Busch Lab

ZMP

sema3ab

Ensembl ID:
ENSDARG00000042210
ZFIN ID:
ZDB-GENE-991209-6
Description:
Semaphorin-3ab [Source:UniProtKB/Swiss-Prot;Acc:Q9W686]
Human Orthologue:
SEMA3A
Human Description:
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A [Source:HGNC
Mouse Orthologue:
Sema3a
Mouse Description:
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A Gene [Source:

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa23237 Nonsense Available for shipment Available now
sa13929 Nonsense Available for shipment Available now
sa6502 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa23237
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000061886 Nonsense 344 778 10 17
Genomic Location (Zv9):
Chromosome 18 (position 8880919)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 9457895
GRCz11 18 9427085
KASP Assay ID:
2261-1874.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTTTCTCTGTTTGCAGTAATATTTTTAAGGGTTCTGCGGTCTGCATGTA[C/A]AGTATGGCAGATATCAGGAGAGTGTTTTTGGGCCCATATGCCCACCGTGA
Long Flanking Sequence:
AAGTAAACACTACATAACAGAAACAAAAGTAAATCATTTCTGGTTTGTATTTGACAGAATGATTTTGGAGGCCACAGGAGTTTGGTGAACAAATGGACCACCTTTCTGAAGGCCCGTTTAGTCTGCTCAGTTCCTGGCCTCAACGGCATCGATACACACTTTGATGAACTGCGTAAGTATGAAAAACAATGTTTTACTTGTTTAACATGTTTGGTTGACAACTTACAGCACCTCACTCTGATCATTTCCAGAGGACGTGTTTCTCATGAGCTCTAAGGATCCTAAAAACCCCATTATCTATGCTGTATTTACAACATCCAGGTAATAAAACATCCAATTTACACCACAGTATACTGTTATATAACTGCATATTCTGTTATCTTCTATTCAGAGCATGATAATTGTGTTTTAGGTCCCTAAAGATGAACCTGTGAAGCAGTTGGTAATTGTTGTTTCTCTGTTTGCAGTAATATTTTTAAGGGTTCTGCGGTCTGCATGTA[C/A]AGTATGGCAGATATCAGGAGAGTGTTTTTGGGCCCATATGCCCACCGTGATGGACCCAATTACCAATGGGTACCATTTCTGAGTCGAGTACCATATCCAAGACCTGGCACGGTAAGATGGCCATTCAGAGCTAATGTACATCATACCTTTTTTATGGCTCAAATCAAAGTGAAAGGTCTGCTTGTATCCTAACATGTTCTCCCGAATCTGAACAGTGTCCCAGCAAAACATTTGATGGTTTTGAATCAACAAAGGACTTTCCTGATGATGTCATCACGTTTGCCAGAAGCCATCCAGCCATGTACAACCCAGTGTTTCCTATCAACAACCGTCCAATCATAATCAAAACTGATGTGGATTACCAGTTCACTCAGATAGTAGTGGACAGGGTTGAAGCAGAGGATGGCCAGTATGATGTCATGTTTATCGGCACCGGTGAGTTGAATAATGTTTTTTGGTGACGCTGTGCTTTAAATAGTTTATTTTGGTGGTCCCCTTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13929
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000061886 Nonsense 503 778 14 17
Genomic Location (Zv9):
Chromosome 18 (position 8883985)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 9460961
GRCz11 18 9430151
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTYAGGGAAGTCACAGTGTCTTGGCTTTGTCTTTACAGCAACARCTCTA[T/G]CTTGGATCTGCCATCGGGGTTTCTCAGATGCCWCTTCATCGMTGTGACGT
Long Flanking Sequence:
GATAGCTTGAAAAATATTCATGTAGCTCAGCATTTTGTTGACACAGGTGTTATACCGTACACCAGCTAGATTTATCATGTAGCAAAAACTTAACACAGCTCTCAGACTAGGTTACACACACACAAATACACACACATATGCTTAGTTGGCCTCAGTCTACATTACGCAGAGCAGGAGCTGCTGTCACAGTCAGTCACACAACGCGACAACACGAGGTTTTGCCATTAGAGGCCACACACACACACACACACTCACAGCAGCTGCTTTTACATTAAGGAGTGCAGTGTGAGCTCCCCTTTAGGCGGTGTGAATAATCAAGCAGACACTGAGAGCTTATCTAAAGGCATATATAATTAAACAGCTGGGTATGAAACGGTGAAAACTTCCCTTATCCTCAGTCAAGCAGTCATTAACTCTGTCACATCACAACAAAAAACTTTGTGGTTCCTGTTTCAGGGAAGTCACAGTGTCTTGGCTTTGTCTTTACAGCAACAACTCTA[T/G]CTTGGATCTGCCATCGGGGTTTCTCAGATGCCACTTCATCGATGTGACGTCTATGGGAAGGCCTGCGCTGAATGCTGTCTGGCACGTGACCCTTACTGCGCATGGGATGGCTCTCAGTGTTCCCGATACTTTCCAACAGCTAAGAGGTACAATGAGGATACACAGAAACACTCCACAGTTGATCTGAGATGAAGATGACAGATGACATTTTTTCCACAGTGGGCTCTTGAGTTCGTCTTAGGTTTTTTTTTAATACATGCCTATTATAATTCAATGTGTGTGTTTTCTGTATGTGTGTGTGATAACATTTAATTCAAACAAACTTTTAGTAATGACATTGCTATTTAAGGCTCAAAACCAAAACACTATGATATTAATAGAATATCTGTTTTTTTATTTATTATTAATTATTAATACTATTTTACTATTATATTTAACACTAATATTCATTTAATATAAATACTAATGTTGTATGTATATATATATATATATATATATAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6502
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000061886 Nonsense 729 778 17 17
Genomic Location (Zv9):
Chromosome 18 (position 8893604)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 9470580
GRCz11 18 9439770
KASP Assay ID:
554-4618.1 (used for ordering genotyping assays)
KASP Sequence:
TCGATCAGCTCTGCGAACAGGTGTGGAAGAGAGAACGCAAACAACGCAGA[C/T]AGAAAGCCAATCTACTGCACGCCAGCCAATCACACACCAGCCAGATCCTC
Long Flanking Sequence:
TCTTAAATGTTAGTTGTTTAGATCAGTGTCTAGTATGGATCATCAAGCTCTTGTTTATAATTATTTGACTACAAACATTTATCTAATCATACATTTGGGTTAATAGGGTCAACTGCAGCCAAAATACCTGAACAGCTGTTGTCCATAGTATGCTTACAGTGTTGTGTGTCTGTGTTTTGTTTTAGATAAAGTCAGACGAGCGAGTGTTGGGCACAGAACAGGGTCTTCTGATCCGAAGCCTCCATCAGAAGGACTCAGGTGTGTATTACTGCCATGCCGTCGAGCACGGCTTCATCCAGACCCTCCTCCGTCTCACGCTCAACGTCATTCCTGCCGAACACCTGGATGATCTGCTTCACCGAGACCCACCAGACACCAACGATCCCGCCAACGGCAAGATGTGGTACCGCGACTTTCTGTCCCTCATCAATCCGCCGAGCCCCAACAGCGTCGATCAGCTCTGCGAACAGGTGTGGAAGAGAGAACGCAAACAACGCAGA[C/T]AGAAAGCCAATCTACTGCACGCCAGCCAATCACACACCAGCCAGATCCTCCACTCCAGCCAATCACACGCCAAGTGGAAGCTGCTACAGGAAAACAAGAAAGGGCGCAATCGCAGGACCCACGAGATGCAGCGGGCGCCGAGAAGTGTGTGACATGGACACCAAATATATCTATATAAATAAAAAACTTCTGCTGTTCTACAGACATACCGCTGCAGACAGGAAATGGGGAATTTCACTTCCTGTCATGTATGTGTGCAAGAGAGATGAAACTTCATTCACACTATGTATCGAGACTCAAACGGTTTTGAGAGGACGCGAGGATGCCTGTAAATATGACATGAATACAAAACCATACTGTGAAACAGGTTTCAGTCCGTATTAAAACCTGTTTCGTTTATGAGGGAAAAACATGGATGCTGAAAACCACTGTTTAACCTCTGTTTAGCTGAAGCACAACCCCAGTGCATTCTGGATTATGATCTTGTCTGTAATATTATG
Associated Phenotype:
Not determined