Busch Lab

ZMP

si:ch73-60e21.3

Ensembl ID:
ENSDARG00000029146
ZFIN ID:
ZDB-GENE-030131-7126
Description:
LOC565797 protein [Source:UniProtKB/TrEMBL;Acc:A5PLF1]
Human Orthologue:
LRP1
Human Description:
low density lipoprotein receptor-related protein 1 [Source:HGNC Symbol;Acc:6692]
Mouse Orthologue:
Lrp1
Mouse Description:
low density lipoprotein receptor-related protein 1 Gene [Source:MGI Symbol;Acc:MGI:96828]

Alleles

There are 15 alleles of this gene:

Allele Name Consequence Status Availability
sa24342 Nonsense Available for shipment Available now
sa24341 Nonsense Available for shipment Available now
sa12511 Nonsense Available for shipment Available now
sa14527 Essential Splice Site Available for shipment Available now
sa18116 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa24342
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088208 Nonsense 1072 4549 21 89
Genomic Location (Zv9):
Chromosome 23 (position 25829593)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 25615713
GRCz11 23 25542254
KASP Assay ID:
2261-7817.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTTTTTGCAGCCACGCGGCCTCCCGGCGGTTGCCACACGGATGAGTTC[C/T]AATGCCGGATGGATGGTTTGTGTATTCCCATGCGATGGCGCTGTGATGGA
Long Flanking Sequence:
AATGTTAAATGTAGCATAATAATTAAAACTATTCAAAAACACATTAAGTTTACAGTCAGACTTATGTATGGATATGAACTATGATGTCATTCAGGCCAGTTCACCCCAGCAGATCCCTGTTCTAGGACACACTTCTCTCTGTTTATGGGACAAGCGGTGGTTTTCCGCTTCCCCCGTCTCCTCTCAGACTCTGCCAGACGCGAACCTTTGCCATGAGGGAAAGCCTTTATGTCCGATGCCTAATGATGACCGTCACTGTGCCAGGCCTGGACCGCTGTTCATGAGAAAGTTTGCTTTGGATCAGAGTTCAGGGTGGTTGTGCCTCACACTAGTTCCACATTTTATCCTTGGGAACAGATTTTTTGACGTCAGGAAGCCGAGCGCTCATTATCGTCAAATAATAGGTTAATAATAGTGTTCTCATGACTGCATTGTGATTGGATTTTTTACTTTTTTTTGCAGCCACGCGGCCTCCCGGCGGTTGCCACACGGATGAGTTC[C/T]AATGCCGGATGGATGGTTTGTGTATTCCCATGCGATGGCGCTGTGATGGAGACACGGACTGCATGGACCTCAGCGATGAGAAGAACTGCGAGGGTGTCACGCACATGTGCGATCCTGCTGTTAAGTTTGCATGCAAGGACTCAGGTTAGTAGGTGTTTGTGCTGAATGTTCCTCACATTTATATTCACAGAAAACTAAAAAAATATTGATGATGCACCTTCACACATCTTGTATTCACCCATTTTTGTGTTTCCCCTTTAAATCATTTCACCTACCAATAAATATATTGATGATTTACTTTTCAATCTTCAGTGCTAATGCGTGTTTCTATTTCTATATATATATACACAGTTGAAGTCAGAATTATTAGCCCCCCTGAATCATTAGCACCCCTGTTTATTTTTTCCCCAATTTCTGTTTAATGGAGGGAAGATTGTTTCAGCACATTTCTAAACATAATAGTTTTAATATCTCATTTCTAATGACTGATTTATTTTATC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24341
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088208 Nonsense 1500 4549 27 89
Genomic Location (Zv9):
Chromosome 23 (position 25819558)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 25605678
GRCz11 23 25532219
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCCTTTCGCCGTCACCCTGTATGGAGGAGAAGTGTACTGGACAGACTGG[C/T]GAACCAACACTCTGGCGAGGGCCAACAAGTGGACGGGACACAACGTGACT
Long Flanking Sequence:
TAATTAAGTTATTTATGAGTTGTTGTTTTTTTTGTTCGTTAACTGGGATCTTTATTTTAAGCAAACAAGCAAAAAAAAACTAAATAAAAAAAGATGCTGGTACAAGTAATGTCTCTTCTTCCAGAATTCTGTTCTGGACAGACTGGGACGCGAGCTCACCCAGGATAGAAGCTGCATCTATGAGTGGGGAGGGTCGTCGCACTATTCACAAAGAGACTGGGATTGGTGGCTGGCCCAACGGCCTCACTGTTGACTACCTCGAGCGCCGTATCCTGTGGATTGATGCCAGGTATGCACACTTTATTGCTACTAACATATGAAGTAACATACATAATGTGATGTATGCGATTTTTCTAAAAATGAACATCTTTAGATCTGATGCCATCTACTCTGCTGCTTATGATGGTTCGGGCCTGATCGAGGTGCTGCGAGGTCATGAACACTTGTCTCACCCTTTCGCCGTCACCCTGTATGGAGGAGAAGTGTACTGGACAGACTGG[C/T]GAACCAACACTCTGGCGAGGGCCAACAAGTGGACGGGACACAACGTGACTGTAGTCCAGAGAACAAACACTCAGCCGTTTGACCTTCAAGTATTTCATCCATCCAGACAACCTCAGGGTGAGAAGCAGCAGGAGTTGGTTAAAAAAAAATACATTGAAATAAAGACGGCTCTTTATTTGCACATGTTTTGCTTAGGAATGCCCATTTGTGTTAATTTTGCTAACCGACAACCACTGCTCGTTAATCGAATATTAACCATTAATTGGTTTAAATTATTATTTAATTAAAAAAATAAAATTGTGTCTATTTTGTTTCTGACACATAAATATTGCATAAAATACTGATTTATTTTACATCGCGAAGATATTAACAACAGAACATTTTCAAGCACCTGCAGTTTTTCCAACATCATAGAAAAAAAAGAATAAACTAAATAAAAATAATAAAATAAACAGTTCTGCCCTAGATATATTTCACTTAAATGACGAATTTAGATTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12511
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088208 Nonsense 1605 4549 29 89
Genomic Location (Zv9):
Chromosome 23 (position 25812704)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 25598824
GRCz11 23 25525365
KASP Assay ID:
2261-7814.1 (used for ordering genotyping assays)
KASP Sequence:
CTTTAYGCTCGTCAGATTGAGATCAGAGGGGTTGACATTGATAATCCCTA[T/G]TACAACTACATCATCTCCTTCACTGTCCCYGACATTGACAATGTGACTGT
Long Flanking Sequence:
GTAAAATTAAATGCAAATTAAAAACTAAAAAAATATTTTTGATAGTTTTAGATTAAATATTTTAGAATTATTATATTTTAGATAGTAAGATTTCTGTAATTGGCATGTAGTTTAGTTTATTTCCTCAAAACTAAAATTATAATTACAAATATATGCATAAAAACTGATAAAGGTGACAAAAACATAAAATTGCAACAGATTCTGACTTAAAAAATAAAATCTGATTAATGATAATAAAATAGCACTCTTACACATAACAGATGACTTTTAAAAAACAAAATCTGAACTTTCATCCAGCACTGCACCGTATATTTGTGATGTACAGTAAATGCTGTTTTATTAACCATCAATAAAATGATTTGTTTGGCTCATTTCTTCAGATGTTTACATTAACATTTGTAGTGATGATGACTCTTGTGGTTTTTCTGTTCAGAGTATCGTCAGTTCCTGCTTTACGCTCGTCAGATTGAGATCAGAGGGGTTGACATTGATAATCCCTA[T/G]TACAACTACATCATCTCCTTCACTGTCCCTGACATTGACAATGTGACTGTGGTGGATTATGATGCTCTGGAGCACCGAATCTACTGGTCTGATGTTCGCACGCAGACCATCAAAAGAGCCTTCATCAATGGCACTGGTGTGGAGACGGTGGTGTCTGCTGGTGAGATTATAGCTTAAGTTTCAACTTCTCTTATCCTGAGAAAATATTAGCCCCAAAACTATAAATAAAAATGTAAAAATGGATAAATGTCTTTATTTAGAAAGATAAATGACCTATTTTTATTATGTGTGGTATGAAGTAGGGTTACTTTAGTGTCACTGAATACTGAATACCTGGTATAATTTTTATTGATGGTTTGGATTAGTATTTTTTTCATGACTTTAAGTCATTTTATGTTTTTTTGTTTTTGTTATTTGTTATTTGTGGATTGTTTTAAATTATTTTGTTTAAGAATTTTTAGGATTTTAGTTTCAATTAGCTTAAATTGATAAGCATATCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14527
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088208 Essential Splice Site 1751 4549 31 89
Genomic Location (Zv9):
Chromosome 23 (position 25809998)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 25596118
