ZMP
si:dkey-22i16.2
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC100001558 [Source:RefSeq peptide;Acc:NP_001139095]
Human Orthologue:
CNGA1
Human Description:
cyclic nucleotide gated channel alpha 1 [Source:HGNC Symbol;Acc:2148]
Mouse Orthologue:
Cnga1
Mouse Description:
cyclic nucleotide gated channel alpha 1 Gene [Source:MGI Symbol;Acc:MGI:88436]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa14137 | Essential Splice Site | Available for shipment | Available now |
| sa18298 | Nonsense | Available for shipment | Available now |
| sa4861 | Nonsense | F2 line generated | Not yet available |
| sa6600 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa14137
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000048225 | Essential Splice Site | 10 | 547 | None | 3 |
| ENSDART00000134649 | Essential Splice Site | 160 | 697 | None | 7 |
Genomic Location (Zv9):
Chromosome 1 (position 44279224)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 43195540 |
| GRCz11 | 1 | 43896704 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCATAATCACATTCCCTGTCATGTACAATTGGACAGTTATAATTGCACGG[T/C]AATAATCTGATGTTCATAAGATGAAGAACAYAAATAGAATACAWAAAAGA
Long Flanking Sequence:
GAAAAAAGAGAAAAAAGAAAAGAAGGAGTACGTAGAATACCTGAACAAATCAGTCTATAAACAATGTCCAAATGTTTTATGGTATTAACCTGTGTGTCATCCTGAAGGAAAAAGGAAAAGAAAGAGAAGAAAGAAAAGAAGGAGAAGAATCAAAAGAACGAGAAGCAAAAAGATAATGAGAAAGAAAAGGAAAAAGAAAAAGAGAAGGAGAAGGAAAAAGAAAAGGAGAAGGAAAAAGAAAAGGAGAAAGAAAAGGAAAAGGAGAAAGAAAAGGAAAAGGAGAAAAAGGAAGGGTTGGTCTCATGCTTTTTATTAGCCGTTTCTAATCTGTGATCATCAAAAGTTCAAAGCAATCACCGTTGATTATTTCTCATGTCAACTTCATTTTCTCCAGGCCCAAGGAGGTGTTTGTGATTAACCCCGCGGGACTTCTGTACTATCAGTGGCTGCTCATAATCACATTCCCTGTCATGTACAATTGGACAGTTATAATTGCACGG[T/C]AATAATCTGATGTTCATAAGATGAAGAACACAAATAGAATACATAAAAGAATCTCCTTTACTCCCTTCAACCCATAAGCTAATAAATGCATCCATACCAGACAGAGCAGATGCATTTTAAATACTCTGGAGTGTATTCATATGATGTCTGTTCACACAGAGCTTGTTTTGAGGAGCTTCAGCATGAATATCTACTGACGTGGTTCCTCCTGGACTACACCTCTGACCTGCTTTACTTGGCTGATATGGCATTCAGAGCACGAACAGGTACTGTACATCACTTGTTATTTCAGATGTTTCAATGAAGGCATAAACCTGTGATACGACTTGTTCCAAACCTGTTTGAGTTTATTTTGTTTGAGATAATTTGAAAAATGCTGGCTGCTAGCACCCATTGACTTCCATAGTATTTTTTCCTACAATGAAAGTCAATGGGTCCCGGCAATCAGCATTTTTCAAAGAGAGAGTAAACAATGAAAGAGGGGAACTACCACTTTAATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18298
