ZMP
itga5
Ensembl ID:
ZFIN ID:
Description:
integrin alpha-5 [Source:RefSeq peptide;Acc:NP_001004288]
Human Orthologue:
ITGA5
Human Description:
integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:HGNC Symbol;Acc:6141]
Mouse Orthologue:
Itga5
Mouse Description:
integrin alpha 5 (fibronectin receptor alpha) Gene [Source:MGI Symbol;Acc:MGI:96604]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa13598 | Nonsense | Available for shipment | Available now |
sa44025 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa13837 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa13598
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000018301 | Nonsense | 308 | 1053 | 10 | 30 |
ENSDART00000103275 | Nonsense | 290 | 1035 | 10 | 30 |
The following transcripts of ENSDARG00000006353 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 33713431)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 33573229 |
GRCz11 | 23 | 33499760 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTCCATTCTCAATAGCTCTCTGGATGTGCTGAAGATGTTCACTGGTGAA[C/T]AGGCAAGTTTGATGGCTTTCTGTWTTATTGATGCTTTTCCAAGATTAAGT
Long Flanking Sequence:
TTTGAAAGGAAGTGTTATTATTATACCCTTTATGAATCCATTTCACTTAAACAAATTTCCAAATAGAGCCCTTAAGATTGACTTAGTGCGCCTGTGATCGCCAGAATTCTCTGAGTTCCTGAGGAACCCACTCATTTCCATGTTTCCACTACTAAATCTTTCTCTTTTTCCTCTCTTTGTTTGGCTCGCCTGCGTTCAGACTTTGTGACTGGAGTTCCCAGGGGAGTCAGACTGCATGGACAGGTGAGAGAAAACAGTCACAACATCAACTCTGACATTTAGCCAGAAACATTTCCATGTAAAATATGGACTTGCGTATTCACAGTTTATCAATTTAAAAAAATGTGATAACATTTCTTAAATGTTGTCAAAAGTGATTAGTTTGTTGTTCAATGGTTGTGGTACTTGATGAGCAAATTGTAAAATATGTTCTCTTTTTTTAAAATCAGGTTTCCATTCTCAATAGCTCTCTGGATGTGCTGAAGATGTTCACTGGTGAA[C/T]AGGCAAGTTTGATGGCTTTCTGTTTTATTGATGCTTTTCCAAGATTAAGTGATTACAGGAGATTTGAGATGTTTATTCATGTTTATTTTGTGCTATAACTAGGCCCAAATAAAATCTTCTCTCACGGAAATACAGTTTTTTTGAGCGCATTGTTAAGTCCATTTGCTTTTTTATGTAAATGTGTGTACATTTATACTGTATTTATTAAGGTTTTATATTAATTTCAATAAGATAATAAAACATATGGTAACATTTAGATGATTTGTGTTTAGTATAGTTTGTAAAGCAATAATATCTGTCTTTTGGTAGATATATTGTATAAGTTATACTGTAGCTGTGTTGCCAGATAAGTGATTCTAAGGGCGCACTCACACTATGCTATCTGAACCGTGCCCAGGCCTATTTCCCGGATCGTTTGAGAATTGTGAGTGGTCTGAATCAAGCTCGGCAGCCTGGTTGAAAGAGGTGTGCCAGAGCGTGGTTCACTTGGGCTCAGCTTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44025
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000018301 | Nonsense | 909 | 1053 | 26 | 30 |
ENSDART00000103275 | Nonsense | 891 | 1035 | 26 | 30 |
The following transcripts of ENSDARG00000006353 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 33672033)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 33531831 |
GRCz11 | 23 | 33458362 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGGCACGAACACCACATTGAGAAGCGGGACACGCACAAGGGAGAGCTCT[C/A]GCAACTGACCAATCTGGTGAGATTTCTGAAGTTGTGAAATAAAAGTGATG