GRCz11 23 25522659
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GATGGCACCAACCACACACTGCTGTTCACCAAKCAGAAAGGCCCAGTTGG[T/C]GAGTGAGCTGTCTTACATACCTTTTGTTTGCCCAAAGCTAAAAGATGATG
Long Flanking Sequence:
TATATGTTGTTGTATTGTAATTCCTAAAAAATATAAATATATTTAAACTGGTAATTGCATAATAAAGTAATAAATAATAAAACAATAATAATTAATGTTTTTTTATTCAGAAAATTTAATAATGGGCATAATTTCGTCACCTTAGAATTATAAGGTTTTATCTGCGTTCTGAATACTTTTGAGATATTGAGCTTCAAAGTTTTTTTTATTATTATTTATTATTCATATTAGTAGTAGTAGTAGTAGTAGTAATAGTAGTAGTATTTCATTAAATATTTAGTTATAAAAATAATCAATTAATTATTACAATATTAGAATTCCTTAGCTGTACGATGACAAGAATGTTATTTTATCAATATAAATCTTTTAACTACATATTCAATCCATAATAAATTTAATTACAGGAAACTTTATTGGCTGGATGGAGACAACATCAGCATGGCCAACATGGATGGCACCAACCACACACTGCTGTTCACCAATCAGAAAGGCCCAGTTGG[T/C]GAGTGAGCTGTCTTACATACCTTTTGTTTGCCCAAAGCTAAAAGATGATGCTTTACACATTGATTTTTTTCATTCTTGTGGTAGGCTTGTCCATTGACTTCGACTCAGAACAATTGTACTGGATCAGCTCAAGGAACAGCACCATCAACCACTGTAAGATGGACGGCTCTGGGTTGGAAGTCATTGAAAGCGTGAAAGGAAAACTCACCAAAGCTACAGCCCTCGCCATCATGGGTGAGAGAAAATAGTCAAGCTATAGTCACCAATGCTAGAATAAAGTCTGTTGTGTTAGATTGCCTCAAAGTCACAAGTTATTTGTAACTCATACGACTAGTTTTTTTTTGAAGGTGAATTTATATGTAAAATTCACTTTGTAAGGTGTTTGAACACAGATGTGCGTCAACACTTTGTAAAAAAAGGCCTGCAATGGTAAAAATGCAGCCACTTTTTATAATCCCCATAAATGTGTGTTTCCAAACACCAGAATTGTTTTTATACTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18116
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088208 Essential Splice Site 2732 4549 51 89
Genomic Location (Zv9):
Chromosome 23 (position 25787020)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 25573140
GRCz11 23 25499681
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAAATTCGACCTAAATTGTTTTGACAGTATGTTTTGCATTTGTTTTTTTA[G/A]AAAAGTTTTTCCAGTTCTGTGCATCTAATCAGTTTGAATGTGGAAACCAT
Long Flanking Sequence:
TGTTTATAATACAAGCGCATTACTAGAGATGCAACAATTAAATGATTTCAATATTGAATGCGCTTTAATTTGTCATGGTTGATTAATTGTAAAGGCTTCTCAACAGCACACACGCACACACTAGATTAAAGGCTAATTTTAACTGTGGTTGAGGCTGAGGCTACTAACTAAGTGGCATTGGCATATACCATCTTTTGTATGCGCAAGTTCGTTATTTCCAATGGAGGAACACAGCTTGCGTCTATATTGGCAGTGACATGCACATGGTGCATAACTCAGACTATAATCGTACAACCAAAAACTATAATCGTTCCATCCCTATGCAATATGCAAATAGTTGTAAAAATGTAAGCTAATAGAAAATAATTTATTTTAGCACTTTGAAAATGAGATATTCAGTACTACAACACTGGTTGCCTCCTGATCACATAAATCAAAATGTATCAAGATAAAATTCGACCTAAATTGTTTTGACAGTATGTTTTGCATTTGTTTTTTTA[G/A]AAAAGTTTTTCCAGTTCTGTGCATCTAATCAGTTTGAATGTGGAAACCATCGCTGTATCTTCAAAACCTGGGTGTGTGACGGCACTGATGACTGTGGCGACGGCACTGATGAGGACAGCAGATGCAGTGAGTCACATAACAACCTTCAACAACAAACAAAAACTCTGCTAAACCTCTCCTAAACCATTTTTATCAATCAACCTTCATCTAATGATGCACTTCTACCTTTGTTCATGGCTTTTGAGGATAACAGCAGATCACACAATCTGTCCATGTTGGCATCTTGCTTAATGTGCCGAGTTAACAACATAAGAATTTACACTACTGTTTGTTTGGACACAGTACATTTGACGTCAACAAAACAGAAGATACGGACATATTTTGCCCCTTTGTAAAGGCAGTTTTCTGGTGATCACTGCTTGATTTTATGGTTAGCTGCGTTTTATTATTTGCAATAAACTTGTTTTTTACCCTCACATCTAGGAGGAAGATGTGGTGGT
Associated Phenotype:
Not determined