTCACTCAGCATGTTTCTTAACAACTGCAAACATATTATGGTATTTGTATGCTTTAGAAGAGTAAAAAACTTACATACAACACCTTTAAGCCTAGTTTTACTAACAGCCAGTGCAAAAGTTTAGTTTATTTAGGTTTTTAGGCATGGACTCAGTTGTTTTTGCAGCAGACCTTATAACATTTGCATTTATGTTAAAGGTACTCTTACTAAAGTATAGTTTATGGGAGAAGATTAATTTAAGTTTGCATTTACTGGTAACAATTTTAATAAGCGTCCACACTTTCTTACAAGATTATAAAGGGATTGGTTGGATTACCATCACAGATATAAATTAAATCTGATCAGCTTTTGTCTCTCTTATCCCTACAGAGGGCAAGTTCATTTCTGCCCATCCCATCTCAGACACCTA[C/A]AATCCTGACGATGACAAGATTTACTTCTTTTTCCGTGAGGCTTCTCGTGATGGGAGCACTACAGACAAGAGCGTGCTGTCTCGTGTCGCCCGGATCTGCAGGGTAAGGCCCGTCCTCACGCTGCCTGATCACAGAGAAACTCACCTCATCTCTCTGATCCTCCTCAGAACTGAAGATTAAATGTGCTTCCTCTGGGGGGAGAGGCTTCCTGGTACGTTTCCCTTGATGTGATCTGCTGAAAGAGGACCAAACCACTGTCAGGCTGGGTAAATCAAAGTAGAGGTCTGGCCATGTAATTGCTGCCTGGACTGTCATTCCTGATCAGATGATCAGAGTCCCTTGGGTTGAGAAATTAATGTGTTAAGTGACTCCATTGTGTTAACACACAGCTTAAAGGGATAGTTCAAAATATGACAATTTAAACACTATTTACTTCCTCAAGTGGTATAATTTTCTTATTTTCTTAATACAAGATTTTTTTTTTTTTAAAAGAAAGCTGA
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa28980
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101192 | None | 291 | 291 | 8 | 8 |
ENSDART00000127469 | Essential Splice Site | 291 | 766 | 8 | 18 |
Genomic Location (Zv9):
Chromosome 18 (position 8677331)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 9254709 |
GRCz11 | 18 | 9212728 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGAGCACTACAGACAAGAGCGTGCTGTCTCGTGTCGCCCGGATCTGCAGG[G/A]TAAGGCCCGTCCTCACGCTGCCTGATCACAGAGAAACTCACCTCATCTCT
Long Flanking Sequence:
GTTTCTTAACAACTGCAAACATATTATGGTATTTGTATGCTTTAGAAGAGTAAAAAACTTACATACAACACCTTTAAGCCTAGTTTTACTAACAGCCAGTGCAAAAGTTTAGTTTATTTAGGTTTTTAGGCATGGACTCAGTTGTTTTTGCAGCAGACCTTATAACATTTGCATTTATGTTAAAGGTACTCTTACTAAAGTATAGTTTATGGGAGAAGATTAATTTAAGTTTGCATTTACTGGTAACAATTTTAATAAGCGTCCACACTTTCTTACAAGATTATAAAGGGATTGGTTGGATTACCATCACAGATATAAATTAAATCTGATCAGCTTTTGTCTCTCTTATCCCTACAGAGGGCAAGTTCATTTCTGCCCATCCCATCTCAGACACCTACAATCCTGACGATGACAAGATTTACTTCTTTTTCCGTGAGGCTTCTCGTGATGGGAGCACTACAGACAAGAGCGTGCTGTCTCGTGTCGCCCGGATCTGCAGG[G/A]TAAGGCCCGTCCTCACGCTGCCTGATCACAGAGAAACTCACCTCATCTCTCTGATCCTCCTCAGAACTGAAGATTAAATGTGCTTCCTCTGGGGGGAGAGGCTTCCTGGTACGTTTCCCTTGATGTGATCTGCTGAAAGAGGACCAAACCACTGTCAGGCTGGGTAAATCAAAGTAGAGGTCTGGCCATGTAATTGCTGCCTGGACTGTCATTCCTGATCAGATGATCAGAGTCCCTTGGGTTGAGAAATTAATGTGTTAAGTGACTCCATTGTGTTAACACACAGCTTAAAGGGATAGTTCAAAATATGACAATTTAAACACTATTTACTTCCTCAAGTGGTATAATTTTCTTATTTTCTTAATACAAGATTTTTTTTTTTTTAAAAGAAAGCTGATATCCTGTAACCATTGACATCCATAGTAGAAATATACTATGGAAGTTAATGGTTACAGGTTTCCAACATTTTTTAAAATATCATTTTTTCAATATCAATAGGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43051
