ZMP

prpf38a

Ensembl ID:

ENSDARG00000039213

ZFIN ID:

ZDB-GENE-040801-225

Description:

Pre-mRNA-splicing factor 38A [Source:UniProtKB/Swiss-Prot;Acc:Q6DHU4]

Human Orthologue:

PRPF38A

Human Description:

PRP38 pre-mRNA processing factor 38 (yeast) domain containing A [Source:HGNC Symbol;Acc:25930]

Mouse Orthologue:

Prpf38a

Mouse Description:

PRP38 pre-mRNA processing factor 38 (yeast) domain containing A Gene [Source:MGI Symbol;Acc:MGI:1916

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa14323	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa14323

Status:

Available for shipment
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Availability:

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Mutation:

T > G

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000057290	Nonsense	30	313	1	10

Genomic Location (Zv9):

Chromosome 6 (position 33629149)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	6	33946814
GRCz11	6	33931504

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GGAACAAACCCTCARTATCTTGTGGAGAAGATTATACGGACRCGTATTTA[T/G]GAGTCTAAGTACTGGAAAGAGGAATGTTTTGGACTTAMAGGTRAGACCGA

Long Flanking Sequence:

ACCATCTTCTTTATGTTTTAAACGTCACAATGGTTTGCTATGTACACAACATTAAATCCCCATCGCCTCTCTTTCTTACTTACCAGGCTATTAAGTGTTGCAACTGCACCAAATATCCGTGGTAATATGTAGAACACTACTCCGTCTCGGTCACACTATGAAACCCGAAAATTAAAACTGAAATGTGAGTGAAATAAAACGCATCTTACGACACAACGGAGAGCAAAAGCACACACGACACACAACTTTTTCGCGCGTAGATGACGTATGAAGGTTTTTTGATTGGACAGTGAAAAACTGCTTGACTTTGCGGATGTGACGCACGCTTTACCCCCGGAAGTCATTCTTTTGTATTTCTCCATGGCACATTAGCGTCCCGTTGATTCGTTCGTTCTTTTATAGTTTTAAACCATGGCTAACAGAACGGTAAAAGATGCCAATAGCGTACACGGAACAAACCCTCAATATCTTGTGGAGAAGATTATACGGACACGTATTTA[T/G]GAGTCTAAGTACTGGAAAGAGGAATGTTTTGGACTTACAGGTGAGACCGAGAAGTCTGAGGCACTGGATACTGTATTTAATAAGGTGGAACTAGAAGGAACAATAGTACTTATATTTATAAATGTATTCGATCTATTAGTATGCTTTACTGTACCTGTTTCATTGCATTGTAAAGTTGACGCGTTGCTCTTTGTTATTTATCTGCTCCACAAGTAATGTGACTTAAAACTGAGGTATTCGGACAGTAGTAAGTTACAATTTATGTACTTGCCTTCAATTTCAGATCATTTATTTAACAATAATAGTTGGAATTAGGTTAAAGTTGGTTTTGTATTCAGACATTCATACTTCCACATTAATAACATAATTTCAGAAAAGTGTTCCTTTAAGTTCTAAATAGGGAAATCATATAATCAACCAATGAGTATCAAAGCACAACATTGTTTACAGTTAATTAAATAGTGCTTATGTTGTGTTGAAGTCATACTTGCTTGCAATTT

Associated Phenotype:

Not determined