ZMP

slc40a1

Ensembl ID:

ENSDARG00000000241

ZFIN ID:

ZDB-GENE-000511-8

Description:

Solute carrier family 40 member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9I9R3]

Human Orthologue:

SLC40A1

Human Description:

solute carrier family 40 (iron-regulated transporter), member 1 [Source:HGNC Symbol;Acc:10909]

Mouse Orthologue:

Slc40a1

Mouse Description:

solute carrier family 40 (iron-regulated transporter), member 1 Gene [Source:MGI Symbol;Acc:MGI:1315

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa14190	Nonsense	Available for shipment	Available now
sa41502	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa14190

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000000250	Nonsense	114	562	4	8
ENSDART00000128567	Nonsense	114	255	4	7

Genomic Location (Zv9):

Chromosome 9 (position 42178867)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	9	41304037
GRCz11	9	41105824

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

ACAGTGCTGTCATTCTCTGTGGTGCCCTTTTGATGGCTGTTTTCCAGTTC[A/T]AACAACAGCTTTCTAGCATGTATGATGGATGGTTGCTGGTGAGTATTTAA

Long Flanking Sequence:

GTCCATACAGTAATAATTATATAGCAATCACAAAATTATCTGGACTGCTTCATTGTGTCATTATGTTACAGGGGGATCGGATGTGGAATTTTGCTGTGGCTGTGTTTCTGGTGGAGCTGTATGGCAATAGTTTACTCCTGACAGCCGTGTATGGACTGGTGGTCGCGGGGTCCGTGCTCTTACTGGGCGCTATTATTGGTGACTGGGTTGACAAAAACCCCAGACTAAAAGGTAAACAAGGCAAACTACAGATGCATGCATATATATATATATATATACACACACACACACACACACACACACACACACACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATAGAGTGCATGCACCATTTTTACAGTCTGAATTTCTTTATTAATTTCAGTGGCACAGACATCTTTGGTTGTCCAGAACAGTGCTGTCATTCTCTGTGGTGCCCTTTTGATGGCTGTTTTCCAGTTC[A/T]AACAACAGCTTTCTAGCATGTATGATGGATGGTTGCTGGTGAGTATTTAAAATGATATGACCGTGTGTTTCCTAGTAAAGCTCTGACACCATTTAGCAGTATTTGCTGAATGAGTAAATAATTCTCAAAATCACACACACAGTATTACTATAACCCTTATTTATGCACTTAGAAATCCTTCATTTCCAAAAGCAAAACATGCAATTCTCACACCTCTAGCTTTGTTTGTAACTTCACAGTTGACCTTCTGTAAATGGTTCATCATTAAAACTAAAATCTTACTCATTGTCTTCCTTACTCTGTGCACTTTTACTAAAGAATGGGTAATAAAATAATGTTTTTAGTGAGGCTTTTAATTAATTTTAGGCAAATTTTTACTTCTTTTTGAAAGTATTTTATCTTATTGTTGGCTGTGGCAGACAATTTCTATATAACAAGAAATTCAGAGCTCCTCAAAGGGACAGTTCACCCCCCAAAAATAAAAATTCTCATTATTTACT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa41502

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000000250	Nonsense	279	562	7	8
ENSDART00000128567	None	None	255	None	7

Genomic Location (Zv9):

Chromosome 9 (position 42182399)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	9	41307569
GRCz11	9	41109356

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCCCAACTGATGACTGAAAGCTCCGAGACCAAGAAGGACACCGGCTGCTG[C/A]TACCAAATGGCAGAGCCCATCCGTACCTTTAAAGATGGCTGGGTAGCCTA

Long Flanking Sequence:

CATCACATGACTGTGTGAGACCTATAGAAGACCAAATAAATGACCTCTCTCTACAGAAATTTAATATATGAAGCAGTAGCTCGACTTTTCTTTTTTTTTAATGTCTAATCCTCTTGTTTAATCCAGCTTATTTTCGCAGCACCGTTCGACAGAAATTGGCAAGTTCAAACTCTAGTATGACCACGACTTCAATCTGCAAACATTTCACATTTAAAATGAGTTCTGACGATTAAGCTACTTTCTCGCTATCATTTGAAAGTCGTTGATTCCATAGCAAACGATTAAGTCGTCTGTACCTTATTTATGTTAAATGCCTTTCATTGTGCAATTACTTTAGTATGCAATGCTAACAAGAAGGTTGACACTTAAATCTGACTCAGTTATTTCACTTTTGTGTTTTTCTAACTCACTGTTTCAGAAATTGGAAACACTGAAAGCCCGGTCGAAGCCTCCCAACTGATGACTGAAAGCTCCGAGACCAAGAAGGACACCGGCTGCTG[C/A]TACCAAATGGCAGAGCCCATCCGTACCTTTAAAGATGGCTGGGTAGCCTACTACAATCAATCCATCTTCTTCGCCGGCATGTCTCTGGCTTTCCTATACATGACCGTTTTGGGCTTCGACTGCATCACCACAGGCTATGCATACACTCAGGGCCTGAATGGCTCTGTGCTCAGTCTCCTCATGGGAGCCTCAGCTGTATCTGGGATCTGTGGGACAGTGGCCTTCACCTGGATCCGAAAGAAGTGCGGCCTCATCAGGACGGGCTTCATTGCTGGAGTCACCCAGCTGTCCTGCCTCACGCTGTGTGTAGCATCTGTCTTCGCCCCTGGCAGCCCTTTCGATCTCAGCGTCTCGCCCTTCGAAGAGGTCTTAAGACATCTGTTTGGAGACAGCGGCTCGCTGCGTGAGAGTCCTACATTCATTCCTACAACTGAACCCCCGATTCAGGCCAACGTCACCGTTTTTGAGGAAGCCCCCCCAGTAGAGTCCTACATGTCTGT

Associated Phenotype:

Not determined