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101192 | None | None | 291 | None | 8 |
ENSDART00000127469 | Nonsense | 318 | 766 | 9 | 18 |
Genomic Location (Zv9):
Chromosome 18 (position 8680960)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 9258338 |
GRCz11 | 18 | 9216357 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTAACAAGTGGACAACATTTCTCAAAGCGAGACTCGTGTGCTCCATTCCT[G/T]GACCAGATGGAGTGGACACACACTTTGATGAGCTCCGTGAGTGATGTGTT
Long Flanking Sequence:
TGGCAGTAATGAGGAGATCTGTTTAAGTGTTCTCAGCATGTCTTCTCTTTCTGAGACCTTTCAGTGATCTTTTGTGCATCTAAATACGTAAAACCTGCTCATGGAGAGGGTCATTATATTCTCTTTATAAACTCTCCTTGCTCGCTTTTCTCCATTTCTTGAACAGTCTTTCTTTGTCTCTCGTGTGTGCATTTGTGCTCCTCTTTAGCCTTTGTGTTACTGAAGGGCTTGTGGTTTGCTGTCGTCTTATGCTTAATTGAATAAGCTGCTTTAATCAGAAGCAAATGCTGGGTTTACATTTTATTATGAAAGTCTATAAAATATATAATAACTGAGGATTTAAATGATAAACACATGCTTTCGGAATGACTTCACTGAAATGTCCTATATTTGCGTGTGTCTGTGTGTGTTTTTGCATGAAGAACGATGTTGGAGGTTTGAGAAGTCTTACTAACAAGTGGACAACATTTCTCAAAGCGAGACTCGTGTGCTCCATTCCT[G/T]GACCAGATGGAGTGGACACACACTTTGATGAGCTCCGTGAGTGATGTGTTTTATGTTACTTCTCCCTCCCACAAACGCATATTTTAGATTTATCAGACTTTTTAAAATGTGTGTATGTGTGTGTGTGTTACAGAGGACATCTTTCTTCTCCCTAGCAGAGATGAGAAAAACCCTATGGTGTATGGAGTGTTCACCACTACCAGGTTAGTGTGTCCAACGCAAGCTCACGGCAATTCGTAACTTTTTGATTCAGTGGTTATTTCGTATGAATTCGTACGATATAGTTTGTACAATTTAGTACGATTTGCTCATCATCCAATGACAGTTGGGGTTAGGGGTGGGGTTGGGTGTCACGACCTCCTTTCTAAAAACGGATATTTTCGTACGACTGAACTAAACTGACAAAACGTAAAATACTTACGTTTTCTTGTAAGATCAGGCTGGTGTATCAGTATTTTTATCTTGGTACTGAAGCTTGAAAAGCAACCCAAAATACAGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44882
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101192 | None | None | 291 | None | 8 |
ENSDART00000127469 | Nonsense | 597 | 766 | 17 | 18 |
Genomic Location (Zv9):
Chromosome 18 (position 8693646)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 9271024 |
GRCz11 | 18 | 9229043 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTCTTTTTGATATGCTGATCGCTCCCTCTCTCTTTCGCTTTTGCAGTGT[T/A]AGGGAGGAATGTCGAGGAGAAGGTGTTGTACGGAGTGGAGAGTAACTCCT
Long Flanking Sequence:
GTAATGTTATTGATCAATTCTAAAATGTAATCAAGGTTAATCTGATGCATGCTCAATTAAAGGCTTTCTGATGTGTGCTTACAGAAGGGCCAGAAGGCAGGACATCAAACATGGAGACCCATCCAGCCATTGTTGGGACACAGAGGATGGTAAGAAAGCATATGAGGGCGTACAGTCTGTGTGTGTGTGTGTGTGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTGCGCAGCATAAAAGCACTAAAAGCTCTGTTTTGTTTTAAGATGCTGCATTGTCCTGTGGGGCTCACCTAATGGACCTCAATGTTAACCCAAAAAAATGTCTTTTTGATATGCTGATCGCTCCCTCTCTCTTTCGCTTTTGCAGTGT[T/A]AGGGAGGAATGTCGAGGAGAAGGTGTTGTACGGAGTGGAGAGTAACTCCTCTTTTCTTGAGTGCGTTTCGAAATCCCAGCAGGCCTTGATCCGCTGGTTTGTACTGAAGCCAGGAGTGGACCACCGTCAAGAGGTATCAGTAACCTAGAGTACATCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTGTGCGTGTGTGTTTTTTGTTCACCTACTTTGTAGCTACACTGAAAAAATATTCATTGGATTTACTAGATTTTTTAAGGTAACTGGTTGCAAACAATTCAACACAGGGTCATTCTGAAAACGTAGCCCTATATACATTTCTGGAGGTCGCAAATTATGTAGTCAGAAGTACGTGTGGCTGCATTTCATCTTTCATCTTCCTTTTCATGCTTACCAGCTGACCACTTACCTCCATGTGGACAGCTTTCCCGTTGTTACCAGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15069
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101192 | None | None | 291 | None | 8 |
ENSDART00000127469 | Essential Splice Site | 641 | 766 | 17 | 18 |
Genomic Location (Zv9):
Chromosome 18 (position 8693781)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 9271159 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTTGAWCCGCTGGTTTGTACTGAAGCCAGGAGTGGACCACCGTCAAGAGG[T/C]ATCAGTAACCTAGAGTRYATCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Long Flanking Sequence:
GGACACAGAGGATGGTAAGAAAGCATATGAGGGCGTACAGTCTGTGTGTGTGTGTGTGTGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTGCGCAGCATAAAAGCACTAAAAGCTCTGTTTTGTTTTAAGATGCTGCATTGTCCTGTGGGGCTCACCTAATGGACCTCAATGTTAACCCAAAAAAATGTCTTTTTGATATGCTGATCGCTCCCTCTCTCTTTCGCTTTTGCAGTGTTAGGGAGGAATGTCGAGGAGAAGGTGTTGTACGGAGTGGAGAGTAACTCCTCTTTTCTTGAGTGCGTTTCGAAATCCCAGCAGGCCTTGATCCGCTGGTTTGTACTGAAGCCAGGAGTGGACCACCGTCAAGAGG[T/C]ATCAGTAACCTAGAGTACATCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTGTGCGTGTGTGTTTTTTGTTCACCTACTTTGTAGCTACACTGAAAAAATATTCATTGGATTTACTAGATTTTTTAAGGTAACTGGTTGCAAACAATTCAACACAGGGTCATTCTGAAAACGTAGCCCTATATACATTTCTGGAGGTCGCAAATTATGTAGTCAGAAGTACGTGTGGCTGCATTTCATCTTTCATCTTCCTTTTCATGCTTACCAGCTGACCACTTACCTCCATGTGGACAGCTTTCCCGTTGTTACCAGTTTGTCCAGTGGTTTGCACCATACGTTGGCCCCAAGACCCCGACAATGGGGTTCAAGTCTGATGAAGGTTGGTTCCAAAAAGCAGGTAAAACAAAAACAAAAGGCAAAAAATAAAATAAATAAGTAAATAACAGTGT
Associated Phenotype:
Not determined