Busch Lab

ZMP

si:ch73-289n4.1

Ensembl ID:
ENSDARG00000010933
ZFIN ID:
ZDB-GENE-091204-7
Human Orthologue:
CACNA1F
Human Description:
calcium channel, voltage-dependent, L type, alpha 1F subunit [Source:HGNC Symbol;Acc:1393]
Mouse Orthologue:
Cacna1f
Mouse Description:
calcium channel, voltage-dependent, alpha 1F subunit Gene [Source:MGI Symbol;Acc:MGI:1859639]

Alleles

There are 10 alleles of this gene:

Allele Name Consequence Status Availability
sa31671 Nonsense Available for shipment Available now
sa13270 Splice Site, Nonsense Available for shipment Available now
sa14651 Nonsense Available for shipment Available now
sa21366 Splice Site, Nonsense Available for shipment Available now
sa38708 Nonsense Mutation detected in F1 DNA Not yet available
sa7156 Nonsense Mutation detected in F1 DNA Not yet available
sa34474 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa21367 Nonsense Available for shipment Available now
sa34475 Splice Site, Nonsense Mutation detected in F1 DNA Not yet available
sa1321 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa31671
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011078 Nonsense 364 1914 8 57
ENSDART00000142712 Nonsense 324 659 7 15
Genomic Location (Zv9):
Chromosome 8 (position 46678445)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 44867424
GRCz11 8 44861330
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCAGATGGAGGAGGACATGATCGGCTACATGGACTGGCTCATTGAAGCT[G/T]AGGATATGGATGAAGATGGAAATAAGCGTAATATAAACTTTATTTCTTAT
Long Flanking Sequence:
CTTTTTATAGTAATGTTAGCACATGTCGTCTGATTAGTTTTTTATTAACTGTGCCACTCAAGAAACTAAAATAAATGAATTTTTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTACCATGTTTCTTTCAGATGAACGATTCTATTGGGTTTGAGTTGCCTTGGGTTTATTTTGTGTCTCTGGTCATTTTTGGTTCATTCTTTGTCCTGAATCTTGTATTGGGTGTGCTGAGCGGGTGAGTAATTCCAGCTCTTACACCTTTTAATAAAATGTTTTATAATATTCTACTAAATTAGTGAAATTATAAAATAGCATTAAGAAGGATTATGGTTACATCCTTTAAGGCTTACATTGTAATATTTTTTTTACCTCCCAGCGAGTTCTCTAAAGAGAGAGAGAAGGCAGTGTGTCGCGGTGAGCTGCAGAAGGCTCAGGAGAAACAGCAGATGGAGGAGGACATGATCGGCTACATGGACTGGCTCATTGAAGCT[G/T]AGGATATGGATGAAGATGGAAATAAGCGTAATATAAACTTTATTTCTTATTTTTATCACATGACAATCAAAATAAAAAAAAAATCAAAAGTTGACAATGAGCAATTGGCCCATTTTTACACTCAACAAAAATATAAAGTCAACTTTTGTTTACTTTTGTATTTTTTTTTGCTTTTACACCTCAACATTTGTTTCAGAACCTGGCGTGTTTGCCCTGTTAGCTTAATTTGTTTGGTATATGTGTACATAGCATTCGCGCTTTGATCCACGCCAAAACAATCGGTCTGAGATCTGAGCCTGAATGAGGTGAAAAAATTGACCAAAATGAACATTTGATTGTAACACAGGGAGAGACAGAGACAACTGAGGTGAGGATCCACATGCAGGTTTTATTCGGCAGTCAGGCAAGCAATGGTCAACACAGATGCAAACAGAGATATAAAGGCAAATCCAGAATCGTAGTCACTATAACAGGCAAGAGGTCGGTAGGCAGGCGGCAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13270
