ZMP
scnm1
Ensembl ID:
ZFIN ID:
Description:
Sodium channel modifier 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2YDS5]
Human Orthologue:
SCNM1
Human Description:
sodium channel modifier 1 [Source:HGNC Symbol;Acc:23136]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa42749 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa14725 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa42749
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000004284 | Nonsense | 98 | 249 | 4 | 8 |
ENSDART00000132351 | Nonsense | 96 | 247 | 4 | 8 |
The following transcripts of ENSDARG00000003027 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 31934983)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 29754346 |
GRCz11 | 16 | 29688969 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCTGCGACGCGAAATTGATAAAAGAAGACATCAAGACTATGTCAAAGCA[G/T]AAGATGATCGACAGGTGATTCAATGTGTTTTCTTTGATCACTTTATCTAA
Long Flanking Sequence:
AGTATCTGTGAAGGCAAATCTATCCAACTTTACACATACATACAGCATGTGCTTGTTGACAAACCATTGCAAGTTGCAACATGAAATATCACTTTTTTTCTTCAAATTGTATTCAGTCACACATTGACATGTTCAAATAATACATTAATTACAATATTTATTAGTATTGATAATATATATACCCATTAAACATTTGAAAACAATGTTAAATAAAATATATATCTTAGTAGTATTTATTTAGTGTTGTTAAAGCTGAATATTCACATGATCATTTAGAAATAATTCCTTTAGAAACAAAAGAAGACTTTTATAAAGCAATGACACTTTGTTTGCAGACAGGCCTAGGATGCAAAAATGGAGATTTTAAATCCATTATGACAGAGTTAAGTCCTCTTTGGTTTTTTTTTTTTTTTTTTACAGGAATGAAATGGTTTTATGGCAAAAAGAATCAGCTGCGACGCGAAATTGATAAAAGAAGACATCAAGACTATGTCAAAGCA[G/T]AAGATGATCGACAGGTGATTCAATGTGTTTTCTTTGATCACTTTATCTAATCGTGCACCTTTCAATTTTGCTAATTTAATGCACATTTTTAAAATTACAATTTTTATTTGTCATGTGCTCAAAAGTATTGGCAGTGTTAGTTGTGTGATCCATGGCTAAAAAAAACATTTAAAAAACCTCTCCATTTTATTATTTCTTTTTTTTTTCTTTTGCTGTAATTGTCTTCTATTTCTATTTTCATACCCTACATACACATGTAAAAAAAAAAGTAGTGTGATGCATTCTCATTATTACATTGTTGCTTGTACTCAGGAACCCTCCAGTTCAGCTCCTCTACTGACCCAAACACGCAAAATTACCCATCATGCCTTACTCAGAACTGTTCCATACAGTAGCTGCCACAAAAAAGCTAGGTAAGGTCTGTGAGCCAAACATCTTTGCATTTAAATCTCCTTTCACATGTTAGAGTTGTTATTTTCCTTTCTAGACTGTTTGTGTCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14725
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000004284 | Nonsense | 101 | 249 | 4 | 8 |
ENSDART00000132351 | Nonsense | 99 | 247 | 4 | 8 |
The following transcripts of ENSDARG00000003027 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 31934974)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 29754337 |
GRCz11 | 16 | 29688960 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCGAAATTGATAAAAGAAGACAWCAAGACTATGTCAAAGCAGAAGATGAT[C/T]GACAGGTKATTCAATGTGTTTTCTTTGATCACTTTATCTAAWCGTGCAYC
Long Flanking Sequence:
GAAGGCAAATCTATCCAACTTTACACATACATACAGCATGTGCTTGTTGACAAACCATTGCAAGTTGCAACATGAAATATCACTTTTTTTCTTCAAATTGTATTCAGTCACACATTGACATGTTCAAATAATACATTAATTACAATATTTATTAGTATTGATAATATATATACCCATTAAACATTTGAAAACAATGTTAAATAAAATATATATCTTAGTAGTATTTATTTAGTGTTGTTAAAGCTGAATATTCACATGATCATTTAGAAATAATTCCTTTAGAAACAAAAGAAGACTTTTATAAAGCAATGACACTTTGTTTGCAGACAGGCCTAGGATGCAAAAATGGAGATTTTAAATCCATTATGACAGAGTTAAGTCCTCTTTGGTTTTTTTTTTTTTTTTTTACAGGAATGAAATGGTTTTATGGCAAAAAGAATCAGCTGCGACGCGAAATTGATAAAAGAAGACATCAAGACTATGTCAAAGCAGAAGATGAT[C/T]GACAGGTGATTCAATGTGTTTTCTTTGATCACTTTATCTAATCGTGCACCTTTCAATTTTGCTAATTTAATGCACATTTTTAAAATTACAATTTTTATTTGTCATGTGCTCAAAAGTATTGGCAGTGTTAGTTGTGTGATCCATGGCTAAAAAAAACATTTAAAAAACCTCTCCATTTTATTATTTCTTTTTTTTTTCTTTTGCTGTAATTGTCTTCTATTTCTATTTTCATACCCTACATACACATGTAAAAAAAAAAGTAGTGTGATGCATTCTCATTATTACATTGTTGCTTGTACTCAGGAACCCTCCAGTTCAGCTCCTCTACTGACCCAAACACGCAAAATTACCCATCATGCCTTACTCAGAACTGTTCCATACAGTAGCTGCCACAAAAAAGCTAGGTAAGGTCTGTGAGCCAAACATCTTTGCATTTAAATCTCCTTTCACATGTTAGAGTTGTTATTTTCCTTTCTAGACTGTTTGTGTCTCTGTAGTTT
Associated Phenotype:
Not determined