Busch Lab

ZMP

si:ch211-197k23.5

Ensembl ID:
ENSDARG00000062137
ZFIN ID:
ZDB-GENE-030131-1393
Human Orthologue:
STAG1
Human Description:
stromal antigen 1 [Source:HGNC Symbol;Acc:11354]
Mouse Orthologue:
Stag1
Mouse Description:
stromal antigen 1 Gene [Source:MGI Symbol;Acc:MGI:1098658]

Alleles

There are 8 alleles of this gene:

Allele Name Consequence Status Availability
sa37909 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa24517 Nonsense Available for shipment Available now
sa14968 Nonsense Available for shipment Available now
sa24516 Nonsense Available for shipment Available now
sa37908 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa37909
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089376 Essential Splice Site 96 1256 4 33
ENSDART00000142864 Essential Splice Site 96 1256 5 34
Genomic Location (Zv9):
Chromosome 24 (position 27850670)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 26901257
GRCz11 24 26980416
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGAGGTTGTGTGCTGCTTTGTGACTGTTGTTTCGCTTTGCAAATGTTTCC[A/T]GTCGGTCATTGATGATTGGATTGAATCCTACAAGCAAGATCGAGACCTGG
Long Flanking Sequence:
TGATATTCAAATTGAAGTGTTTTCACACACACAAGTTTCAAAACTTTCTCTCTGTGCATTGCTCTGTGTAGGGATTCGTCAAATGACGGTCAAGGTGACACCATCAGTCTGGCCATGAGCGTCAGTGAGCTGGATGATCCTGAGGTTGGAAAAGGCAAGAAAAAGAGAGGCAGGCCTGGAAAACAAGGAGTAAGAGCATCATTTATAATCAGACAAACTGTTTATTTGAACCTTAAATACATGCACTCATCCTAATTCCCTTTTCTCTTCCCCCAGGCGGCTAATAAGAAGGCCAGAAGGTCTCCGGTTGATAAAGGCGGGAGGAGGCCGAATGGAGTGGCCCATCAGAATGGAGAGGGCACAGACCCTAGCACTCTGTTTGAGGTGGTCAAACAAGGCAAAAGTGCCATGCAGGTGAAACATATGTCTTTTTTTGTACTTCTGTCTATTCGAGGTTGTGTGCTGCTTTGTGACTGTTGTTTCGCTTTGCAAATGTTTCC[A/T]GTCGGTCATTGATGATTGGATTGAATCCTACAAGCAAGATCGAGACCTGGCTCTGTTGGATCTGATCAACTTCTTCATTCATTGTTCTGGCTGCAAAGGTCAGTTTTGTTTTCTATTTCCTTATACCAGCGTTTCTCGACCACGTTCCCGGAGGACCACCAACACTGCATGTTTTGGATGTCTTCATTGTCTGTCACACCCATTACAGGTCTTTCGGTCTCTGTTATTGAGCTAATGATCTGAATCAGGTGTGTTTGGTTAAGGAGACATAGATTTGTGCAGATTTGTGGTCCTCCAGGAACGTGGTTGAGAAACACTGCGCTATACTGTTCCAAATTAATTGCACTTTTCAGTCGTCATTAATCAAATTAGGGTTGGAAAAGATCAAATAATTATACTGGATACATTAACATTCTCAAATAAGGGGTTCTGTTTACTGACAGAACCAAACCCTACACATTCATACATTATTATTAACTGCAGTATTCAAATAATTAGGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24517
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089376 Nonsense 139 1256 5 33
ENSDART00000142864 Nonsense 139 1256 6 34
Genomic Location (Zv9):
Chromosome 24 (position 27848257)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 26898844
GRCz11 24 26978003
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATGTCTTATTATCACAGGCACTGTACGGATCGAGATGTTCAGGAACATG[C/T]AGAATGCTGAAATAATCAGGAAAATGACAGAAGAGTTTGATGAGGTTTGT
Long Flanking Sequence:
GTCAAGAAAGAGGTCTAACTCTGTGCCACTGCATAGCTATAGATGTGTTAAAAATAATGAGAATATATATATATATATCATCGATTAATGATATTAATCGATTAATCGACATCGATTAACGATTAATGATGAATTTTATATATATATATATATATATATATATATATTCGAGTCCTAATCGGGAAGTAACGTCCAATTCCAATCGAGTCTGAAACCGTGTGATCAAGCCCAATATCCGATCAAGTGACATCCCTATTAAATAGCACAAATTTGGATATTAAAAATGCAGAAAATGTTCAGTTATGATTAATAAATGCAGCACAGTTATTGTTTATTTTTATTTAATGCTAGTAAACGCATTAACCAAAATAACTTTATTGTAAAGTGTGACCTAATTTCTCATTTAAAATAAATGCTATTAATGAACATTGTCAATCACATTAACACACCAATGTCTTATTATCACAGGCACTGTACGGATCGAGATGTTCAGGAACATG[C/T]AGAATGCTGAAATAATCAGGAAAATGACAGAAGAGTTTGATGAGGTTTGTTTATTATTATCTTCTCACTGACTAAATACCTAAATTCTCTGTTAATTATTATTTCTAATTGTCTAATCCAGGACAGCGGTGATTACCCTCTCACGATGACAGGACCTCAGTGGAAGAAGTTCCGCTATAACTTTTGCGAGTTCATCATGGTTCTGATCCGTCAGTGTCAATACAGCATCATCTACGATGAGTACATGATGGACACGGTCATTTCTCTGCTCACTGGACTTTCAGACTCTCAGGTCCGAGCCTTCAGACACACCAGCACACTGGCAGGTCGGTGCCTTTTTCTTGGAATTTACAATGTCATGAACCTTCCTGTTTTTTCAGTCATGCGATTTTAAATGAGGTGTTGCCAGATGTGAAAGGGTGAAAAGATAAAGTGTGGAAAAATGGGGAGGTTCGTTACTATCTACATCAGGGGTCACCAACATGGTGCCCACGGGTGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14968
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089376 Nonsense 327 1256 9 33
ENSDART00000142864 Nonsense 327 1256 10 34
Genomic Location (Zv9):
Chromosome 24 (position 27842867)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 26893454
GRCz11 24 26972613
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTGGTGTTTGGATGAAGTTGTACAGTGATGCTTTTCTTAATGACAGTTA[T/A]CTAAAGTACGTGGGTTGGACACTACATGACAGAGYAAGTGTTNNATTCATAA
Long Flanking Sequence:
ATTATTATTAGCCCCCTTATTTTTTGATTGTCTAAAGAACAAACCTTCAATACACATTGATTACCCTAACTTGCTCAATCTAGATACGACTTTAATGTCACTAAGCTAAATAGTATCTTGAAAAATATTTAGTAAAATAATATGTACTGTCATCATGGCAAAGATAAAAATAAATAAGTTATTAGAAATGTGCTGAAAAAATCTTCTTCGTGTTAAACAGAAATTGGGGAAAAATATACAGGGGGCTAATAATTCAAGAGGGTTAATAATTCTGACTTCAGTTGTAAAATGAAACCGATTAAAAAATAAATAAATAAATAAAAATCTTTTTTAAATAGTCACAAACCTAGTCATTATATTGAAGTTTTTCCTCTGGGTTTGATGTCGTTTTCTTTAAAAATGTTTTTCAGGGATGCCATTGCAGAAATCCGAGCTATTTGTATAGAGGAGATTGGTGTTTGGATGAAGTTGTACAGTGATGCTTTTCTTAATGACAGTTA[T/A]CTAAAGTACGTGGGTTGGACACTACATGACAGAGTAAGTGTTATTCATAAGTTATTATCACACACAACAAATGTAATATTGTTGGTCTTGGTTAATAAAATGGTGTAAAATGTAATCATTACAGCAAGGTGAAGTTCGACTCAAGTGTCTAAAAGCCCTTCAGACTCTCTACACCAACAGAGAACTTTACCCCAAACTTGAGCTCTTCACCAATCGATTTAAGGTGACACGTGAACTATTTTTAATAATTTGGTTCCATATCATTTCTGTCATTTTCAAATGGACTCATTGTGATGCTGTTTAATTTCTCTCAGGACCGTATTGTGTCCATGACGCTGGATAAAGAGTATGATGTGGCTGTTGAAGCCATAAGACTAGTCACTTTGATTTTGCAGTAAGTATTATACTCACAATTTCTATTTTCTTGTTCTGACTATTTATTTTTTATGTGAGTATTATATATATATATAGACACGTATGTCAAAACAAACTTAATTTGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24516
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089376 Nonsense 752 1256 21 33
ENSDART00000142864 Nonsense 752 1256 22 34
Genomic Location (Zv9):
Chromosome 24 (position 27835319)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 26885906
GRCz11 24 26965065