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011078 Splice Site, Nonsense 456 1914 16 57
ENSDART00000142712 Splice Site 377 659 10 15
Genomic Location (Zv9):
Chromosome 8 (position 46682246)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 44863623
GRCz11 8 44857529
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATTTGCACATTTTACWCTTGCAAYTGTTAATTATTGTTCTCATCCTCAG[T/A]GAGYAACTGTACCACTTRAATGTAGTTATGAGGAWGAACTGTCGGGTTGC
Long Flanking Sequence:
TGGCTGGTACAAGCATAGTGAAGATGGAGGTACTGAGCATATTTTTATAAGTAATATATATGTTTGATATGTAAAAAGTTATAGGTTTTTTTTTTTATATTATTACATCTAAACACAATATTTTGTACAGAATCTGATTCTGATTCGGAGTTTGAAGCATTCCTGGATGATGACAATGGCTGCTGTGCTTCCATAATGTGAGCACAACATTCATTTTGTTGTTTCACATATTCTATAAAATAAGTTTTAACTGAGGATTAATACAGTTTCTTTCATTTTCTTAAGGGCACGACTGATGGCTATAAGTTTCTGGTAAGTGTTTGAGTAATTGCTGGAAAAACTGAAGTAAAAACTTTCCATGTTGAGCTGTTGAGGACCAGCAGACTAGCATTTTCCACACACCACAAATGTTTTTTTTTTTAGGAATCATTTCACATTCTTAAAGTATTCAATTTGCACATTTTACTCTTGCAACTGTTAATTATTGTTCTCATCCTCAG[T/A]GAGCAACTGTACCACTTGAATGTAGTTATGAGGAAGAACTGTCGGGTTGCAGTCAAATCCACCAATTTCTACTGGCTGGTGCTACTACTAGTGTTCCTCAACACTGCTGCCAGCGCTTCTGAACATTATGGCCAGCCCAAGTGGCTCACTGACATACAGGGTATGTGTGTGACCCTACAGTATCACCAAAGGGTTTGCCTTTATGAACATAATGACCATGTTTTAAATGTTGTCTCTCTATTGTGTCAGAACGAGCAAATAAGATCCTTCTGGCTCTGTTTACGCTGGAGATGCTGATGAAGATTTACAGCTTCGGGTTTCAGATCTACTTCATGGCACTCTTCAATCGTTTTGATTGTTTCGTGGTGTGTGGTGGAATTCTGGAAACTGTGCTTGTGGAGATGGAGGTGATCCCACCCATTGGAATCTCTGTGCTGCGCTGTGTCCGTCTGCTCCGTATCTTCAAAGTCACAAGGTGATTCTACTCAAATGTGTATCCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14651
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011078 Nonsense 458 1914 16 57
ENSDART00000142712 Nonsense 379 659 10 15
Genomic Location (Zv9):
Chromosome 8 (position 46682250)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 44863619
GRCz11 8 44857525
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGCACATTTTACWCTTGCAAYTGTTAATTATTGTTCTCATCCTCAGWGAG[C/T]AACTGTACCACTTRAATGTAGTTATGAGGAWGAACTGTCGGGTTGCAGTC
Long Flanking Sequence:
