ZMP
cacna1f
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate voltage-dependent calcium channel P/Q type alpha 1 subunit (CACN
Human Orthologue:
CACNA1F
Human Description:
calcium channel, voltage-dependent, L type, alpha 1F subunit [Source:HGNC Symbol;Acc:1393]
Mouse Orthologue:
Cacna1f
Mouse Description:
calcium channel, voltage-dependent, alpha 1F subunit Gene [Source:MGI Symbol;Acc:MGI:1859639]
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa14371 | Essential Splice Site | Available for shipment | Available now |
| sa10599 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa14371
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041564 | Essential Splice Site | 1481 | 2126 | 41 | 55 |
| ENSDART00000134151 | Essential Splice Site | 1461 | 1612 | 36 | 40 |
| ENSDART00000136403 | None | None | 313 | None | 5 |
Genomic Location (Zv9):
Chromosome 8 (position 23762854)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 22888672 |
| GRCz11 | 8 | 22909911 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCCACCGCTTGGATTTGGGAAGCTCTGTCCTCATCGTGTGGCCTGCAAGG[T/C]ACAGACACGCATACACAGAGTCATTTGCKATGATTTCTCTTTCTATTTTT
Long Flanking Sequence:
TAGAGGTGGTCTAGCGACAGATGCTGGAGGCCATGGTCTTTAGCCTCCTTGTTAGAGCAACTGACTCTTATGCGGAAGGTCGTTGGTTCTATCCCAGCTCGGAGCAGGTTGGGTGGTGTAGGACCAGGATGTTTACACAGGCCATGATGTTACTATAATTTGCATGGTTACCTGCAAATGTTTGTTGTGCCTTCTCAGATTATTAATCTGTTTGTCGCCGTCATTATGGATAATTTCGACTACCTGACTCGTGATTGGTCAATTCTTGGCCCACATCACCTGGATGAGTTTAAAAGAATCTGGTCAGAGTACGACCCAGAAGCCAAGTAAGACTATCAGTTTCTCTTAAACTTTTTAATCTATTTAAACCAGAAGCGTCTTCAAATGTGTGTTGTTTACCAGGGGTCGTATTAAGCACTTGGATGTAGTGGCTTTGCTCAGGAGGATCCAGCCACCGCTTGGATTTGGGAAGCTCTGTCCTCATCGTGTGGCCTGCAAGG[T/C]ACAGACACGCATACACAGAGTCATTTGCTATGATTTCTCTTTCTATTTTTTCCTCTCTTACTTTGCTTCTGTCTGCTGTTGGCAGAGGCTGGTGGCCATGAACATGCCCCTGAACGCTGACGGTACGGTGACCTTCAACGCCACCCTGTTCGCCCTGGTCAGAACTGCCCTGAAAATAAAAACTGATGGTCTGTTTGGGCAAACACACACTCACATGCTGCATATTCATGCACATCACCACCGTTTTAGCTAGAGATGATTCAAATGAAAATGTGCTTTGCATATAAATTATTCAAAACAAACTAAAATGTGACCATAGAATATTACTAGGTTGTAAAAGCTTTTCAAATAGTGACAGGTTAATAACACAATTTGCATTTACACCAAACCAAGGTTGACTTGGTCTTGCAGTAGGTACCTGTGAAATCTGATGTGGCTGTAATGTGTTTTTTTTAGGGAACCCGGATCAAGAGAACGAAGAGTTGAGAATTATTATTAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10599
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041564 | Nonsense | 1905 | 2126 | 52 | 55 |
| ENSDART00000134151 | None | None | 1612 | None | 40 |
| ENSDART00000136403 | Nonsense | 95 | 313 | 3 | 5 |
Genomic Location (Zv9):
Chromosome 8 (position 23771647)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 22897465 |
| GRCz11 | 8 | 22918704 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACATACAGTGTTTAAGAAGGCAAGGCAGCAGCGATGATCTGCCCATTCCA[G/T]GAAYCTATCATCAGAACTCGCCGCCCTGCAGAGCACGCTCACAGGTAACA
Long Flanking Sequence:
CATTGTATCCTTAAATGTATTCCATTTGAATCATTTTTTGATAACGGGTAATTCGAAAAAAATCCTTAGCAAGGTCTTAAAAAGTCTTACATTTAATTTGGTGAAACTTGCAGAAACCCGATGATAAAGGATTTAAAGCATATGACGAAAACACAATATCCATATTAAAAATGTTTTCCATCAGGCATGGTTATCCAGAGGACAGCACAATTTTCCAAGGACATAGAGACATGTATGATGGACACTCTATGAGACACCCTGTCTATGGAAATCATTATGGAAACAGTTATGGAGATGGCAGAAGAACAGCACGGAGACGCCTCCTGCCAGCAACACCTACAGGTAAAATCAAGTATTGATAATTTTGCTTGTAGGCAAAGGTATAACAAGTTTTATCTTTCTGTTTCACTCCATATTTTCTTTATGTTTTAGGGAGAAAGGCTTCGTTTAACATACAGTGTTTAAGAAGGCAAGGCAGCAGCGATGATCTGCCCATTCCA[G/T]GAACCTATCATCAGAACTCGCCGCCCTGCAGAGCACGCTCACAGGTAACATCACCAAATGATATATAAAACAGTCTATGGCACACTACTTAAGAAGATTACATCTGTTTCACAAAATGCACATATGACAATGACAATTTATTTATATAGCACAATTAAAACAACCCAAGTTGACCAATGTGCTTCACAATAATTAAAAAACCATGAACAGCAAGAATAAGTCAAAGACAAAAGCAAGTTTAAAAAATTAAATACAATGAATAAGAATGATATTCAGTGTGTCAACATAGCCAGTCATTATTAGTAAAAATTAAATAATTATAGTTTTTATAATCAGACTTGATAAAAACAGTCTGCAGAAACACTTTGATTGACATTCTTCCTTAGGGCCCTATCATACACCCGGCGCAGTGTGGCGCAAGGCATAATGCAGTAGTCTTTTGGTAGTTTAAGCTTGGCGCAAGAGTCGTTTTGAGGCTTTGCGCTACGCTATTTAAAGAG
Associated Phenotype:
Not determined