Busch Lab

ZMP

phf20b

Ensembl ID:
ENSDARG00000038737
ZFIN ID:
ZDB-GENE-040822-33
Description:
PHD finger protein 20, b [Source:RefSeq peptide;Acc:NP_001004114]
Human Orthologue:
PHF20
Human Description:
PHD finger protein 20 [Source:HGNC Symbol;Acc:16098]
Mouse Orthologue:
Phf20
Mouse Description:
PHD finger protein 20 Gene [Source:MGI Symbol;Acc:MGI:2444148]

Alleles

There are 9 alleles of this gene:

Allele Name Consequence Status Availability
sa13159 Nonsense Available for shipment Available now
sa17914 Nonsense Available for shipment Available now
sa14382 Nonsense Available for shipment Available now
sa15420 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa13159
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056570 Nonsense 54 986 3 18
ENSDART00000121468 Nonsense 54 1030 2 18

The following transcripts of ENSDARG00000038737 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 23 (position 15136167)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 15269046
GRCz11 23 15025123
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATGAAGATGAGAAAGTTCTGATCCACTACAGACAGTGGAGTCACCGCTA[T/A]GACGAGTGGTTCGACTGGAGCAGTCCGTACCTCAGACCSGTRGAGCGAAT
Long Flanking Sequence:
TATGCCTGTCTGTTGTAAAAAACGTAATGACAAAAAATACTAATTAGTGCATCTCTTTCTTACTTCCGTGTGAAGCCATGCTGCCGTTGTACATGGTGTATTCTGAGAAATTTTCTTACCCCTTAGTTGTAAGTGTGGTCCTGAAACATCTTCATTTCAATGGGCTATCTAGCCATTCCCTTAAGCCCTATGCCTTCAAGCTAAAGGGAATTGAGACACCCCTACCCCTTTATGCAAACGCCCCTTCATTACTCTACACGATGAATGTGTAGAGTAATTCTCTTTGTGAACGACTAAGCTTTGTTACTGCAGATCAAATACATACATTTCATATCAAAGCATCATATGGTCTCTTTAAAAGCAAAGGTATATGGCAGATCTTTTCCGATCTGAAGTGGCTCACTGGTGTTTTGTATTGACAGGTACGCAGCCAACATAGAAAAGATCGACTATGAAGATGAGAAAGTTCTGATCCACTACAGACAGTGGAGTCACCGCTA[T/A]GACGAGTGGTTCGACTGGAGCAGTCCGTACCTCAGACCCGTGGAGCGAATCCAGCTGAGGAAACAGGGGCTGAATGAACGACAGTGCGCTTCAGTGAGTACTTCCAGTCAGACCGTGCTGACTCATTCAGAGTCCGCATGGCCGAAGTCACACTCTTACTCATAAATGCTGCAAAATTACATTTAGATCGGTTTCTTTTCCCAGGGTTTTCAGGTCAACCAGAAAGTGCTAGCCAGCTGGTCTGACTGTCGCTACTACCCTGCTAAGATCCTGTCTCGAGACAAAGATGGTGCGTATTCATGACCTTCACAGTACCACATCTGGTTCTACAGGGTCCAGGTGCTGGATTTGTTTGTTTTTACAGAAAATAGATATTGTATGTTATTTATTTTATTTTATTCATTAAAACAAAACATATAGAGTCGAGGGCAAAATATTTTGCTCTCCTATGCAATATTTATTATTTTTCAAATATTTCTTAAGTGATATTTAAGGGTTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17914
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056570 Nonsense 233 986 6 18
ENSDART00000121468 Nonsense 233 1030 5 18

The following transcripts of ENSDARG00000038737 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 23 (position 15133150)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 15266029
GRCz11 23 15022106
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACGATTCAGAGGTGAGTTCTGCTGAGCACCAGCCCAGTGAAGACCAGAAC[C/T]AGCCCAGTGAAGACAAGACCGAAAACCTGGAGAATRGAAATGTAGAGATT
Long Flanking Sequence:
TGCACCCAACTTTCCAGTAGTTTTGAGCTGCGTTTTTTTATTTTTTATTTTTTTTATGATGTTCTAGATTTCTACACAGTGAAATTTTTTGATGGGATCATCAAGACAGTGAAGGGAATTAAAGTCAAGCCGTTCCGTAAACAGGTAAAAAGTAATTCCCTTATCTGTAATAACCAGGCCATTCATTTAAACAACGTTAATTAGTGTGTTTTGATCTACAGAGCTCTGATGGAAGGAGCAATCAGCAAGCTCGAAAGCGTGCCGATCAGAACGAAAAAGAATTGAAACCCAAGGAGAATGGAAACAGCCGGCACAACAGCTCGAGACACAGCGTATCAGACCACGATGGAGAGAGCGAATCAGAGGCGGACGAAGACACCACAGTGATGGATGAGTCCACAGACCTCCAGAACGGCGGAGAGAAAGAAAGCACAGAAACGAAGATGGTAAACGATTCAGAGGTGAGTTCTGCTGAGCACCAGCCCAGTGAAGACCAGAAC[C/T]AGCCCAGTGAAGACAAGACCGAAAACCTGGAGAATGGAAATGTAGAGATTAAAATAGAGGAGGAGGAAGAAGAAGAGATGGATGGAGGACAGGAGGAGGCTAAAGTACTTCATAATGGCATTGACAAGAACGATGAGCACAAGGGCGAAGCATCGGACGAAAGTCCTAGTTTGCCCAAGAGGACACGGAGCAGGACGGCAGATGGTGAGTTTGGTTTGGAGGAACATGCTGGTGTTAGATCTGAATTTTTGATTTGATTATGATTCAGACCCAACAGTTTCAACCTCTCTCACGCGCCAACAGATAGCAGTTCATAAGTAGCAAGTAGAGAGGGAGACAATATTAGTGGATGAGACGGTCCACACAAATAAAAGCTAAATGAGAGGTTTTGTAATGATCAATAAGATATTAATAAGAACACTCCACATTATTATTATTATTATTATTATCATTTTGGAAATAGGTTCATTTTACAACTCCCCTAGAGTTTAACAGTTAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14382
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056570 Nonsense 580 986 13 18
ENSDART00000121468 Nonsense 624 1030 13 18