Long Flanking Sequence:
CAGGAATCAGCTATAAGACATTTTAGAAGCCTGGATAAACCCCTTTCGGCCCATTTTGAGGACGTCCTGACCAAGTCTAGCGGATTGGTAACGCAAAACTGCTGTTGCATCTGGGACTGTGCTGAATTCTTCCCTGAATTAGCTGTTTGTTCAGTTTCTCATGCCATTTAGGGCGTACTTCTTGGTTTGGAGGAGTGCATGGCTCTGCACAATGGAGAAGTTGAGTAAAATCTGACATCTGTTGCAAAATGCCCCTTGCGTCCAGCTCAACGTGTCCCTCCCAGCTCAGTGTTAGCGTTGAGTCAGAGGGCGTCAGTACAGACTGAACCGTGATGTCAGAGTCCACAGTGTCCAGAAGTGTGTGGTGAATTTCCACTTAATGTTCCCTTCTCTGTTTCTCTCTCTTCAGCTGCAGCAGTCTTCAACAGAGCAGCCTCCTGTACGAGATTCAGGGCACGAACACCACATTGAGAAGCGGGACACGCACAAGGGAGAGCTCT[C/A]GCAACTGACCAATCTGGTGAGATTTCTGAAGTTGTGAAATAAAAGTGATGAAACAAAGCAAAACATGAATAAAACATTAACTCTATTCTGAAAGGGATAGGTTGACTGGATGAGTCCTGTTTTGCAGCTTTATTTTAGTGTTCAATCATCCCACACGAACAAATACTACAGTAAATACTAAAATACTTGAATTCATCTGTTGTGGTAATTCCATAGCTCAGGGGTGTCAAACTCAATACCTGGAGGGCTGCAGCCCTGCACAGTTTAGTTCCAACCCTAATTAAACACACCTGATCAAACTAATTGAGTCCTGAAGGCTTGTTTGAAACCTACAGGTAAGTGTGTTGGAGCAGGGTTGAAACTAAACTGTGCAGGGCTGCGGCCCTCCAAGAATTGAGTTTGACATCCCTGCTATAGCTGCTGTGGTTATACAACAACTATATAATACAAACTAATGATCCATTACTATACTCAGTTTTTGACAACTATATGGTTTATAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13837
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000018301 | Nonsense | 931 | 1053 | 27 | 30 |
ENSDART00000103275 | Nonsense | 913 | 1035 | 27 | 30 |
The following transcripts of ENSDARG00000006353 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 33667088)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 33526886 |
GRCz11 | 23 | 33453417 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTCTTGCTCCAGTGTGGACTGTTGGACTCTBRTGTGTAATGTWGGCCTGT[T/A]GGAGCGAGGGACKAGTGCCATACTTCMTGTTCGCTCACGAATTTGGGCTG
Long Flanking Sequence:
TTGCTACGTTTCAGTGGCATTTGTTTATTTGAATAACAGCTCTCATGAAGGGTTTACAGTGGCTTCTGACAGGAACTAAAAATGCTGTGTGATGAAATACACTCGGCTCCACACAATACCTTCATATTGTCTCAACACAAATTGATTAAGTTAATAGTTTTTACAAATTTAAGTGGATTGAACATAAAACAATTAAGTTATTAAGAATTATTGTGTTTTAGCTCATTTTAAATAACAAACAAGCAGCAATAACATAGAAAACTTCATTATAATCATTATAAATTCCAAAATAGTTTGAATGTTTGGTAAAAATGCAGGAAAAATCTGTGATTTTGTTTGTTTTCTTTACCCTAAAATATTTCTCTTTCTTTTTGACTGAAAAAATAAAATAAGCAAAAGCAAATTTTGAAATTGATGTTACTCCGTTGTATCTCCTTGTCTGTTGTTTTAGTCTTGCTCCAGTGTGGACTGTTGGACTCTGATGTGTAATGTTGGCCTGT[T/A]GGAGCGAGGGACGAGTGCCATACTTCATGTTCGCTCACGAATTTGGGCTGAAACGTTTATGGAGGTGAGCAGAAAGTGTTGTCTCTTGAAATGATTACTAATAGTGCACTGAAAACAAAATGATGGATGCTTTTACAGTCAAATTTTATACTCTGAAATCTCAAATAAGACCCCTCTCCAAGTCCACCTCAATGATTGAACAGATTAAAAATTTAGTGTATAGTGTGGTTATTTCCTGATATATTTTGTAGGTAGTAATGTAGATTTGGTGGTGTCTGTTTAACTCAAGTTGAAGAGAATCAGATGGTGTGTAAACAGGAGCTCTTTTGAGAGACTCCTTACATGCAGCTCCAGCCAATGCAAAGTTTATAAGCCAGTGCATTGAAAATACATTAAGAGAAGTCCTGAGAGCTCAGCGCATTGGAATGTCAGAAAATGTTGGGATCCAGTGAAGCAATACTGCCACCATCTGGATGCGACTAGGACTGTTACATTAAAAA
Associated Phenotype:
Not determined