ZMP

lbx1a

Ensembl ID:

ENSDARG00000018321

ZFIN ID:

ZDB-GENE-040724-40

Description:

transcription factor LBX1 [Source:RefSeq peptide;Acc:NP_001020703]

Human Orthologue:

LBX1

Human Description:

ladybird homeobox 1 [Source:HGNC Symbol;Acc:16960]

Mouse Orthologue:

Lbx1

Mouse Description:

ladybird homeobox homolog 1 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:104867]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa1496	Nonsense	Available for shipment	Available now
hu3569	Nonsense	Confirmed mutation in F2 line	Not yet available

Mutation Details

Allele Name:

sa1496

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000045351	Nonsense	136	269	2	2

Genomic Location (Zv9):

Chromosome 13 (position 28529941)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	28175889
GRCz11	13	28306339

KASP Assay ID:

554-1421.1 (used for ordering genotyping assays)

KASP Sequence:

GGAATACCCCTAAAAAACGGAGAAAGTCGAGAACAGCTTTCACCAATCAC[C/T]AAATCTACGAACTTGAGAAGAGATTTCTCTATCAGAAATATCTGTCTCCG

Long Flanking Sequence:

AATAATGTTTACCTGTTAGAATAAAAAAGATAATGTACCAAATAAATTAGTAATCATAAATAAAATAATGCTATCTATGCAATTAAAGATAGTTAAATATGCAGAATTGTAAAATAAATAGCACCAAATAAATGAATAAAAGGTAATAAAATGGATTAGCTCTGTTCATGTGCAATTATAATAAATGTTTAAAATATGTTAAATATCCATGTGCAGAATTAAAATGCTAAAAATAAATAAAAGTAGTTTTGCAGGCCTGTTATGTTTTTCGACCTGAAGCTAAATTGATAAACACTCATGAAGACGTCATAATTTAAAAATCATAACAGAATATTTCTATTTATAGCAATGATAAATTTTACAGGCCTCTGCTGTTCTGCGTTTTAATGTGGCTGCATTATTTTTGTTTGTTAATTTTAGGGAGAGACGGCATGACACTCTTCGGTCAGAGGAATACCCCTAAAAAACGGAGAAAGTCGAGAACAGCTTTCACCAATCAC[C/T]AAATCTACGAACTTGAGAAGAGATTTCTCTATCAGAAATATCTGTCTCCGGCTGATCGAGATCAGATCGCTCAGCAGCTCGGGCTCACGAATGCTCAAGTCATCACCTGGTTCCAGAATCGCCGAGCCAAACTCAAAAGAGACCTAGAGGAGATGAAGGCGGACGTGGAGTCGGCCAAAGCGGTGGGCAATGTACCTTTTGAGAAAATGGCCAAACTGGCAGACCTAGAGAAACGTGTGAACGGTACACTCGGAGATTCATCGGCCGTGTCTCCGTCACGATCTAATCACGAGCACGAGGGCACCAACAAACTCCACATGTCACCATCATCGCCATATACAGACCACACAACGAGCAAAGAGTGTTCAGAAGACGAAGACGAGGAAATTGATGTAGATGACTGATTTTTTTTCTTGAACAGAATCGGTATTATTTATATACCTTTTTTTCAGAGATGGTCCTCGGAAACCACAGAGGTGAAAGTGCCATTAAAGCACCAA

Associated Phenotype:

Normal

Stage	Entity	Quality	Tag
Larval:Day 5 ZFS:0000037	whole organism ZFA:0001094	quality PATO:0000001	normal PATO:0000461

Mutation Details

Allele Name:

hu3569

Status:

Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000045351	Nonsense	174	269	2	2

Genomic Location (Zv9):

Chromosome 13 (position 28529827)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	28175775
GRCz11	13	28306225

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGATCGCTCAGCAGCTCGGGCTCACGAATGCTCAAGTCATCACCTGGTTC[C/T]AGAATCGCCGAGCCAAACTCAAAAGAGACCTAGAGGAGATGAAGGCGGAC

Long Flanking Sequence:

TAAATAGCACCAAATAAATGAATAAAAGGTAATAAAATGGATTAGCTCTGTTCATGTGCAATTATAATAAATGTTTAAAATATGTTAAATATCCATGTGCAGAATTAAAATGCTAAAAATAAATAAAAGTAGTTTTGCAGGCCTGTTATGTTTTTCGACCTGAAGCTAAATTGATAAACACTCATGAAGACGTCATAATTTAAAAATCATAACAGAATATTTCTATTTATAGCAATGATAAATTTTACAGGCCTCTGCTGTTCTGCGTTTTAATGTGGCTGCATTATTTTTGTTTGTTAATTTTAGGGAGAGACGGCATGACACTCTTCGGTCAGAGGAATACCCCTAAAAAACGGAGAAAGTCGAGAACAGCTTTCACCAATCACCAAATCTACGAACTTGAGAAGAGATTTCTCTATCAGAAATATCTGTCTCCGGCTGATCGAGATCAGATCGCTCAGCAGCTCGGGCTCACGAATGCTCAAGTCATCACCTGGTTC[C/T]AGAATCGCCGAGCCAAACTCAAAAGAGACCTAGAGGAGATGAAGGCGGACGTGGAGTCGGCCAAAGCGGTGGGCAATGTACCTTTTGAGAAAATGGCCAAACTGGCAGACCTAGAGAAACGTGTGAACGGTACACTCGGAGATTCATCGGCCGTGTCTCCGTCACGATCTAATCACGAGCACGAGGGCACCAACAAACTCCACATGTCACCATCATCGCCATATACAGACCACACAACGAGCAAAGAGTGTTCAGAAGACGAAGACGAGGAAATTGATGTAGATGACTGATTTTTTTTCTTGAACAGAATCGGTATTATTTATATACCTTTTTTTCAGAGATGGTCCTCGGAAACCACAGAGGTGAAAGTGCCATTAAAGCACCAAATGTATTAAATGACTTGTATTAAAAGCAAATTTAAAAAAGGAGAAAAAAAATCAACGCAAGCATGGGACAGTTTCTTCAGATCTATTTATGCAGTGGCAGTATCGTAATCATTT

Associated Phenotype:

Not determined