The following transcripts of ENSDARG00000038737 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 23 (position 15117767)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 15250646
GRCz11 23 15006723
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGTGATGTGTTGTTGTTGTGTCCTCCAGGTGAAGACAGCAGCAGTGATT[T/A]GTCCTCGGACAGTCCAGTATGGAGTGAGGACGAGTCTGACACTGAGCTGG
Long Flanking Sequence:
ATGGACAAAAGTTGTGGAAACAGTGTGCAATAAACTTTAACTGAAAAAATAGTTTGTTTTTGTAAACTTCTATTAGACGATTTGCTTCAACATTTGGAGTAGCTTTCCTTTTGTTGACGTCAACAGCTGATCTTCTGATGCTAACCTAAGGGTTTCCATAGCAACTGCATATTAATCCCCTTTCTTACCATTACCGTTGCTATGAGGGAATGATACGCCAAAAAAGCCTCTTCATTTCAGTAGGAAGTACATCAACATGCTGAAATAAAAGTCTCAGCAACTTCCAGGTCATGCTGACTTTATTGTATGATACGACTAAAAAGTGGTCAAAACTATTGAGATAAAAATGTTCTCAATTGATAAGAGTAGATGCTTGAACCTGGAAACCGTATCTTGTACGGCTCAACTTAGGAAGCAGGATATAAAAAAAGAGCTGAAATCTTCTGCTGAGAGTGATGTGTTGTTGTTGTGTCCTCCAGGTGAAGACAGCAGCAGTGATT[T/A]GTCCTCGGACAGTCCAGTATGGAGTGAGGACGAGTCTGACACTGAGCTGGATCTGAACGTCCCCCTCTCGGAGCAGGGGGTGGAAACAGTCACTCACAGCTCTGAGATCGTACGCTGTATTTGTGAAGTGCAGGAGGAGAACGACTTCATGATACAGGTCAACTACCACCCTCTGAATCTGCTTTTGACTTTCTTTTTTCGTTCGTTATGCTTTTAATATCATTTTGAAGAGTGTTTGTTTTTTTCTGTGAATTTCTTTTTCTAGTTTTTACATTTATTATGGCAACTGTTATGTTGAACATTAAACATACAGTACTATGAAACAATATTTTGAACTTTCACACATTTTAACATATCGCAATGAAATTTTTTGAAATGTATTCATAATATTGTTTCATAATACTGTTTAAAGACAAATCTGAGTTTGCTTTGCCTAAATAAATGTATCAACTGTGCACTATATTAATATAAGCTACATTAGTAATAGTTGTAATAATAAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15420
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056570 Nonsense 648 986 14 18
ENSDART00000121468 Nonsense 692 1030 14 18

The following transcripts of ENSDARG00000038737 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 23 (position 15114580)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 15247459
GRCz11 23 15003536
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGTGTGACGAGTGTCTGTGCTGGCAGCATGGGACRTGTATGGGTCTCTA[T/A]GAGGACAGTGTGCCAGACAGTTACAGCTGCTATATCTGCAGAGACCCACC
Long Flanking Sequence:
TTTTTTTTATTTATCTCTGTAAAAGCTAAATACAAACAAAAAGTGAACATTGAACAAAAAGTGAACATTTAATTGTTCTATACATTTTTATTTAAAAAAAAGTAATAAGAGCCTGGAGGTATTATAGACTTTGCTAATTCAGTTTGCAGACATTTGTAGGTACAGACATCTATTGTGTGCATTCTTGGCAGTTTTTCCTGTCTTTTTAATATTGTCCATATCAATATCGGAATTATATCATATTGACCGAAATAAAGAAATATATTGTAATATAATTTTTTGCCATATCGTCCAGCCCTAATCTCATGATTATTATTATTATTATTTTAAGTGTTCCAGGAAAGATTTGTTTAGTATATAAACTATTGTTTAATGTAAAGTATATAAACTCCATTTCATTTAGTGATGATTAGTGATGGTCTTGGAGATTAAAAGATGTTTTGCTCTCTGCAGTGTGACGAGTGTCTGTGCTGGCAGCATGGGACATGTATGGGTCTCTA[T/A]GAGGACAGTGTGCCAGACAGTTACAGCTGCTATATCTGCAGAGACCCACCAGGTGAGAGACTTGATCTATCTCACTTTAGCATATATGATCTTTTTCCACCTTTTTCTGTATTAAACAGCTGCATTTTAAAATATTGAGTTGAAATTTTGGTTTAAGGAACTCCCATTCAAAACAACTGAAATCACTTCATATAATCCATATACAGTGGGGACTGTGCTTTATTTTTATTTGTCACGAAAATAAGGTTACACTTCGTATTTTAATGTGACATTAATATCACAAGTATATCTGTGGCCAAAGTCCTGTCAAGTTCACTGTGTTTTGTTCCTCCAGATTGTAGGGATAGTATACAGTTCAACCCAAAGAATGACCAGTCTGGTAGATGAAGAAGAGCCGGAGTCAGAGATTTAAATAAATAAATCAAGTTTACTGAAGATCGTTTGCAGTTTCATCCGCAGAAGCCAGCTTCAACATTCGCAATGAGTTCCTAGGCCACTCT
Associated Phenotype:
Not determined