TGGTACAAGCATAGTGAAGATGGAGGTACTGAGCATATTTTTATAAGTAATATATATGTTTGATATGTAAAAAGTTATAGGTTTTTTTTTTTATATTATTACATCTAAACACAATATTTTGTACAGAATCTGATTCTGATTCGGAGTTTGAAGCATTCCTGGATGATGACAATGGCTGCTGTGCTTCCATAATGTGAGCACAACATTCATTTTGTTGTTTCACATATTCTATAAAATAAGTTTTAACTGAGGATTAATACAGTTTCTTTCATTTTCTTAAGGGCACGACTGATGGCTATAAGTTTCTGGTAAGTGTTTGAGTAATTGCTGGAAAAACTGAAGTAAAAACTTTCCATGTTGAGCTGTTGAGGACCAGCAGACTAGCATTTTCCACACACCACAAATGTTTTTTTTTTTAGGAATCATTTCACATTCTTAAAGTATTCAATTTGCACATTTTACTCTTGCAACTGTTAATTATTGTTCTCATCCTCAGTGAG[C/T]AACTGTACCACTTGAATGTAGTTATGAGGAAGAACTGTCGGGTTGCAGTCAAATCCACCAATTTCTACTGGCTGGTGCTACTACTAGTGTTCCTCAACACTGCTGCCAGCGCTTCTGAACATTATGGCCAGCCCAAGTGGCTCACTGACATACAGGGTATGTGTGTGACCCTACAGTATCACCAAAGGGTTTGCCTTTATGAACATAATGACCATGTTTTAAATGTTGTCTCTCTATTGTGTCAGAACGAGCAAATAAGATCCTTCTGGCTCTGTTTACGCTGGAGATGCTGATGAAGATTTACAGCTTCGGGTTTCAGATCTACTTCATGGCACTCTTCAATCGTTTTGATTGTTTCGTGGTGTGTGGTGGAATTCTGGAAACTGTGCTTGTGGAGATGGAGGTGATCCCACCCATTGGAATCTCTGTGCTGCGCTGTGTCCGTCTGCTCCGTATCTTCAAAGTCACAAGGTGATTCTACTCAAATGTGTATCCAGCTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21366
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011078 Splice Site, Nonsense 511 1914 17 57
ENSDART00000142712 Splice Site, Nonsense 432 659 11 15
Genomic Location (Zv9):
Chromosome 8 (position 46682498)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 44863371
GRCz11 8 44857277
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATGAACATAATGACCATGTTTTAAATGTTGTCTCTCTATTGTGTCAGAA[C/T]GAGCAAATAAGATCCTTCTGGCTCTGTTTACGCTGGAGATGCTGATGAAG
Long Flanking Sequence:
GAGGATTAATACAGTTTCTTTCATTTTCTTAAGGGCACGACTGATGGCTATAAGTTTCTGGTAAGTGTTTGAGTAATTGCTGGAAAAACTGAAGTAAAAACTTTCCATGTTGAGCTGTTGAGGACCAGCAGACTAGCATTTTCCACACACCACAAATGTTTTTTTTTTTAGGAATCATTTCACATTCTTAAAGTATTCAATTTGCACATTTTACTCTTGCAACTGTTAATTATTGTTCTCATCCTCAGTGAGCAACTGTACCACTTGAATGTAGTTATGAGGAAGAACTGTCGGGTTGCAGTCAAATCCACCAATTTCTACTGGCTGGTGCTACTACTAGTGTTCCTCAACACTGCTGCCAGCGCTTCTGAACATTATGGCCAGCCCAAGTGGCTCACTGACATACAGGGTATGTGTGTGACCCTACAGTATCACCAAAGGGTTTGCCTTTATGAACATAATGACCATGTTTTAAATGTTGTCTCTCTATTGTGTCAGAA[C/T]GAGCAAATAAGATCCTTCTGGCTCTGTTTACGCTGGAGATGCTGATGAAGATTTACAGCTTCGGGTTTCAGATCTACTTCATGGCACTCTTCAATCGTTTTGATTGTTTCGTGGTGTGTGGTGGAATTCTGGAAACTGTGCTTGTGGAGATGGAGGTGATCCCACCCATTGGAATCTCTGTGCTGCGCTGTGTCCGTCTGCTCCGTATCTTCAAAGTCACAAGGTGATTCTACTCAAATGTGTATCCAGCTCTTCCCAACAGGCACGCAACATCATAAGATGTTAGTATTAGGTTAGATTTTGGTCATGACATTAGGTGACCAAAATTCAGTTTAATTCAATTCAATTCAATTCAGCTTTATTTGTATAGCGCTTTTACAATGTAGATTGTGTCAAAGCAGCTTCACATAAATGGTCATAGTAACTAGAACAGTGTAGTTCAGTTTTTAGTGTTTAAGTTCAGTTTAGTTCAGTGTGATTTAAAATCATTACTGAGAGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38708