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCTCTCATTACTCCATCCTGTGGCAGCTGGTGAAAATCACTGAAGGATG[T/A]CCATCAAAGGTACGGTACACACCAATAAATGCAGATGACAAAAATAGTCC
Long Flanking Sequence:
GTTTGCAAGTTCTCCCTGCATTCGTGTGGGTTTCCTCCGGGTGCTCCGGTTTTCCCCACATGCCAAAGACATGCGGTACAGGTGAATTGGGTAGGCTAAATTGTCAGTAGTGGATGAGTTAGAATGAGTGTGCGTGGATGTTTCCCAGAGATGGGTTGCGGCATGAAGGGCATCCGCTGCATAAAAACATGATAAGTTGCCGGTTCATTCCGCTGTGGCAACCCCGGATTAATAAATGAATAAATGGTCCTGTGTAAATAATAAAATAAAAATTGTAGGTGTGTTTCTACTAAAATTGTAAGCGGCACAACAATTTTTAAGATTGATAATAATCGGAAATAGTTTTCAGCTCCAAATCAGCATAATAAAATGGTTTCTGACGCATGATGTGACATTTGAATAATTTCTTGTTTATTGTCTTGTGGTCAGATCGCTGTCCAGGCTCTTCAGTGCTCTCATTACTCCATCCTGTGGCAGCTGGTGAAAATCACTGAAGGATG[T/A]CCATCAAAGGTACGGTACACACCAATAAATGCAGATGACAAAAATAGTCCAGAAGTCTTTTTTTTCCTTCTTTGCAAATCATGCATTTCATACATTTCAGGATGATCTTCTGGCATTAAGAAGAGTGGTTAAGTCTTTTCTAGCAGTTTGCCAACAGTGCCTGTCTAATGTGAACACTCCAGTCAAAGAGCAGGTAAAATATACATCCTACAGTTCTGTTTTTTTGTTATGTTATAGATCTTAAATTGTATATGTAAATGTTCCAGCATGTATTTTAAGTCAGTCCGTTTTATATTCACAGGCGTTCATGTTGCTGTGTGACCTCCTGATGATCTTCAGTCATCAATTGGTCTCAGGCGGTCGAGAAGGTTTGCAGCCGCTGGTTTTTAATCCTGATGGCTCTTTGCAGAATGAACTGCTCAACTTTGTCCTGGATCACGTTTTTATCGACCAGGATGATGAGAATCAGAGCATGGGTGCGTGTCTGCTTTGATAGAGAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37908
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089376 Essential Splice Site 1222 1256 31 33
ENSDART00000142864 Essential Splice Site 1222 1256 32 34
Genomic Location (Zv9):
Chromosome 24 (position 27822592)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 26873179
GRCz11 24 26952338
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTAGAGGACATGAACGAGGAGTTTGAGGATACTATGGTCATAGATCTGG[T/A]AAGAGTTCACATATGTGACGAGTCCTTCAGTGTATTTTTGATGTTTCTGC
Long Flanking Sequence:
ATTATAATGGTGTTAAAAAGTTTTAAATTTGATTTGAATAAACCTGCAGAAACCCTGTTGAATATTCCTATCTATTTCCCAGTAAATATAAACAATATATTTTGGTTTGATTTATGTTCATTAAAGAAACTGTCTGGTCACCTAACATCTTTGGGAATAGTCAGGTAATTCATGCAGATTAATTGAGGGATTAAGCAGAAAAGAAAATGAAAGAATGAATGACTAATATATACTTTTAAAAAATCAATTTACATAATTTATTAACCTTACTAACCTTATAAAACGTATTAACCTAACTCTTAATAAACAAATAATGCTTTATCACAAAACTAAAGCTGAGAGATTGAATCTATCAGAATATTAATTAAACCTGATGCCTTTCAGGCGAGGCCTAATGGAGGATGATGCTGAGCCCATCTTTGAGGACGTGATGATGTCATCGCGCGGTCAACTAGAGGACATGAACGAGGAGTTTGAGGATACTATGGTCATAGATCTGG[T/A]AAGAGTTCACATATGTGACGAGTCCTTCAGTGTATTTTTGATGTTTCTGCTGGTGATCAGGAATCGCAACATCTATTCATCAGTTAAATTACTTTAACTTTGATCTTACCTTACAATTCACATTTCAGCCGGCGTCGAGAAACCGAAGAGAAAGAGCCGAACTCAGACCAGACTTTTTTGACTCTACAGCCATAATGGAAGACGATCCTGTAAGTACACAAGAGGAATTTGATTAGCTATAACTCGTTTTGAAGGGCACCCATGATGAAAATCACCTTTTGGAAGCTGTTTGGACAGATCTGTCTGTAGGTAAAGTGTGTCCACGGTCAAATTGGAGTGATAGAAACACAATAAGTCTCTCTTTTTTTTTTTATTTCCTTATGTTAAAATAGGATCCAAATCCCTCATATTTGAGGCCTACCACAACGTGACGTTGGAGTGTGGTTTTTCCGCCCACTGAATTGATTAACAGACGTGTATTAACATCTCTCCGTAGTAAC
Associated Phenotype:
Not determined