ZMP

valopb

Ensembl ID:

ENSDARG00000054181

ZFIN ID:

ZDB-GENE-040724-41

Description:

vertebrate ancient long opsin [Source:RefSeq peptide;Acc:NP_001103750]

Human Orthologues:

OPN1LW, OPN1MW, OPN1MW2, OPN1SW, RHO

Human Descriptions:

opsin 1 (cone pigments), long-wave-sensitive [Source:HGNC Symbol;Acc:9936]
opsin 1 (cone pigments), medium-wave-sensitive 2 [Source:HGNC Symbol;Acc:26952]
opsin 1 (cone pigments), medium-wave-sensitive [Source:HGNC Symbol;Acc:4206]
opsin 1 (cone pigments), short-wave-sensitive [Source:HGNC Symbol;Acc:1012]
rhodopsin [Source:HGNC Symbol;Acc:10012]

Mouse Orthologues:

Opn1mw, Opn1sw, Rho

Mouse Descriptions:

opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan) Gene [Source:MGI Symbol;Acc
opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) Gene [Source:MGI Symbol;Acc:
rhodopsin Gene [Source:MGI Symbol;Acc:MGI:97914]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa14318	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa14318

Status:

Available for shipment
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Availability:

Order Allele From ZIRC
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Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000076334	Essential Splice Site	307	392	5	5
ENSDART00000142089	None	None	321	None	4

Genomic Location (Zv9):

Chromosome 12 (position 30560755)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	28897692
GRCz11	12	29012594

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

ACATNNNNNNGACCTCTGATCCTTATTTACTTTCAATCTAACACTCTTTCTYTTTA[G/A]TTCAGGAAGTGCTTGATCCAGATGTTTAAAGGAAACGGCACGGCCCTGGA

Long Flanking Sequence:

TTTGTTTCATCCACAGATGATCGGATTAATGGAAATCCACCTTTATGCAAGATGTTAGCTGGGCCTAAATTGAAGAATTTAATCAGGAGCTGTTTGAAAAGCACTGAATTACATGAGCATTTATACTACACAAGTGAATCAAATCAAACGTTCATTCAAGCTTCCTCTGGAAACGGTTGGAAGTGGTCAAGCTTAAAACCTGTACATTTGTATTTACCATTGTCCACTTCTGATAGGGTCAACAAAAGCATATCTTCATACATGTTTTAAACATAATCTAACATTAATATCCAGGTCAGTAGGTCTGTTTGAACTCTTTCAATCACATAAGCATTTATACAACAAAGGTGAATCAGTCAAATGTGTTTCTGCAAATGGTCATAAATGGACAAGCTCAAGAAGTATATACATCCCTGTTATCAGATCAACAAAAACTCATATTGATATCAAACATGACCTCTGATCCTTATTTACTTTCAATCTAACACTCTTTCTCTTTA[G/A]TTCAGGAAGTGCTTGATCCAGATGTTTAAAGGAAACGGCACGGCCCTGGAATCCACCAATCTGAACCAGACATCAGACAAAGGGCCGATCACAGCCACAGCAGACACTCACCTCGGAGAAATGTCTACAATCGCTGCTCGCGTGCCCATGTCTATGTGCAACATGGAGAAGAGCGAGGAAGAAGAGGAGGAGCCAGAGCAGAGCGGGAATGGAGGTCCAAAGCAGCTCCCTTTATCAGATAGTCGAGTGTGTCCTTTGTAAACAATGACTAGTCTAACTAAATACATGTAAACCCTAACCGTCATCATCGAGTAGACTAAAATGTTGTCTTACTGAAGCATAAATCCAGCAGTTGTTACCTCTATTGGATTGCATATGTTAGAATGTATGGTGTTTTTGTATGTTGTTTGTGTTTCTTTATGTTGTGGTGATCTGCAGTCTTGGCGAATCCGTAAATGGCTCAGTATGGCATCATAACCTTACATGAACATAAAAGAGAC

Associated Phenotype:

Not determined