ZMP
si:ch73-119d10.1
Ensembl ID:
ZFIN ID:
Human Orthologue:
SH2D1A
Human Description:
SH2 domain containing 1A [Source:HGNC Symbol;Acc:10820]
Mouse Orthologue:
Sh2d1a
Mouse Description:
SH2 domain protein 1A Gene [Source:MGI Symbol;Acc:MGI:1328352]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa30673 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa14067 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa30673
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000108641 | Nonsense | 7 | 108 | 1 | 3 |
| ENSDART00000135662 | Nonsense | 7 | 102 | 1 | 3 |
Genomic Location (Zv9):
Chromosome 14 (position 9218361)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 8822843 |
| GRCz11 | 14 | 9128857 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATTGTCTGAAATACAATGCTTGCAGCACAATGGAATCGCTTTCTGTTTA[T/G]CACGGTGCCATCAGCCGAGAAATGTGTGAGATGCGCCTGAATGAAGCGGG
Long Flanking Sequence:
CAACACAATTTTTCCACTTTCATAAGATACAATACAACAATCTCAAGCATTCTGCAGGAAAATCTGCATAAAGAAAATGTCAGACATTTTTTATAGCAATGACCTGCTCCTTATCACTCTGAGGGCTCTATAAAACCGCATCTATATCTTTACAGAAGGCTGAACTGTGAACTGCGATGTGAGTAGAAGAAAATAATAACATGTGAAACTCTGCATGATTTATTTTGTGTCATTCTGTAATAACTCAATTAAATTTAACATATTAACAACTGCACACTAGTGATGACATGGTGCACCATTAATCTGACAAATGACTTGAAAGATGAGTTTGACATTATCATTTCACTGGCATGAATAGCATGCATTGCATAAATTTTCTTTTTTTTTCTGCTTATTTCCTGCCTTGTTTCGTCATTTCCTGCTCAGGGACACATATCGCTCGCATGTAGTGATTGTCTGAAATACAATGCTTGCAGCACAATGGAATCGCTTTCTGTTTA[T/G]CACGGTGCCATCAGCCGAGAAATGTGTGAGATGCGCCTGAATGAAGCGGGCAAAGATGGGAGCTATTTAATACGGGACAGCGAGAGCGTTGCGGGCGCATACTGCCTCTGTGTTCTGTAAGTTCTCAACAAATCTCAGCATTTTGACATGCAAGCTTATTTCAGCTGGATCAGTTAAAGGGATGGTTCAGCCAAACATTACAAATGCACTCATTATTTACTCTCCCTTAAGTGGTTCCAAACATTTATGAGATTCTTCAGTTTAATATGAAAGAAGATGTTTTGGAGAAAGGTGAGAACAGGTAACCATTGACTTCCATTAACTAACTTTTGTGTTTAACAGAATAAAGAAACTTTGAAAAGTTTGAAATGAGTAAAGGGCGAGTAAATGATGACAGAATTTTTCTTTTTTGGGTGAACTATCCCTTTAAATAAACACTCAAACTGCACTGTAAACATGTAATTAGTTGATTTTACTTTAAAAGTGTGTAAAACTGTTGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14067
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000108641 | Nonsense | 79 | 108 | 3 | 3 |
| ENSDART00000135662 | Nonsense | 79 | 102 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 14 (position 9207248)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 8811730 |
| GRCz11 | 14 | 9117744 |
KASP Assay ID:
2260-7284.1 (used for ordering genotyping assays)
KASP Sequence:
CATTATTATTTTGACAGACAGCTCCAGGACAGACTAAACGCTTGTTCCGC[A/T]RAGTCAAGAATTTGATAAGTGCTTTTGAGAAACCAGGCCAGGGCATCGCC
Long Flanking Sequence:
AATAAAAAGCCATCAGCCTTTACATTTTTCTCATAGGATTGTGACCCCCTGGTGTGTTTACATTAGATTAACAGCACAGCAATAGCGTCAGCTGCAGCAGATTAATTTTATAGCACCAGGTTAAACTTTCTTATACCTTCATGACAATCAAATACATTAAAACTAAATACAGGCCACAGCTGAACATTGAGGATGGTCTCCAAAATCAAGCCAAGAATAGACTTGTGCTAAAAACAGTCTCAATAGGTGAGGTTAATATTAAATAAAACAAATCAGTATAAATTATAGCCTCCGAGGAATGTGGAGGTCGCAAGTCACTGGCATTGCTATTTGGGGGGTTGTGGGCTGAAAAGCTTGGAAACCCCTTTTTTAGACTATTGGTATAAATCAGATATGTAGATGGATTATACTGATGTTGTTGTTGATGTTTGTGTATTCATTTATTATTATCATTATTATTTTGACAGACAGCTCCAGGACAGACTAAACGCTTGTTCCGC[A/T]AAGTCAAGAATTTGATAAGTGCTTTTGAGAAACCAGGCCAGGGCATCGCCATTCCTCTCCTCTACCCCGTAACCATCCAGAAGTCCTACTAGAATGCTCCTCATCATAAGCAAACTGAAACATGTGGACAATTTCAATGTATGGTCACTTTCAAACCCTTTCACAGCCATACATCTGGATTTGTATATACCAAAGGATTTGTATAAAGGGGAAAACGAAAGCCTCATTTTGTAGAGATTGTTTTAGTATGTGAAATTAACAAAGCGTCGTGGAATATGTGTTTAATACTGACTTTAATGGATTTTTAGTACACTATTTTTAAACCATTTAAAATCTGTTATGTGATTATTTGGGTAATTGTTATTACTGAACCTACTTAAAGTGCTGTGTTATTTCAGCCTCAGTGAGTTTTCCAATTCCTAAACTGTCATTTAAAATTTGAACAGATAACTAAATAAATTCTGAAAAATGAACACTTTTGCTGTGCCTTTTCATGAGTT
Associated Phenotype:
Not determined