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000048225 | Nonsense | 35 | 547 | 2 | 3 |
| ENSDART00000134649 | Nonsense | 185 | 697 | 6 | 7 |
Genomic Location (Zv9):
Chromosome 1 (position 44278989)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 43195305 |
| GRCz11 | 1 | 43896469 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAATATCTACTGACGTGGTTCCTCCTGGACTACACCTCTGACCTGCTTTA[C/A]TTGGCTGAYATGGCATTCRGAGCACGAACAGRTACTRTACRTCACTTGTT
Long Flanking Sequence:
AAGAAAAGGAGAAAGAAAAGGAAAAGGAGAAAGAAAAGGAAAAGGAGAAAAAGGAAGGGTTGGTCTCATGCTTTTTATTAGCCGTTTCTAATCTGTGATCATCAAAAGTTCAAAGCAATCACCGTTGATTATTTCTCATGTCAACTTCATTTTCTCCAGGCCCAAGGAGGTGTTTGTGATTAACCCCGCGGGACTTCTGTACTATCAGTGGCTGCTCATAATCACATTCCCTGTCATGTACAATTGGACAGTTATAATTGCACGGTAATAATCTGATGTTCATAAGATGAAGAACACAAATAGAATACATAAAAGAATCTCCTTTACTCCCTTCAACCCATAAGCTAATAAATGCATCCATACCAGACAGAGCAGATGCATTTTAAATACTCTGGAGTGTATTCATATGATGTCTGTTCACACAGAGCTTGTTTTGAGGAGCTTCAGCATGAATATCTACTGACGTGGTTCCTCCTGGACTACACCTCTGACCTGCTTTA[C/A]TTGGCTGATATGGCATTCAGAGCACGAACAGGTACTGTACATCACTTGTTATTTCAGATGTTTCAATGAAGGCATAAACCTGTGATACGACTTGTTCCAAACCTGTTTGAGTTTATTTTGTTTGAGATAATTTGAAAAATGCTGGCTGCTAGCACCCATTGACTTCCATAGTATTTTTTCCTACAATGAAAGTCAATGGGTCCCGGCAATCAGCATTTTTCAAAGAGAGAGTAAACAATGAAAGAGGGGAACTACCACTTTAATTATTTAATTTTAAGACTTTTAAGACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAACTTGCTGGAATTCCTTATCATGATATAATAAATTTTATTCCAATCATTTATCCCTATCTTGTATGTTTTTTTCTTTTAACCAGGTTACCTGGAACAGGGCCTGCTTGTCAAAGACGAGAAGCTCCTCCTCAAGCGCTACACCGACAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa4861
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000048225 | Nonsense | 87 | 547 | 3 | 3 |
| ENSDART00000134649 | Nonsense | 237 | 697 | 7 | 7 |
Genomic Location (Zv9):
Chromosome 1 (position 44278429)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 43194745 |
| GRCz11 | 1 | 43895909 |
KASP Assay ID:
554-3541.1 (used for ordering genotyping assays)
KASP Sequence:
CCGCCTCGATGTCATCTCTATGCTACCCACAGACATCTTTTACTTTATTT[T/A]GGGGTTGGACTACCCAGAAATCCGCATAAACAAGTTGCTCCGGCTGAACC
Long Flanking Sequence:
GTTTCAATGAAGGCATAAACCTGTGATACGACTTGTTCCAAACCTGTTTGAGTTTATTTTGTTTGAGATAATTTGAAAAATGCTGGCTGCTAGCACCCATTGACTTCCATAGTATTTTTTCCTACAATGAAAGTCAATGGGTCCCGGCAATCAGCATTTTTCAAAGAGAGAGTAAACAATGAAAGAGGGGAACTACCACTTTAATTATTTAATTTTAAGACTTTTAAGACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAACTTGCTGGAATTCCTTATCATGATATAATAAATTTTATTCCAATCATTTATCCCTATCTTGTATGTTTTTTTCTTTTAACCAGGTTACCTGGAACAGGGCCTGCTTGTCAAAGACGAGAAGCTCCTCCTCAAGCGCTACACCGACAGTCTCCAGTTCCGCCTCGATGTCATCTCTATGCTACCCACAGACATCTTTTACTTTATTT[T/A]GGGGTTGGACTACCCAGAAATCCGCATAAACAAGTTGCTCCGGCTGAACCGCATGTTTGAGTTCTTCAAAATCTCTGAAACCATGACCAACTACCCCAACATCTTCCGCATCTGCACTCTGGTCATGTACATCATCATCATCATCCACTGGAACGCCTGCCTCTACTTCTCCTTCTCCAAGTCTATTGGGTTCGGCTCGGATGCATGGGTGTATCCTGCTCTCACCGAGCCTGAGTTTGGAGAGCTCATGCGGAAATATTCCTTCAGCCTCTACTGGTCCACACTTACTCTCACCACCATTGGAGAAACGCCATCTCCAGAGCTCGACTCTGAGTTCTTCTTCCATGTAGTTGACTTCCTGGTTGGCGTCTTGATCTTTGCCACCATTGTAGGTAACATTGCAACAATGATCTCAAATATGAACGCAGCCCAGGCTCAGTTCCAGGCTAGGATTGATAATATTAAGCAGTACATGCATGCACGGCATGTCAGCAAGGAGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6600
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000048225 | Nonsense | 179 | 547 | 3 | 3 |
| ENSDART00000134649 | Nonsense | 329 | 697 | 7 | 7 |
Genomic Location (Zv9):
Chromosome 1 (position 44278152)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 43194468 |
| GRCz11 | 1 | 43895632 |
KASP Assay ID:
554-5153.1 (used for ordering genotyping assays)
KASP Sequence:
GAGCCTGAGTTTGGAGAGCTCATGCGGAAATATTCCTTCAGCCTCTACTG[G/A]TCCACACTTACTCTCACCACCATTGGAGAAACGCCATCYCCAGAGCTCGA
Long Flanking Sequence:
CACACACACACACACAACTTGCTGGAATTCCTTATCATGATATAATAAATTTTATTCCAATCATTTATCCCTATCTTGTATGTTTTTTTCTTTTAACCAGGTTACCTGGAACAGGGCCTGCTTGTCAAAGACGAGAAGCTCCTCCTCAAGCGCTACACCGACAGTCTCCAGTTCCGCCTCGATGTCATCTCTATGCTACCCACAGACATCTTTTACTTTATTTTGGGGTTGGACTACCCAGAAATCCGCATAAACAAGTTGCTCCGGCTGAACCGCATGTTTGAGTTCTTCAAAATCTCTGAAACCATGACCAACTACCCCAACATCTTCCGCATCTGCACTCTGGTCATGTACATCATCATCATCATCCACTGGAACGCCTGCCTCTACTTCTCCTTCTCCAAGTCTATTGGGTTCGGCTCGGATGCATGGGTGTATCCTGCTCTCACCGAGCCTGAGTTTGGAGAGCTCATGCGGAAATATTCCTTCAGCCTCTACTG[G/A]TCCACACTTACTCTCACCACCATTGGAGAAACGCCATCTCCAGAGCTCGACTCTGAGTTCTTCTTCCATGTAGTTGACTTCCTGGTTGGCGTCTTGATCTTTGCCACCATTGTAGGTAACATTGCAACAATGATCTCAAATATGAACGCAGCCCAGGCTCAGTTCCAGGCTAGGATTGATAATATTAAGCAGTACATGCATGCACGGCATGTCAGCAAGGAGCTTGAGGACCGGGTTATCAAGTGGTTTGACTACCTGTGGACAAACAAGAAAGCACAAGATGAGCGAGAAGTACTGAGGTACTTGCCAGACAAGCTAAGAGCGGAGATTGGCATGAACGTACACTTGGATACACTCAAGAAAGTGCGTATTTTTGCAGACTGTGAGGCCGGGTTGCTGATTGAGTTGGTGTTGAAACTTCGCCCTCAAGTTTTCAGCCCCGGGGACTACATCTGTCGAAAAGGTGACATCGGTCGTGAGATGTACATCATAAAGGATGG
Associated Phenotype:
Not determined