Busch Lab

ZMP

LIMD1 (1 of 2)

Ensembl ID:
ENSDARG00000077964
Description:
LIM domains containing 1 [Source:HGNC Symbol;Acc:6612]
Human Orthologue:
LIMD1
Human Description:
LIM domains containing 1 [Source:HGNC Symbol;Acc:6612]
Mouse Orthologue:
Limd1
Mouse Description:
LIM domains containing 1 Gene [Source:MGI Symbol;Acc:MGI:1352502]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa14416 Nonsense Available for shipment Available now
sa6404 Nonsense Mutation detected in F1 DNA Not yet available
sa36020 Nonsense Mutation detected in F1 DNA Not yet available
sa10287 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa14416
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110395 Nonsense 61 544 1 8
Genomic Location (Zv9):
Chromosome 16 (position 3932992)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 3090904
GRCz11 4 75175227
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCAGGAAAGTKTTTGCCTCAAAAATGACYAAAATACACATCCAGAAGCAA[C/T]AGGAGGAGATGGCAAAAACCAGTTTGGCAGCAAGGATCAACGGGAGTCTT
Long Flanking Sequence:
TTTGCTGGATGATATTCAGAATGCCGACGACCTCTTCGTTGATATAGTTTACCTTCTCATTTGGCCGTTTATTACTTAATATCATTACTGCTGGTCTGCTGCTTGACTGGATTTAATCTGCTTCATGTGATGTTTACGGACTCTTCACTTTTATTGTGCAGTTTTGAGTCTTATTTGTGGTTCTCCACAGGTGAAGGAGTTTGAACAGCTGTTCCCCGTCAGTTTTCAATGGTTTGACTTTATTCACCGCTGGAGACCCTGACAGAAGCCACTGAAAGACTTACTTTGTTTAGTTTTAGTTCGAGTTTTCAGTCACAAACATGGATAAATACGACGATTTGGGACTAGAGGCGAGTAAGTTCATTGAGGACTTGAACATGTACGAAGCGTCGAAGGACGGTTTATTTCGCGTGAAGAGGGACGCGGGAAACAACCCTGATTTTGAAGAAACCAGGAAAGTTTTTGCCTCAAAAATGACCAAAATACACATCCAGAAGCAA[C/T]AGGAGGAGATGGCAAAAACCAGTTTGGCAGCAAGGATCAACGGGAGTCTTTCTAAAGTGTCGGATAACACATTGTACACCAAAGACAGACCACCCATCAATACTTACAGACAGGGCGGTGAAGCGGCAGCTAAACCTCCCATCATGTCTGGACCAATGGTTGGCACTGCCAGTGTGACTCCATATGCATCTTATGAAGGACAAAAACATCATTCGACCATCATACAGCACAATGATGGACCCAGCAGCAGGGTTTATGACAGTCCTGGGAATGCTGTTAACTCAGTACCCGTGCCAGCCCGGGCAGCACCCTCTGTCAGCCCGCCTGGCACATGGGCATCAAGAAGCGGGTACCCCTCCCAGACACCATCTCCCTTTTCAAACAGTTCCTCCTCTTGTAGCTCACCCGGAGCAGGTCAGAATCATTCCCCTGTGGGCTTTCTTCAAATCTCAGCAAAGTCTCCTTCCCAGTCGCCCACAGGGACATACAGGGACGCATTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6404
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110395 Nonsense 85 544 1 8
Genomic Location (Zv9):
Chromosome 16 (position 3933065)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 3090977
GRCz11 4 75175154
KASP Assay ID:
554-4531.1 (used for ordering genotyping assays)
KASP Sequence:
TTTGGCAGCAAGGATCAACGGGAGTCTTTCTAAAGTGTCGGATAACACAT[T/A]GTACACCAAAGACAGACCACCCATCAATACTTACAGACARGGCGGTGAAG
Long Flanking Sequence:
ACTTAATATCATTACTGCTGGTCTGCTGCTTGACTGGATTTAATCTGCTTCATGTGATGTTTACGGACTCTTCACTTTTATTGTGCAGTTTTGAGTCTTATTTGTGGTTCTCCACAGGTGAAGGAGTTTGAACAGCTGTTCCCCGTCAGTTTTCAATGGTTTGACTTTATTCACCGCTGGAGACCCTGACAGAAGCCACTGAAAGACTTACTTTGTTTAGTTTTAGTTCGAGTTTTCAGTCACAAACATGGATAAATACGACGATTTGGGACTAGAGGCGAGTAAGTTCATTGAGGACTTGAACATGTACGAAGCGTCGAAGGACGGTTTATTTCGCGTGAAGAGGGACGCGGGAAACAACCCTGATTTTGAAGAAACCAGGAAAGTTTTTGCCTCAAAAATGACCAAAATACACATCCAGAAGCAACAGGAGGAGATGGCAAAAACCAGTTTGGCAGCAAGGATCAACGGGAGTCTTTCTAAAGTGTCGGATAACACAT[T/A]GTACACCAAAGACAGACCACCCATCAATACTTACAGACAGGGCGGTGAAGCGGCAGCTAAACCTCCCATCATGTCTGGACCAATGGTTGGCACTGCCAGTGTGACTCCATATGCATCTTATGAAGGACAAAAACATCATTCGACCATCATACAGCACAATGATGGACCCAGCAGCAGGGTTTATGACAGTCCTGGGAATGCTGTTAACTCAGTACCCGTGCCAGCCCGGGCAGCACCCTCTGTCAGCCCGCCTGGCACATGGGCATCAAGAAGCGGGTACCCCTCCCAGACACCATCTCCCTTTTCAAACAGTTCCTCCTCTTGTAGCTCACCCGGAGCAGGTCAGAATCATTCCCCTGTGGGCTTTCTTCAAATCTCAGCAAAGTCTCCTTCCCAGTCGCCCACAGGGACATACAGGGACGCATTTCAGGTTAGCCCTGGTCTGCACTCCCAACCCATCTCTGCCCAATTGTCTGCCACTCAAAATGGAGCAGATCATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36020