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011078 Nonsense 652 1914 18 57
ENSDART00000142712 Nonsense 573 659 12 15
Genomic Location (Zv9):
Chromosome 8 (position 46685254)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 44860615
GRCz11 8 44854521
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAAATGAAAAGAAGCACCTTCGACTCTTTTCCATCTGCCTTACTCACCTG[T/A]TTCCAGGTAATTTCATCCGTCTCTAAGCAGTGTTACAATTTACGTAATCG
Long Flanking Sequence:
CGAAACAGCTAAAGACGATTCATTTGAAGCACTATGAGTTGACTCTTTTATGAATGAATCAATAGTTTTAAACACTGCACTTTCAGATATAAGCTTTAGCTGGATATTTCACTTTACTTAGTGCTGTTACACACTACATGGAAGATCATTTTCAAAAACCCATAATAGGGGCTCTTTAAAAATGTAGATTTATTTTAAATGTATTCAACTATAATGACAACCATGTAATGCATCTTTAAAGCCATGTTTATTTTCAGGAGTATTTTGAACGTGCTGAATTTGCTAACATTTCTTTTTAGACACTGGGCTGCCCTCTCAGACCTGGTGGGCTCTTTGCTGAACTCTATGAAGGCCATTTGCTCCCTGCTGTTGCTGCTATTCCTCTTCCTCATTATTTTTGCTCTCCTGGGAATGCAGCTTTTCGGTGGAAAGTTCAACTTTGATGAGACTCAAATGAAAAGAAGCACCTTCGACTCTTTTCCATCTGCCTTACTCACCTG[T/A]TTCCAGGTAATTTCATCCGTCTCTAAGCAGTGTTACAATTTACGTAATCGTATGTGATTTCTGTATAATTGTGGTATAATCTGTATTATAAAAATTTACTAGAAAAGTAAAGTTTGCAGACAGACTTTATGGTGTCTTGAGAAAGCCTAGTCTGAAAGTTTAAAGTAGCTTTAAAAATTAAATAATTTAAGTAGTTTTTAGGAAGTTTGAAGCAGTTGGCATAGATGGATAACTGCATATCGGTTAGCAAGTTTCCCGTATGGGTTGGCATGTTTCTTGCTAGGTGGTTGCTAGGGTATTCTGAGTGATTGCTAAGCAGTTGCTAGGGTGTTTTGAGAGGTTGGTTCTGAGTGGTCGGTTCCAGGTAGTTGTTAAGGTGTTGCTTGGTGGTTGCTTGGGTATTCTGAGTAGTTGCTAAGTCAACCACTGAGCGGTTGCTAAGGCATTGCTAGGTGGTTCTTAGGTTGTTCTGAGTGGTTGCTAAGGCATTGCGAGGATGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7156
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011078 Nonsense 762 1914 23 57
ENSDART00000142712 None None 659 None 15
Genomic Location (Zv9):
Chromosome 8 (position 46689583)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 44856286
GRCz11 8 44850192
KASP Assay ID:
554-4651.1 (used for ordering genotyping assays)
KASP Sequence:
TTAACATATTTMTKCTTGTTCAGAATGARATGGATGATTGGGAAGAGAAT[G/T]AAGAGCTRAGAGCAATYGAAGGGCTTGAGGGTAAATTCTTWMCACTTCAG
Long Flanking Sequence:
ACTTTTTCTCTTTTTTAAAACGTTTGTGAACTATAATGCAACACATTTCAGAATATAATTAAAATATTAAGCAGGAACTAATGTGGGATATGATTGGATTTTACTCATTAGAATTTGATTCGCTTTTGAAAAGAAGGATAGGATATGGGTAATGTTTTCAAGTTGATAAGGACTTTCTGATGAATGATGAATAATGATTATTTTTTGATCAATGACATTTATTAATCGATAAAAATCAATTTGCATTTCTATAATTGTTGTTGATTATAATTTATTTTAGTCTTTTATTGTCGTTATCCTTGCTTTCCTCTGAGCTGTGTGAAATGCTGGACTTCTCAGCCATTTGAGTGTTTAACATGTAGCAAGGCCCTCAGATCTCACAGAAGAGTTGGAAGGAATTGCTTCATCTCAAGAAATGGACTTATAGGACAATAAACGCTTTAAATCTTTTTAACATATTTATTCTTGTTCAGAATGAGATGGATGATTGGGAAGAGAAT[G/T]AAGAGCTGAGAGCAATCGAAGGGCTTGAGGGTAAATTCTTTCCACTTCAGGTCAATGTCAATTGATTAATGTGTTTATTTTATCATTTATTGATTTTTGAATCTTGGTGATCTCTAAAGGTATAGGCACTCCAATGAAGGTCGAAAGTTTCCAACCCAAAGAGAAAATTGTGCCTATTCCTGATGGCAGTTCCTTTTTTGTCCTTGGAAAGAAAAACTGGTATGTGTGTTTGTGTTTGTTTGTGTGCAAGTCTTTGTGTTTTACGGGGACAAGAAGTTGTATAATGACATGGGTATGGTTTAAAGCAGGGGTCTCAAACTCAATTTACCTGGGGGCTGCAGGAGGCAAAGTCTGGGTGAGGCTGGGCCGCATAAGGGATTTCACAAAAAAAAGTCCTCAAATGTCATTGTTAACAGTTTTAATTATTTCTTCTGAACATGAAGTGTCCTGAACATTAATAGAACATTGAGTGAAGATTATGAACAGTTCTTCTGAACATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34474
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011078 Essential Splice Site 1156 1914 33 57
ENSDART00000142712 None None 659 None 15
Genomic Location (Zv9):
Chromosome 8 (position 46702469)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 44843795
GRCz11 8 44837701
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATATCATGTTTGTCCTCATTCTGCTCAACACACTCACGTTGGCTGTACAG[G/A]TACACACACATACACATTTAAGCATGCTATAATTTCAATGTCCTACATAA
Long Flanking Sequence:
AAAGCCATTGATGCCAATGCAGAGAACAGAGGACCCATCTATAACTACCGTGTAGAGATTTCCATCTTCTTCATCATCTACATTATCATCATTGCCTTCTTCATGATGAACATCTTTGTGGGTTTTGTCATTATCACATTTCGTGAACAAGGAGAGGCAGAGTTTAAAAACTGTGAACTAAATAAAAATCAGGTTAGTGAATACTGACATATATTTAAGTATTTAGGAATACAGTAGAACCTTTTTTCATCATCTAGTCTACTCGGTTGATTTTAGGGTGTTTTTTTTTCATTGTTGTTGCTCTTGTTCTCATGGTGTCTCTCTGCTCCTTTTGCTCGTAGCGTCAGTGCGTGTATTATGCACTGAAAGCTCAACCAATAAAGATTTACATTCCCAAAAACCCTTCCCAACTTAAATTTTGGAAGATCATAAATTCCTCTCAGTTCGAGTATATCATGTTTGTCCTCATTCTGCTCAACACACTCACGTTGGCTGTACAG[G/A]TACACACACATACACATTTAAGCATGCTATAATTTCAATGTCCTACATAACTACATCACTAAATTGATTACATTACTGTGATCCCACAGCATTATGAGCAATCCAAACTCTTCAACTCTGTGATGGACATACTGAACATGATCTTCACGACGCTCTTTACTGTTGAGATGATCATCAAACTCATGGCTCTGAGACCTTATGTGAGAGTTTCTTTTACTTTTAACTTTGATCAAGGGATATAATATGCAGTCTTAAAACATGTTCATGTTTACGTTTCTGTTTTTTCCTCTCTCCTTTTGCTCTCAACATCTTTGTCTTGGATTTGACAGCATTATTTTATAGATGCCTGGAATTCTTTTGATGCACTGATAGTGGTGGGCAGTTTGGTGGACATCATGATTGCAGAGCTGAGCGTATGTACTTATTCTGAAACTATTTCTCATGTATGAGAGAATCTCATCAATGCAAGTTTGTTTCATTAAAATGCATTATGCTTTGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21367
