Busch Lab

ZMP

si:ch211-204d18.1

Ensembl ID:
ENSDARG00000086990
ZFIN ID:
ZDB-GENE-070912-183
Human Orthologue:
LRRC16B
Human Description:
leucine rich repeat containing 16B [Source:HGNC Symbol;Acc:20272]
Mouse Orthologue:
Lrrc16b
Mouse Description:
leucine rich repeat containing 16B Gene [Source:MGI Symbol;Acc:MGI:2448573]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa13993 Essential Splice Site Available for shipment Available now
sa19830 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa13993
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000127934 Essential Splice Site 661 1384 None 40
ENSDART00000141850 None None 152 None 5
ENSDART00000147939 Essential Splice Site 337 536 None 16

The following transcripts of ENSDARG00000086990 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 38551574)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 38881739
GRCz11 2 38847378
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
WCAGGCGTACCGCAGCTCCCCYGACAGGACAGAACAGGCACTGACCAAGG[T/A]GAGAATATTGCTTTTGAAAAAGGGGGMTAGGARGATTTATTCAATATTTA
Long Flanking Sequence:
AGCACTGACTCACTCAACCCTCTGCAAACTTACTAACAGCATGCTGCTACTGGATAAAATAGGATCTTCAGTCCATGCCTACGCGAATCTGTTTTTGATTGCATAGTCTTTCATCACCTCTCCGACCTGCCTGTGATGCTCAATTAAAGTATTGTTCTAGAAACACCTCTTTCTTCCCTGGAGATTTACACCTCTATTATTTAATGTAGAAAGTTTTTATTTTGCATTGAGAGGCCTGTAATGAGTTCTTAGTACAGACTGCTTTGGAAACTGTTGAAAGAAACACAGTGCTCTCTTAAAAAAAAATAACGCAAAGGCTTCTTTCTTGAGACACAAATAAACTGTTTTCTATTATTCATTGCAATGTTTTGGGAAAACTTTAATGTTTCTTGATTCTCTCCTCAGTAACTTCACCCTGCAGTACATGCCTATCCCGCTCAGTGATGTCACACAGGCGTACCGCAGCTCCCCCGACAGGACAGAACAGGCACTGACCAAGG[T/A]GAGAATATTGCTTTTGAAAAAGGGGGCTAGGAGGATTTATTCAATATTTAGGCAGAGGTGGGTAGAGTATCCAAAATCTTTACTCAAGTAAAAGTACAACTACTTGCGGAAATCTTTAAAAGTAAAATAAAAGTAAAAATAAAAGTAACAATTTTAAAAGTTACTCGAAAAGGAGAAAAAAAGTACCTGATAAAAAAAAATGACTCAATACTTACTAGTTACTTTTCATTTTATATACAAATATATATATATATACACACACACACACACACACACACACACACACACACACACACACACACACACACACACATTTTCATAGTATTTACTATATTTTTTCTGAAGATCTTACTTGTTTTATATCAGCTAAAATAAAAACAGTTCTTAACTTTTTTAAAACTATTTTAAGGTCAAAAGTATTAGTCCCCTTTAGCAATATTTCTTTTTATTGTCTAAGAACAAACCATCATTAATTAACATAACTTGTCAAATTAACCTGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19830
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000127934 Essential Splice Site 831 1384 27 40
ENSDART00000141850 None None 152 None 5
ENSDART00000147939 Essential Splice Site 507 536 15 16

The following transcripts of ENSDARG00000086990 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 38565601)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 38895766
GRCz11 2 38861405
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGCACCGCTCTGATGGAGAGAGCGGCGCAAGACATCAACAGAGCTCTGGA[G/T]TAAGAAACACTATAGGGCAGGGGTTCCTGGAGATCTACCTTCCTACAGAG
Long Flanking Sequence:
CTTATTAGTTCATAGCCCTTTTAAAAGCTCTCTCACCTGCTTGACTCGTGTTCTCACAGCAGTCAGCATGAGAGAGAGTGCAGTCATGACTGGTTTATGAATGATGTCTGCTCTGTCCTCTAGCTGTACCCCTCGCTGTGTGAACTGGCCCATGTGTTGTCCGTAGACGGGCCGGTGAGACAGAGACTAGACTCTCTGGCAGGAGAACTTGCCAAAGCTGCTGATAAAGAACTACAGGTGATGCCTCCTCTCTCTTTCTCATCCTTCAGACTGATTTGTATCTGCTGTCTTGTTCTGTTGGACTTTAATGGATGATTTGTGCAGGTCATCGTGGACTCCATGGTGTCTCTGTGTCGGGAGCTGTGTCCACTTTCTTGTGCCGCAGCAGAGTGTCTTTCTCCACCACTGTCCTCCATCTCTGAGCGTGTGTCCATCCCTCGTTCATCCATCCGCACCGCTCTGATGGAGAGAGCGGCGCAAGACATCAACAGAGCTCTGGA[G/T]TAAGAAACACTATAGGGCAGGGGTTCCTGGAGATCTACCTTCCTACAGAGTTCACCTCCAACCTCGATCAAACACACCTGAAACAATTAATTAGGACCTGAGCAGCACTTGATAATTACAAACAGGTGTGTTTGATAAGGGTTGCAGCTGAAATCTGCAGGAAGGTAGCTTTCCAGGAACAGGGTTGAGCACCCCTGCTATAGGGGGTTGAGTAGTTGAAGTTCTGAAATTATGTATAGACTATTATTATTATGATTATGATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGTTGTTATTTTAATTTATTTTATTTATTATTGTAAATTTATTTATTTTATTTTATTATAATTTTTATTGATTATATAATTTCATTTAATTTTAATTATTGTTTTATTTCATTTCAATTTTTTACATTTATTATTTTTTATTTTATTTTGTTTTATTAGTATTTTTTAAATATTTTAT
Associated Phenotype:
Not determined