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110395 Nonsense 223 544 1 8
Genomic Location (Zv9):
Chromosome 16 (position 3933480)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 3091392
GRCz11 4 75174739
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCTTCAAATCTCAGCAAAGTCTCCTTCCCAGTCGCCCACAGGGACATA[C/A]AGGGACGCATTTCAGGTTAGCCCTGGTCTGCACTCCCAACCCATCTCTGC
Long Flanking Sequence:
ATCCAGAAGCAACAGGAGGAGATGGCAAAAACCAGTTTGGCAGCAAGGATCAACGGGAGTCTTTCTAAAGTGTCGGATAACACATTGTACACCAAAGACAGACCACCCATCAATACTTACAGACAGGGCGGTGAAGCGGCAGCTAAACCTCCCATCATGTCTGGACCAATGGTTGGCACTGCCAGTGTGACTCCATATGCATCTTATGAAGGACAAAAACATCATTCGACCATCATACAGCACAATGATGGACCCAGCAGCAGGGTTTATGACAGTCCTGGGAATGCTGTTAACTCAGTACCCGTGCCAGCCCGGGCAGCACCCTCTGTCAGCCCGCCTGGCACATGGGCATCAAGAAGCGGGTACCCCTCCCAGACACCATCTCCCTTTTCAAACAGTTCCTCCTCTTGTAGCTCACCCGGAGCAGGTCAGAATCATTCCCCTGTGGGCTTTCTTCAAATCTCAGCAAAGTCTCCTTCCCAGTCGCCCACAGGGACATA[C/A]AGGGACGCATTTCAGGTTAGCCCTGGTCTGCACTCCCAACCCATCTCTGCCCAATTGTCTGCCACTCAAAATGGAGCAGATCATAACATTGGCACCCCTACCCAGGTGTCCCAAGAGGCACCCCAGACCAAGAGCACTGCACCCAATAATCCAGCAATTCCTTCTCCCAAACCAGTGCTCCCTATTGAGTCCCCTCATGAGGAGTCTTTCCATGCGCTCAAACTGCCATGCCCGAGCCTTCATGTACAGACAGATCAGGGGCCATCTGTGGCTGAAATAAAATTAGAAGCTCTAACCGAACGCTTGGAAAAGGAGATGGACACCCAGCCAAACGCTGAGTACTTTGGTAAGCACAACGTGAGCACTGACAGTGTGTTTTTCTGTTTAGCTTTTTAACATCTGCAATTGTATTTAGTAGCATGCTGATTGAAAAACCTTCTGCCTGTTTCCACTTGACCTTCACTCCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10287
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110395 Nonsense 435 544 5 8
Genomic Location (Zv9):
Chromosome 16 (position 3964143)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 3122055
GRCz11 16 3018375
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGGCGCTGGGGAAGTCTTACCACCCAGGCTGCTTCCGCTGCGCCATCTG[T/A]AACGAGAGTCTRGACGGAGTGCCTTTCACTGTGGACACCGAGAACAAGAT
Long Flanking Sequence:
GCTTCCAGCAGTCTGCTGACAAATGCAGTGTGTGTGGACATTTAATCATGGACATGGTGAGTGTGATGAAGCACACTGCATTATTCATGATATCACACCACTGACAGTCAACTGGAGTTTAAAAGAGCTGCTTGGGGTTAAATTCGTCTTATTATGTAGTGCTCTTTACATTGATTAGATGTAATGAATTCCTCATTTACCACTGGCCCAGCAAGCATTTCATTGTGTTAAGTAGATGTTCAAACATCAACGTCTCGGCTAAAACAAGGCTTAATTTTTGCTAAAAAGTAAATATATATATACAGTTAAAGAAAAAAAAGGTTCGCCCAATAGTCTGGCGACACTTCTGGAGCCACTTTGACACAAGAGGAGACTAATCAGATACAGAAAGTGTGGCGCTGTGTGTGTTGCGTGTTAGCATGTGAACGCGTTGTTCCTCCTCAGATCCTGCAGGCGCTGGGGAAGTCTTACCACCCAGGCTGCTTCCGCTGCGCCATCTG[T/A]AACGAGAGTCTGGACGGAGTGCCTTTCACTGTGGACACCGAGAACAAGATCTACTGCGTGAAGGACTACCACAGGTGAGCTGGTGTAGAGCTGCAGGTCCACACACACTGTAAATAAATAGATGATGTATCAATCAAAGTGTTTCTGCAGACTGTTTTAATGATGTGTGTGTTTATAACATGTAGAATTAATTCACTTTACCATTAGAAGCTGGTTATTTTCACACACTGCTGCCACACAACTGGGTTTAAACCCAGAATATAAGTGATTTTTGCATAATAGATGCATAATAGAAGTGAACAGATGCATAAAGTGAGCTATAGAAATTTCCTTCAGCTGATTGTAGATGTGTGCTGTGAGGAATTCTCCGAATGTCTTCCACAGGCATTTTCCTAGCAGTAGCTTGATGTAATGCCATTTTATAGTGAGTTTTATTGCTCTTGAGTGTGTGTGTGTGTGCATGCGTGTGTGTGCAGATTCTTCTCATGCATCCTTAGCCG
Associated Phenotype:
Not determined