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011078 Nonsense 1195 1914 35 57
ENSDART00000142712 None None 659 None 15
Genomic Location (Zv9):
Chromosome 8 (position 46702804)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 44843460
GRCz11 8 44837366
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCTCTCTCCTTTTGCTCTCAACATCTTTGTCTTGGATTTGACAGCATTA[T/A]TTTATAGATGCCTGGAATTCTTTTGATGCACTGATAGTGGTGGGCAGTTT
Long Flanking Sequence:
TCGTAGCGTCAGTGCGTGTATTATGCACTGAAAGCTCAACCAATAAAGATTTACATTCCCAAAAACCCTTCCCAACTTAAATTTTGGAAGATCATAAATTCCTCTCAGTTCGAGTATATCATGTTTGTCCTCATTCTGCTCAACACACTCACGTTGGCTGTACAGGTACACACACATACACATTTAAGCATGCTATAATTTCAATGTCCTACATAACTACATCACTAAATTGATTACATTACTGTGATCCCACAGCATTATGAGCAATCCAAACTCTTCAACTCTGTGATGGACATACTGAACATGATCTTCACGACGCTCTTTACTGTTGAGATGATCATCAAACTCATGGCTCTGAGACCTTATGTGAGAGTTTCTTTTACTTTTAACTTTGATCAAGGGATATAATATGCAGTCTTAAAACATGTTCATGTTTACGTTTCTGTTTTTTCCTCTCTCCTTTTGCTCTCAACATCTTTGTCTTGGATTTGACAGCATTA[T/A]TTTATAGATGCCTGGAATTCTTTTGATGCACTGATAGTGGTGGGCAGTTTGGTGGACATCATGATTGCAGAGCTGAGCGTATGTACTTATTCTGAAACTATTTCTCATGTATGAGAGAATCTCATCAATGCAAGTTTGTTTCATTAAAATGCATTATGCTTTGTTATCTTAAACACAGAAACTTACCATTTTTAATTTCAAATCTCTTCTGTTCATTTTCACTTCAAATCTCTGAAATATCCTGTTACTTCCCCAGGGTGGTGGAGGCCATGGTGAGGTAAGAATATGCCATAGTGATCTTGTTTAGCTGTGAAGATTTCAGCAAATAATTGCATCATTGGCCAGCACTATTCAATTAGATTTTTCTTTATCTTCATAGAGCATTTACAATGTGGATTGTCAAAGCAGCGTAGCATCAATTAAGAAAAGACAATAAAGGCTGGTAGGCAGGAGAGTAGGGAGCTGTTGTTGATATAGTCTTGCTTTCTACTGAATATCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34475
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011078 Splice Site, Nonsense 1521 1914 44 57
ENSDART00000142712 None None 659 None 15
Genomic Location (Zv9):
Chromosome 8 (position 46712357)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 44834542
GRCz11 8 44828448
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGGAAACGCACCAAACCCAAACTCCTAGATGAAGTTATACCTCCCCCTT[C/A]AGGTACAGTTTGCTAAGATTTTTTCTAGTAGACTTTATGTTTTGAATTTG
Long Flanking Sequence:
GATCAGTCTTGCCTTGTTAACTGAAAAAAAGAAAAAAAAACACAATTCTGCTTTGCCTGCTATGTAGAATCCAGGCAACATATAATTCCAGGCTGAAATTAGTTTATAATTATGCTATGGATACCAGGCTAATGTGGAAATACAACTGGTCACAGCTTACTCACATCTTCCAGCTATCATGACATCACAGATTATCATCACTGATGATTTATATTCATGACCCTACTAAATAAGGTCAAAGCAGACCATTTCCTTCTAGGGGGAAGTCCAAGGGTTGTAAGCCGTATATAACTCATAGGTAGATATCAGAGAACAATTTAACATATTGTATCAATGCATTCTTTGTAACCATTAAGACAAGATTTAAATACATAAATTGAATACCTTTCTATTCACCACAGGCCCCATTGATCAACAGAATGAAGAGCTGAGAGCTATTATTAAAAAGATCTGGAAACGCACCAAACCCAAACTCCTAGATGAAGTTATACCTCCCCCTT[C/A]AGGTACAGTTTGCTAAGATTTTTTCTAGTAGACTTTATGTTTTGAATTTGGACTATATAACTTTATCTCTTACTTTTTTTATTCTCTGTCTATGTTCTAGGCAATGAAGTGACTGCAGGGAAGTTTTATGCCAGCTTTCTAATTCAGGACTACTTTAAAAAGTTTCGCAAGAGAAAGGAGAAAGAGAGGAAGAAGAAAGGCAAAGACAAATCAGCCTCTCTCCAGGTAAAGTAATATGGCAGTTGTCTATCTGTGTGGGACAGATTTTGCCTACAATGGATAACGAAAGCCTAATATACAGACATTGTAGGGAAAAATCAACCAAATTTTTATTATTATTTTTTATTATTATTCTTGGAGATTCATATACTGTAGAACAAACCTCACTGGTGAATGGCTTAAATACAAACAGCACGTCACATGCCTGTCCAGTGGCAGAAAAATACTGATACAGTACACTGCTTCTACAATAAAGCATGCAAACTGTATCACTCTGTTCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1321
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011078 Nonsense 1874 1914 57 57
ENSDART00000142712 None None 659 None 15
Genomic Location (Zv9):
Chromosome 8 (position 46736911)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 44809884
GRCz11 8 44803790
KASP Assay ID:
554-1235.1 (used for ordering genotyping assays)
KASP Sequence:
AAGACCGCAAATTTGTTGACTTCGCAAAACGGGAGATTGCAGATGCCTGT[C/T]AAATGACTGTTGATGAAATGGAGAACGCCGCAACTGACCTTTTATGTAGA
Long Flanking Sequence:
ACGCAGCTTCAAAAATTTGTTTCAAACCGGAAGTACGAATTTGCTTGAATTACCGCAAAAACAACCAATTTACACTTTTTAGTGAAATATATGTGTCCTAATAGTGTTTATAGCAGTGTGGGACACATATACGACTGTCAACAGCTCAAAAAATGTGTTTTGGTGTTTCGTGACCCTTTAACAGATGTTTTTAATCCACCTCATTATGGTGGAACTTTATCATTTTAATTCTTTTATTTATTAGGTTGGAAAACAATTCTAAAAATATTGCCTTGAACTGTATGTATAAAAAGGCCTAGGCAAATTTTTTGTCATCCTTTTTGTCCTCAAATTGTCTAAGATCAAAAATAGGACCGTCTCTGTGCAACATCTGGTCTGACATTCGTTTTGTCTTGTGGTTTTTCCCTGTCTTTTAGATTCTGATTTCTGAAGGCTTGGGTCTATATGCCAAAGACCGCAAATTTGTTGACTTCGCAAAACGGGAGATTGCAGATGCCTGT[C/T]AAATGACTGTTGATGAAATGGAGAACGCCGCAACTGACCTTTTATGTAGAGGAAGGGCAGGGCAACCAACCGGACGCTTCGATGAGGATCTGTCTGATGAGATGAACTGTGTGATCTCGTACTAAATGAGCTTCAGTTTGATGCACAGGGAAGAAGTAAATTGTGAGTGTGATGTCATCAAAAACATTGACTTATTCATTTACTGAGCTCAGTTTGAAAGATGTAGTAATAGTTATATTCATTTCGAACAATAGACATGAGGAACATGTGATAACCACATAAACCCAATTGTTCATTTTCTTTTTTTATGGAAAAAAACTTTGGGAAAATATGAGATGATGCCAATGTTGGGTATGTATACAACACTTTCATATATTATATGTATGTTAATTATTACCTTACAGAGGAAAAAACACATTTGCTTCGGATGTGGTCAAATGTTAAAATGAAGCAGATGGTTTTGGATTATTTGTTAATGTGACATTACCATTACAAAATAC
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461